| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343065
Identifier: 146343065
GI number: 146343065
Start: 6502739
End: 6503368
Strand: Reverse
Name: 146343065
Synonym: BRADO6257
Alternate gene names: NA
Gene position: 6503368-6502739 (Counterclockwise)
Preceding gene: 146343066
Following gene: 146343064
Centisome position: 87.22
GC content: 62.06
Gene sequence:
>630_bases ATGATCCGTGCCGTTATGGCGGCGCTGCTGCTCATGCTGGGGGCGGGCGCGGCGAGCGCTCATCCCCATGTCTGGGTCAC CGCGACCAGCGAGCTGCTCTATGCGGCCGATGGCACGCTGACCGGCGTGCGCCACGCCTGGACCTTCGACGACATGTTCG CGACCTATGCGCTGCAGGGGCTCGAGACCAAGCAGAAGGGCGTCTACACCCGGGAGGAGCTGGCGCCGCTGGCGCAGACC AATGCCGAGTCGCTGAAGGAATATGCCTACTTCACTTTCATCAAGGCGGATGGCCGCAAGCAGAAGCTCCTCGATCCCGT CGACTATTACCTCGAATACAAGGACACCAAGCTGACGCTGCACTTCACCCTGCCGCTGAAGGCGCCGGTGAAGTCCGGCC AGCTCCAGGTCGAGGTTTACGATCCCAGCTATTTCATCGATTTCCAGATGGCGGAGAAGGATCCCGTCAAGCTGGTCAGC GCTCCCGCGGGCTGCAAGTTCGGCCTGGTGAGACCGAGCGACGGCGGCTCCGTCGCGCAGACCATGAACGAACAGACATT CCTGAGCGGCGGGGCGAACGCCAATTTCGGAATGAACTTCGCCAACAAGATCTCAGTGGAATGTCCATGA
Upstream 100 bases:
>100_bases GCGGCTTACGTCGCGTTCCGCGGCCGCGAGCCCGAGCCCGACGCGCTGCTCCGCCGGCGCGGCCTGCTCGACATTCCCGC AGCGGCTTGAGGTGAGGGCG
Downstream 100 bases:
>100_bases CACCTCGCCCCAGCTCCGTCCGACCGTTTCTGATTTGCGCCGCGATCCTCGCGGCGCTTTTGTCTGCCGACGCCGCCTCG CATGTGCTGCTTGCCAAATC
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MIRAVMAALLLMLGAGAASAHPHVWVTATSELLYAADGTLTGVRHAWTFDDMFATYALQGLETKQKGVYTREELAPLAQT NAESLKEYAYFTFIKADGRKQKLLDPVDYYLEYKDTKLTLHFTLPLKAPVKSGQLQVEVYDPSYFIDFQMAEKDPVKLVS APAGCKFGLVRPSDGGSVAQTMNEQTFLSGGANANFGMNFANKISVECP
Sequences:
>Translated_209_residues MIRAVMAALLLMLGAGAASAHPHVWVTATSELLYAADGTLTGVRHAWTFDDMFATYALQGLETKQKGVYTREELAPLAQT NAESLKEYAYFTFIKADGRKQKLLDPVDYYLEYKDTKLTLHFTLPLKAPVKSGQLQVEVYDPSYFIDFQMAEKDPVKLVS APAGCKFGLVRPSDGGSVAQTMNEQTFLSGGANANFGMNFANKISVECP >Mature_209_residues MIRAVMAALLLMLGAGAASAHPHVWVTATSELLYAADGTLTGVRHAWTFDDMFATYALQGLETKQKGVYTREELAPLAQT NAESLKEYAYFTFIKADGRKQKLLDPVDYYLEYKDTKLTLHFTLPLKAPVKSGQLQVEVYDPSYFIDFQMAEKDPVKLVS APAGCKFGLVRPSDGGSVAQTMNEQTFLSGGANANFGMNFANKISVECP
Specific function: Unknown
COG id: COG3683
COG function: function code R; ABC-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22919; Mature: 22919
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRAVMAALLLMLGAGAASAHPHVWVTATSELLYAADGTLTGVRHAWTFDDMFATYALQG CHHHHHHHHHHHHCCCCCCCCCEEEEEEECEEEEECCCCCCCCEEEEEHHHHHHHHHHHC LETKQKGVYTREELAPLAQTNAESLKEYAYFTFIKADGRKQKLLDPVDYYLEYKDTKLTL CCHHHCCCCCHHHHHHHHHCCHHHHHHEEEEEEEECCCCHHHCCCCHHHEEEECCCEEEE HFTLPLKAPVKSGQLQVEVYDPSYFIDFQMAEKDPVKLVSAPAGCKFGLVRPSDGGSVAQ EEEEEECCCCCCCEEEEEEECCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCHHHH TMNEQTFLSGGANANFGMNFANKISVECP HCCCCEEECCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure MIRAVMAALLLMLGAGAASAHPHVWVTATSELLYAADGTLTGVRHAWTFDDMFATYALQG CHHHHHHHHHHHHCCCCCCCCCEEEEEEECEEEEECCCCCCCCEEEEEHHHHHHHHHHHC LETKQKGVYTREELAPLAQTNAESLKEYAYFTFIKADGRKQKLLDPVDYYLEYKDTKLTL CCHHHCCCCCHHHHHHHHHCCHHHHHHEEEEEEEECCCCHHHCCCCHHHEEEECCCEEEE HFTLPLKAPVKSGQLQVEVYDPSYFIDFQMAEKDPVKLVSAPAGCKFGLVRPSDGGSVAQ EEEEEECCCCCCCEEEEEEECCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCHHHH TMNEQTFLSGGANANFGMNFANKISVECP HCCCCEEECCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA