| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is hemH [H]
Identifier: 146343058
GI number: 146343058
Start: 6494745
End: 6495842
Strand: Reverse
Name: hemH [H]
Synonym: BRADO6249
Alternate gene names: 146343058
Gene position: 6495842-6494745 (Counterclockwise)
Preceding gene: 146343061
Following gene: 146343057
Centisome position: 87.12
GC content: 61.48
Gene sequence:
>1098_bases ATGACCGCCGCCATCTCTCTCGACAATGCCAGGTCTGTCGAAGCCAAGCCGGTTGAAGCAAAGCCGGTTGAAGCAAAGCC TGTCGATTTGAAGCCGTCCTCCGCCGCGAAGACGGAGCGGGTCGGCGTGCTGCTGGTCAATCTCGGTACGCCCGACACGG CCGATGCCGCCGGCGTGCGCGTCTATCTCAAGGAATTCCTGTCCGATCGCCGCGTGATCGAGGACCAGGGCCTGCTGTGG AAGATCATTCTCAACGGCATCATCCTGAACGTCCGGCCGCGCAAGAAGGCGAAAGATTACCAGTCGATCTGGAACAATGA GAAGAACGAATCGCCGCTGAAGACGATCACGCGCGCGCAGAGCGAGAAGCTCGCGGCCGCCATGGCCGACCGCAGCCATG TCATCGTCGACTGGGCGATGCGCTACGGCAATCCGTCGATGAAGGCGGGCATCGACGGGCTGAAGGCCAAAGGGTGCGAT CGCATCCTGGTGGTGCCGCTCTATCCGCAATATTCGGCGGCGACCTCGGCAACGGTGTGCGACGAGGCCTTTCGCGTGCT GACGGAGATGCGCGCGCAGCCGACCATCCGGGTGACGCCGCCCTATTACAACGATGATTTCTACATCGAGGCGCTCGCCG TCTCGATCGAGGAGCACCTCAAGACGCTGTCGTACACGCCCGAGCTGATCGTGGCCTCGTTCCACGGCATGCCCAAGGAA TATGTCGACAAGGGCGATCCCTATCGCGAGCAATGCATCGCCACGACCGAGCTGCTGCGCAAGCGGCTCGGCATGGACGA AACCAAGCTGTTGCTGACCTTTCAATCGCGCTTCGGCTTCTCGGAATGGCTGCAGCCCTACACCGACAAGACCATCGAGA AGCTCGCCAAGGACGGCGTCAAGCGCATGGCCGTTGTGATGCCGGGCTTTTCCGCCGATTGCCTGGAAACGCTGGAAGAG ATCTCCGGCGAGAACTGCGAGATCTTCAAGCACAATGGCGGCGAGGAATTTTCCGCTGTGCCATGCCTGAACGACAGTGA ACCGGGCATGGAGGTCCTGCGGCAATTGGTGCTGCGCGAGCTGCAGGGCTGGCTCTGA
Upstream 100 bases:
>100_bases GTCATGGCTCCTCCAGCCGGATGACATCGGTGAAATGGCCCTTATCTTGACAACGTTGAAACAAGCCGCCAAGCCACGCC CTTCACCAGTCACGGGCATC
Downstream 100 bases:
>100_bases GCATCCTCGGCCGTTGCCGACCGCTAGGTCGGCTTCACGCGGGAACAAGGTTAACGGCCGCGCGGCCGCCGAAATATCTT TCCTGAACCGCGCCCATCGG
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MTAAISLDNARSVEAKPVEAKPVEAKPVDLKPSSAAKTERVGVLLVNLGTPDTADAAGVRVYLKEFLSDRRVIEDQGLLW KIILNGIILNVRPRKKAKDYQSIWNNEKNESPLKTITRAQSEKLAAAMADRSHVIVDWAMRYGNPSMKAGIDGLKAKGCD RILVVPLYPQYSAATSATVCDEAFRVLTEMRAQPTIRVTPPYYNDDFYIEALAVSIEEHLKTLSYTPELIVASFHGMPKE YVDKGDPYREQCIATTELLRKRLGMDETKLLLTFQSRFGFSEWLQPYTDKTIEKLAKDGVKRMAVVMPGFSADCLETLEE ISGENCEIFKHNGGEEFSAVPCLNDSEPGMEVLRQLVLRELQGWL
Sequences:
>Translated_365_residues MTAAISLDNARSVEAKPVEAKPVEAKPVDLKPSSAAKTERVGVLLVNLGTPDTADAAGVRVYLKEFLSDRRVIEDQGLLW KIILNGIILNVRPRKKAKDYQSIWNNEKNESPLKTITRAQSEKLAAAMADRSHVIVDWAMRYGNPSMKAGIDGLKAKGCD RILVVPLYPQYSAATSATVCDEAFRVLTEMRAQPTIRVTPPYYNDDFYIEALAVSIEEHLKTLSYTPELIVASFHGMPKE YVDKGDPYREQCIATTELLRKRLGMDETKLLLTFQSRFGFSEWLQPYTDKTIEKLAKDGVKRMAVVMPGFSADCLETLEE ISGENCEIFKHNGGEEFSAVPCLNDSEPGMEVLRQLVLRELQGWL >Mature_364_residues TAAISLDNARSVEAKPVEAKPVEAKPVDLKPSSAAKTERVGVLLVNLGTPDTADAAGVRVYLKEFLSDRRVIEDQGLLWK IILNGIILNVRPRKKAKDYQSIWNNEKNESPLKTITRAQSEKLAAAMADRSHVIVDWAMRYGNPSMKAGIDGLKAKGCDR ILVVPLYPQYSAATSATVCDEAFRVLTEMRAQPTIRVTPPYYNDDFYIEALAVSIEEHLKTLSYTPELIVASFHGMPKEY VDKGDPYREQCIATTELLRKRLGMDETKLLLTFQSRFGFSEWLQPYTDKTIEKLAKDGVKRMAVVMPGFSADCLETLEEI SGENCEIFKHNGGEEFSAVPCLNDSEPGMEVLRQLVLRELQGWL
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=359, Percent_Identity=25.3481894150418, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI60499025, Length=345, Percent_Identity=24.9275362318841, Blast_Score=95, Evalue=1e-19, Organism=Escherichia coli, GI1786681, Length=321, Percent_Identity=42.0560747663551, Blast_Score=251, Evalue=7e-68, Organism=Drosophila melanogaster, GI17864156, Length=341, Percent_Identity=24.9266862170088, Blast_Score=89, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 40834; Mature: 40703
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAISLDNARSVEAKPVEAKPVEAKPVDLKPSSAAKTERVGVLLVNLGTPDTADAAGVR CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHH VYLKEFLSDRRVIEDQGLLWKIILNGIILNVRPRKKAKDYQSIWNNEKNESPLKTITRAQ HHHHHHHHCCCEECCCCCHHEEECCCEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHH SEKLAAAMADRSHVIVDWAMRYGNPSMKAGIDGLKAKGCDRILVVPLYPQYSAATSATVC HHHHHHHHHCCCEEEEEHHHHCCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHH DEAFRVLTEMRAQPTIRVTPPYYNDDFYIEALAVSIEEHLKTLSYTPELIVASFHGMPKE HHHHHHHHHHHCCCEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHH YVDKGDPYREQCIATTELLRKRLGMDETKLLLTFQSRFGFSEWLQPYTDKTIEKLAKDGV HHCCCCCHHHHHHHHHHHHHHHHCCCCHHEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHH KRMAVVMPGFSADCLETLEEISGENCEIFKHNGGEEFSAVPCLNDSEPGMEVLRQLVLRE HHEEHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LQGWL HHCCC >Mature Secondary Structure TAAISLDNARSVEAKPVEAKPVEAKPVDLKPSSAAKTERVGVLLVNLGTPDTADAAGVR CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHH VYLKEFLSDRRVIEDQGLLWKIILNGIILNVRPRKKAKDYQSIWNNEKNESPLKTITRAQ HHHHHHHHCCCEECCCCCHHEEECCCEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHH SEKLAAAMADRSHVIVDWAMRYGNPSMKAGIDGLKAKGCDRILVVPLYPQYSAATSATVC HHHHHHHHHCCCEEEEEHHHHCCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHH DEAFRVLTEMRAQPTIRVTPPYYNDDFYIEALAVSIEEHLKTLSYTPELIVASFHGMPKE HHHHHHHHHHHCCCEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHH YVDKGDPYREQCIATTELLRKRLGMDETKLLLTFQSRFGFSEWLQPYTDKTIEKLAKDGV HHCCCCCHHHHHHHHHHHHHHHHCCCCHHEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHH KRMAVVMPGFSADCLETLEEISGENCEIFKHNGGEEFSAVPCLNDSEPGMEVLRQLVLRE HHEEHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LQGWL HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA