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The map label for this gene is 146343064

Identifier: 146343064

GI number: 146343064

Start: 6501534

End: 6502742

Strand: Reverse

Name: 146343064

Synonym: BRADO6256

Alternate gene names: NA

Gene position: 6502742-6501534 (Counterclockwise)

Preceding gene: 146343065

Following gene: 146343062

Centisome position: 87.21

GC content: 68.82

Gene sequence:

>1209_bases
ATGACACCTCGCCCCAGCTCCGTCCGACCGTTTCTGATTTGCGCCGCGATCCTCGCGGCGCTTTTGTCTGCCGACGCCGC
CTCGCATGTGCTGCTTGCCAAATCGCCGTTCGGCGCGCCCGCGGGCGAGCCGCAGGTCGGCGGCATCGTCGGTTGGCTTC
TCGCGAAGCAGTCGGAGTTCTACCGGCAGATGTCGGGCGCGATCCGCTCCGCCAAAGAGGACGGCTCGGCGGTGTGGTGG
CTGCTCGCGATCTCCTTTGCCTACGGCATCTTCCATGCGGCTGGCCCCGGCCATGGCAAGGCGGTCATCGCCTCCTATCT
CGTCGCCAACCAGGAGACGGCGAAGCGCGGCATCGTGCTTTCATTTGCTTCGGGCCTGATGCAGGCGCTGGTGGCAGTGG
CGATCGTCGGCATCGGCGCGGTGCTGCTCAACGCGACGGCGGCCACCATGTGCAGCGCCGAGAAGGTGGTGGAGATCGCG
AGCTACGGCCTGATCGCGCTGCTCGGCGCGCGGCTGGTGTGGGTCAAGGGCGCGGCGTTCCTGCGCACGTGGCAGCCGGC
GACGCCGGCGCTGGCGCTGGCTGGTGGGCCGGCGGCTGCGGTGGTGTCGTCGGGGCATGATCACGGCCACGCGCATGATC
ATCAGCATCGCGCGCCTCAAGATCACCATGGGCATGACCACCATCACGGCCACGACCATCATGGACATGATCATCACCAC
GGTCATGCTCACACGCAGGCGGCCGCGGCCCATGGTCACGCCGCTCACGATCACGTCCATCACGATCACGTGCATCATGA
TCACGTCCATGGCGACGATTGCGGTTGCGGCCATTCGCACGGACCCGCGCCGAGCGAGCTCGCCGGTCCCGGCGGCTGGC
AGCGCGGCTTCCAGGCGATCTTCGCGGCCGGCATCCGTCCTTGCTCGGGTGCGATCCTGGTGCTGGTGTTCGCGCTGGCG
CAGGGAATGTTCTGGGCCGGCGTCGCCGCCACCATCGTGATGGGCATGGGCACCGCGATCACCGTCGCCACCATCGCGGT
CATTGCGGTGGCCGCCAAGGACATCGCCCGCCGCCTCAGCGCCGGCCGCGACGGCGGCGGCGCGCTGATCATGCGGGGAC
TGGAGTTCGGCGCGGCCGGGCTGGTGCTGCTGTTCGGCGTCGGCCTGCTGTTCGGCTACATGGCGGCGGAACGCACGACC
TGCTTCTGA

Upstream 100 bases:

>100_bases
GCTCCGTCGCGCAGACCATGAACGAACAGACATTCCTGAGCGGCGGGGCGAACGCCAATTTCGGAATGAACTTCGCCAAC
AAGATCTCAGTGGAATGTCC

Downstream 100 bases:

>100_bases
GCGGGCTTCGTTCAGCGGCTACGCTTCTGCCCAACACGTCCGCCGCGGCATACTGGATGCCCCGCCTGCGCGGGGCATGA
CAGCGACTGCGAGGGCCCGG

Product: putative high affinity nickel transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MTPRPSSVRPFLICAAILAALLSADAASHVLLAKSPFGAPAGEPQVGGIVGWLLAKQSEFYRQMSGAIRSAKEDGSAVWW
LLAISFAYGIFHAAGPGHGKAVIASYLVANQETAKRGIVLSFASGLMQALVAVAIVGIGAVLLNATAATMCSAEKVVEIA
SYGLIALLGARLVWVKGAAFLRTWQPATPALALAGGPAAAVVSSGHDHGHAHDHQHRAPQDHHGHDHHHGHDHHGHDHHH
GHAHTQAAAAHGHAAHDHVHHDHVHHDHVHGDDCGCGHSHGPAPSELAGPGGWQRGFQAIFAAGIRPCSGAILVLVFALA
QGMFWAGVAATIVMGMGTAITVATIAVIAVAAKDIARRLSAGRDGGGALIMRGLEFGAAGLVLLFGVGLLFGYMAAERTT
CF

Sequences:

>Translated_402_residues
MTPRPSSVRPFLICAAILAALLSADAASHVLLAKSPFGAPAGEPQVGGIVGWLLAKQSEFYRQMSGAIRSAKEDGSAVWW
LLAISFAYGIFHAAGPGHGKAVIASYLVANQETAKRGIVLSFASGLMQALVAVAIVGIGAVLLNATAATMCSAEKVVEIA
SYGLIALLGARLVWVKGAAFLRTWQPATPALALAGGPAAAVVSSGHDHGHAHDHQHRAPQDHHGHDHHHGHDHHGHDHHH
GHAHTQAAAAHGHAAHDHVHHDHVHHDHVHGDDCGCGHSHGPAPSELAGPGGWQRGFQAIFAAGIRPCSGAILVLVFALA
QGMFWAGVAATIVMGMGTAITVATIAVIAVAAKDIARRLSAGRDGGGALIMRGLEFGAAGLVLLFGVGLLFGYMAAERTT
CF
>Mature_401_residues
TPRPSSVRPFLICAAILAALLSADAASHVLLAKSPFGAPAGEPQVGGIVGWLLAKQSEFYRQMSGAIRSAKEDGSAVWWL
LAISFAYGIFHAAGPGHGKAVIASYLVANQETAKRGIVLSFASGLMQALVAVAIVGIGAVLLNATAATMCSAEKVVEIAS
YGLIALLGARLVWVKGAAFLRTWQPATPALALAGGPAAAVVSSGHDHGHAHDHQHRAPQDHHGHDHHHGHDHHGHDHHHG
HAHTQAAAAHGHAAHDHVHHDHVHHDHVHGDDCGCGHSHGPAPSELAGPGGWQRGFQAIFAAGIRPCSGAILVLVFALAQ
GMFWAGVAATIVMGMGTAITVATIAVIAVAAKDIARRLSAGRDGGGALIMRGLEFGAAGLVLLFGVGLLFGYMAAERTTC
F

Specific function: Efflux system for nickel and cobalt (Potential) [H]

COG id: COG2215

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 41464; Mature: 41333

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPRPSSVRPFLICAAILAALLSADAASHVLLAKSPFGAPAGEPQVGGIVGWLLAKQSEF
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
YRQMSGAIRSAKEDGSAVWWLLAISFAYGIFHAAGPGHGKAVIASYLVANQETAKRGIVL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHCCHHH
SFASGLMQALVAVAIVGIGAVLLNATAATMCSAEKVVEIASYGLIALLGARLVWVKGAAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LRTWQPATPALALAGGPAAAVVSSGHDHGHAHDHQHRAPQDHHGHDHHHGHDHHGHDHHH
HHCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GHAHTQAAAAHGHAAHDHVHHDHVHHDHVHGDDCGCGHSHGPAPSELAGPGGWQRGFQAI
CCHHHHHHHHCCCHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHH
FAAGIRPCSGAILVLVFALAQGMFWAGVAATIVMGMGTAITVATIAVIAVAAKDIARRLS
HHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AGRDGGGALIMRGLEFGAAGLVLLFGVGLLFGYMAAERTTCF
CCCCCCCHHEEHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TPRPSSVRPFLICAAILAALLSADAASHVLLAKSPFGAPAGEPQVGGIVGWLLAKQSEF
CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
YRQMSGAIRSAKEDGSAVWWLLAISFAYGIFHAAGPGHGKAVIASYLVANQETAKRGIVL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHCCHHH
SFASGLMQALVAVAIVGIGAVLLNATAATMCSAEKVVEIASYGLIALLGARLVWVKGAAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LRTWQPATPALALAGGPAAAVVSSGHDHGHAHDHQHRAPQDHHGHDHHHGHDHHGHDHHH
HHCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GHAHTQAAAAHGHAAHDHVHHDHVHHDHVHGDDCGCGHSHGPAPSELAGPGGWQRGFQAI
CCHHHHHHHHCCCHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHH
FAAGIRPCSGAILVLVFALAQGMFWAGVAATIVMGMGTAITVATIAVIAVAAKDIARRLS
HHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AGRDGGGALIMRGLEFGAAGLVLLFGVGLLFGYMAAERTTCF
CCCCCCCHHEEHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]