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The map label for this gene is qmcA [H]

Identifier: 146343057

GI number: 146343057

Start: 6493552

End: 6494556

Strand: Reverse

Name: qmcA [H]

Synonym: BRADO6248

Alternate gene names: 146343057

Gene position: 6494556-6493552 (Counterclockwise)

Preceding gene: 146343058

Following gene: 146343056

Centisome position: 87.1

GC content: 66.37

Gene sequence:

>1005_bases
ATGAGCGGTTTCGACATTTTCGCCATAGCGCTGGTGCTGCTGGTCGTCTTCACCCTGTACTCCGGCGTGAAGACGGTGCC
CCAGGGGTTCGACTGGACCGTCGAGCGGTTCGGCAAATACACCCGCACCCTGTCGCCGGGCCTCAACATCATCGTCCCGT
TCTTCGACCGCATCGGACGCAAGATCAACATGATGGAGCAGGTGATCGACATCCCCGAGCAGGAGGTCATCACCAAGGAC
AACGCCACCGTGACGGTGGACGGCGTGGCCTTCTACCAGGTGTTCGATGCGGCAAAGGCGAGCTACGAGGTCGCCAACCT
GAACCAGGCGATCATCACCTTGACCATGACCAACATCCGTTCGGTGATGGGCTCGATGGATCTCGACCAGGTGCTGTCGC
ATCGCGACGAGATCAACGAGCGGCTGCTGCGCGTCGTCGACGCCGCGGTGTCGCCCTGGGGCCTCAAGGTCAACCGCATC
GAGATCAAGGACATCGTGCCGCCGGCCGATCTGGTCGAGGCGATGGGCCGGCAGATGAAGGCCGAGCGCGTCAAGCGCGC
CGACATTCTCCAGGCCGAGGGCCAGCGGCAGTCGGAGATTTTGCGCGCGGAAGGCGCCAAGCAGAGCCAGATCCTGCAGG
CCGAGGGCCGCCGCCAATCGGCGTTCCTCGACGCCGAGGCGCGCGAGCGCGCCGCGGAAGCCGAGGCCAAGGCGACGCAG
ATGGTGTCGGATGCGATCGGCAAGGGCGACGTCGCGGCGCTGAACTACTTCATCGCCGACAAATACATCAAGGCGTTCGG
TCAGCTCGCCGACTCGCCGAATCAGAAGGTGATCATGCTGCCGATCGAGGCGACCGGCATGCTCGGCGCACTGGCCGGCA
TCGGCGAGATCGCCAAGGCGACGTTCGGCGAGAGCGCGGCCTCGGCGGTGGCCGCCGCGCGCCGCGGCGGCTCGGTGCCG
CCGGCGGGCACGCCGCCGAAGCCGCCATCACCGCCGCAGTCGTGA

Upstream 100 bases:

>100_bases
CGCGCCCATCGGACCCCCGACAAAATCATGCAGCAATCCCTAGATTGTGATTGCTGCAGAGGTCGGTGAGGAGGCGGCTG
TCTCCTCCCTTGGAGGATCC

Downstream 100 bases:

>100_bases
GGCAGGAGGTCATCTCATGAGCGACATGTTCGTGACGCTCGGTACCTGGAACTGGCTGATCTTCGGTGTCATCCTGATGG
CGATGGAGCTGCTCGCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MSGFDIFAIALVLLVVFTLYSGVKTVPQGFDWTVERFGKYTRTLSPGLNIIVPFFDRIGRKINMMEQVIDIPEQEVITKD
NATVTVDGVAFYQVFDAAKASYEVANLNQAIITLTMTNIRSVMGSMDLDQVLSHRDEINERLLRVVDAAVSPWGLKVNRI
EIKDIVPPADLVEAMGRQMKAERVKRADILQAEGQRQSEILRAEGAKQSQILQAEGRRQSAFLDAEARERAAEAEAKATQ
MVSDAIGKGDVAALNYFIADKYIKAFGQLADSPNQKVIMLPIEATGMLGALAGIGEIAKATFGESAASAVAAARRGGSVP
PAGTPPKPPSPPQS

Sequences:

>Translated_334_residues
MSGFDIFAIALVLLVVFTLYSGVKTVPQGFDWTVERFGKYTRTLSPGLNIIVPFFDRIGRKINMMEQVIDIPEQEVITKD
NATVTVDGVAFYQVFDAAKASYEVANLNQAIITLTMTNIRSVMGSMDLDQVLSHRDEINERLLRVVDAAVSPWGLKVNRI
EIKDIVPPADLVEAMGRQMKAERVKRADILQAEGQRQSEILRAEGAKQSQILQAEGRRQSAFLDAEARERAAEAEAKATQ
MVSDAIGKGDVAALNYFIADKYIKAFGQLADSPNQKVIMLPIEATGMLGALAGIGEIAKATFGESAASAVAAARRGGSVP
PAGTPPKPPSPPQS
>Mature_333_residues
SGFDIFAIALVLLVVFTLYSGVKTVPQGFDWTVERFGKYTRTLSPGLNIIVPFFDRIGRKINMMEQVIDIPEQEVITKDN
ATVTVDGVAFYQVFDAAKASYEVANLNQAIITLTMTNIRSVMGSMDLDQVLSHRDEINERLLRVVDAAVSPWGLKVNRIE
IKDIVPPADLVEAMGRQMKAERVKRADILQAEGQRQSEILRAEGAKQSQILQAEGRRQSAFLDAEARERAAEAEAKATQM
VSDAIGKGDVAALNYFIADKYIKAFGQLADSPNQKVIMLPIEATGMLGALAGIGEIAKATFGESAASAVAAARRGGSVPP
AGTPPKPPSPPQS

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=285, Percent_Identity=38.9473684210526, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI21686995, Length=200, Percent_Identity=31, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI221316744, Length=200, Percent_Identity=31, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI38016911, Length=196, Percent_Identity=35.2040816326531, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI7657615, Length=180, Percent_Identity=27.2222222222222, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI1786697, Length=294, Percent_Identity=64.6258503401361, Blast_Score=413, Evalue=1e-117,
Organism=Caenorhabditis elegans, GI32564147, Length=267, Percent_Identity=40.8239700374532, Blast_Score=182, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17569493, Length=224, Percent_Identity=28.5714285714286, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI193209764, Length=224, Percent_Identity=28.5714285714286, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI25153583, Length=208, Percent_Identity=30.7692307692308, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI71987612, Length=208, Percent_Identity=30.7692307692308, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17569499, Length=197, Percent_Identity=32.48730964467, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71987621, Length=208, Percent_Identity=30.7692307692308, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17569497, Length=199, Percent_Identity=27.1356783919598, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71989948, Length=164, Percent_Identity=32.3170731707317, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71989955, Length=164, Percent_Identity=32.3170731707317, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32566490, Length=186, Percent_Identity=31.7204301075269, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17570459, Length=207, Percent_Identity=29.4685990338164, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI193210507, Length=204, Percent_Identity=29.4117647058824, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17570161, Length=204, Percent_Identity=29.4117647058824, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI45550506, Length=262, Percent_Identity=40.4580152671756, Blast_Score=172, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24657857, Length=200, Percent_Identity=34.5, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI281365664, Length=201, Percent_Identity=34.3283582089552, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI62484448, Length=200, Percent_Identity=34.5, Blast_Score=102, Evalue=5e-22,
Organism=Drosophila melanogaster, GI45556022, Length=153, Percent_Identity=36.6013071895425, Blast_Score=101, Evalue=8e-22,
Organism=Drosophila melanogaster, GI62484274, Length=200, Percent_Identity=34.5, Blast_Score=101, Evalue=9e-22,
Organism=Drosophila melanogaster, GI281361631, Length=200, Percent_Identity=28, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI281361633, Length=200, Percent_Identity=28, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI18860517, Length=153, Percent_Identity=33.9869281045752, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI21356845, Length=187, Percent_Identity=25.668449197861, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28573263, Length=198, Percent_Identity=25.7575757575758, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI281361635, Length=132, Percent_Identity=28.7878787878788, Blast_Score=78, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 36135; Mature: 36004

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFDIFAIALVLLVVFTLYSGVKTVPQGFDWTVERFGKYTRTLSPGLNIIVPFFDRIGR
CCCHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHCH
KINMMEQVIDIPEQEVITKDNATVTVDGVAFYQVFDAAKASYEVANLNQAIITLTMTNIR
HHHHHHHHHCCCCHHHEECCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHH
SVMGSMDLDQVLSHRDEINERLLRVVDAAVSPWGLKVNRIEIKDIVPPADLVEAMGRQMK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHH
AERVKRADILQAEGQRQSEILRAEGAKQSQILQAEGRRQSAFLDAEARERAAEAEAKATQ
HHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHH
MVSDAIGKGDVAALNYFIADKYIKAFGQLADSPNQKVIMLPIEATGMLGALAGIGEIAKA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHH
TFGESAASAVAAARRGGSVPPAGTPPKPPSPPQS
HCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SGFDIFAIALVLLVVFTLYSGVKTVPQGFDWTVERFGKYTRTLSPGLNIIVPFFDRIGR
CCHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHCH
KINMMEQVIDIPEQEVITKDNATVTVDGVAFYQVFDAAKASYEVANLNQAIITLTMTNIR
HHHHHHHHHCCCCHHHEECCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHH
SVMGSMDLDQVLSHRDEINERLLRVVDAAVSPWGLKVNRIEIKDIVPPADLVEAMGRQMK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHH
AERVKRADILQAEGQRQSEILRAEGAKQSQILQAEGRRQSAFLDAEARERAAEAEAKATQ
HHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHH
MVSDAIGKGDVAALNYFIADKYIKAFGQLADSPNQKVIMLPIEATGMLGALAGIGEIAKA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHH
TFGESAASAVAAARRGGSVPPAGTPPKPPSPPQS
HCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]