| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is atzD [H]
Identifier: 146343122
GI number: 146343122
Start: 6571723
End: 6572835
Strand: Reverse
Name: atzD [H]
Synonym: BRADO6319
Alternate gene names: 146343122
Gene position: 6572835-6571723 (Counterclockwise)
Preceding gene: 146343133
Following gene: 146343121
Centisome position: 88.15
GC content: 70.98
Gene sequence:
>1113_bases ATGCCGACCCCCTTGCGCCGCGCTCATGTTCACCGCCTGCCGATGCGAAGCCCCGATGATGTCGGCGCGCTCGAGGCCGC GATCGTCAGCGGCGCGATCGACCCGGCCGGCATCGTCGCCATCCTTGGCAAGACCGAGGGCAATGGCTGCGTCAACGACT TCACCCGCGCCTTCGCGGTGCGCTCGCTCGAAACACTGCTCGGCCGCCATCTTCAAGCCGACGCCGTCCGGCAGATCGCG ATGGTGATGTCCGGCGGCACCGAGGGCGCGTTGTCGCCGCACATGATCGTGTTCGAGGCGCGAACCGGCGACGACGGGCC GCGCGCCTTCGGCACCTCGCTGGCTCTCGGCCGGGCGCGAACGCCGACGCTTCCCGGCGAGCATCTCGGCCGCATGCAGC AGGTCGCGCAGGTCGCCGCCGGCGTGCGTGCGGCGATGGCCGATGCCGGCATCGAGGATCCCGCCGACGTGCACTATGTC CAGGTGAAATGCCCGCTGCTGACGATGGAGCGGATCGAGGCGGCGGAGGCGCGGGGTGCGCGCACCGCCGTGCGTGACAC GCTGAAATCGATGGGATTTTCCCGTGGGGCCTCGGCGCTCGGCGTTGCGGTCGCGCTCGGCGAGCTGGCCTTCGATGAGC TGTCCGATGCTGATATCTGCGCTGATTACAGCCGCTACAGCGAGCGTGCGGCGACCTCGGGCGGCGTCGAACTGCTCGAC CATGAGATTATGGTCGCCGGCATGTCGGCACGGTGGACCGGCCCGCTCGCGATCGATCACGGCGTGATGCGGGATGCGAT CGACATCGAGCCGGCCCGCGCCGCGCTCAGCCGGCTCGGCCTCGATGGCCCCGGCCAGCTGCCGGCGGCGTCGCGCGGCC GGATCGCCGCGGTGCTGGCCAAGGCGGAGGCGGCGCAGAGCGGGAAGGTGCGGGGGCTCAGGCACACGATGCTGGACGAC AGCGACGTCTCCTCCACACGGCATGCCCGTGCGTTCGTCGGCGGGGCGCTGGCGGGGCTGTTCGGCTTCACCGATCTGTT CGTGTCCGGCGGGGCCGAGCACCAGGGACCGGACGGTGGCGGACCGGTCGCGATCATTGTCGAGCGACGCTGA
Upstream 100 bases:
>100_bases GACAAGGCTGGACGATAACACGCCGTGCGGCTGGCGGCAGCGTCGCGCAGAGCGTCGTGATCGCCTAGGGTGGCAGGCCA GAACTTTTCGGAGTCCGTCC
Downstream 100 bases:
>100_bases TCGCGCGGGTATGTCCCGCCGGAAAACTGCGGCAACATTTCAGATGCGACTCATTATCACATGCATTAGGTAATATATTC CTAGTCTGGCCATCGACCGA
Product: cyanuric acid amidohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MPTPLRRAHVHRLPMRSPDDVGALEAAIVSGAIDPAGIVAILGKTEGNGCVNDFTRAFAVRSLETLLGRHLQADAVRQIA MVMSGGTEGALSPHMIVFEARTGDDGPRAFGTSLALGRARTPTLPGEHLGRMQQVAQVAAGVRAAMADAGIEDPADVHYV QVKCPLLTMERIEAAEARGARTAVRDTLKSMGFSRGASALGVAVALGELAFDELSDADICADYSRYSERAATSGGVELLD HEIMVAGMSARWTGPLAIDHGVMRDAIDIEPARAALSRLGLDGPGQLPAASRGRIAAVLAKAEAAQSGKVRGLRHTMLDD SDVSSTRHARAFVGGALAGLFGFTDLFVSGGAEHQGPDGGGPVAIIVERR
Sequences:
>Translated_370_residues MPTPLRRAHVHRLPMRSPDDVGALEAAIVSGAIDPAGIVAILGKTEGNGCVNDFTRAFAVRSLETLLGRHLQADAVRQIA MVMSGGTEGALSPHMIVFEARTGDDGPRAFGTSLALGRARTPTLPGEHLGRMQQVAQVAAGVRAAMADAGIEDPADVHYV QVKCPLLTMERIEAAEARGARTAVRDTLKSMGFSRGASALGVAVALGELAFDELSDADICADYSRYSERAATSGGVELLD HEIMVAGMSARWTGPLAIDHGVMRDAIDIEPARAALSRLGLDGPGQLPAASRGRIAAVLAKAEAAQSGKVRGLRHTMLDD SDVSSTRHARAFVGGALAGLFGFTDLFVSGGAEHQGPDGGGPVAIIVERR >Mature_369_residues PTPLRRAHVHRLPMRSPDDVGALEAAIVSGAIDPAGIVAILGKTEGNGCVNDFTRAFAVRSLETLLGRHLQADAVRQIAM VMSGGTEGALSPHMIVFEARTGDDGPRAFGTSLALGRARTPTLPGEHLGRMQQVAQVAAGVRAAMADAGIEDPADVHYVQ VKCPLLTMERIEAAEARGARTAVRDTLKSMGFSRGASALGVAVALGELAFDELSDADICADYSRYSERAATSGGVELLDH EIMVAGMSARWTGPLAIDHGVMRDAIDIEPARAALSRLGLDGPGQLPAASRGRIAAVLAKAEAAQSGKVRGLRHTMLDDS DVSSTRHARAFVGGALAGLFGFTDLFVSGGAEHQGPDGGGPVAIIVERR
Specific function: Responsible for s-triazine ring cleavage. Cleaves cyanuric acid (2,4,6-trihydroxy-s-triazine) to yield carbon dioxide and biuret [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014086 [H]
Pfam domain/function: PF09663 Amido_AtzD_TrzD [H]
EC number: =3.5.2.15 [H]
Molecular weight: Translated: 38490; Mature: 38359
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPLRRAHVHRLPMRSPDDVGALEAAIVSGAIDPAGIVAILGKTEGNGCVNDFTRAFAV CCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH RSLETLLGRHLQADAVRQIAMVMSGGTEGALSPHMIVFEARTGDDGPRAFGTSLALGRAR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCC TPTLPGEHLGRMQQVAQVAAGVRAAMADAGIEDPADVHYVQVKCPLLTMERIEAAEARGA CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCH RTAVRDTLKSMGFSRGASALGVAVALGELAFDELSDADICADYSRYSERAATSGGVELLD HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHC HEIMVAGMSARWTGPLAIDHGVMRDAIDIEPARAALSRLGLDGPGQLPAASRGRIAAVLA CEEEEEECCCCCCCCEEECCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH KAEAAQSGKVRGLRHTMLDDSDVSSTRHARAFVGGALAGLFGFTDLFVSGGAEHQGPDGG HHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GPVAIIVERR CCEEEEEECC >Mature Secondary Structure PTPLRRAHVHRLPMRSPDDVGALEAAIVSGAIDPAGIVAILGKTEGNGCVNDFTRAFAV CCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH RSLETLLGRHLQADAVRQIAMVMSGGTEGALSPHMIVFEARTGDDGPRAFGTSLALGRAR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCC TPTLPGEHLGRMQQVAQVAAGVRAAMADAGIEDPADVHYVQVKCPLLTMERIEAAEARGA CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCH RTAVRDTLKSMGFSRGASALGVAVALGELAFDELSDADICADYSRYSERAATSGGVELLD HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHC HEIMVAGMSARWTGPLAIDHGVMRDAIDIEPARAALSRLGLDGPGQLPAASRGRIAAVLA CEEEEEECCCCCCCCEEECCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH KAEAAQSGKVRGLRHTMLDDSDVSSTRHARAFVGGALAGLFGFTDLFVSGGAEHQGPDGG HHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GPVAIIVERR CCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1991731 [H]