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The map label for this gene is kpsF [C]

Identifier: 146343054

GI number: 146343054

Start: 6490054

End: 6491055

Strand: Reverse

Name: kpsF [C]

Synonym: BRADO6245

Alternate gene names: 146343054

Gene position: 6491055-6490054 (Counterclockwise)

Preceding gene: 146343056

Following gene: 146343052

Centisome position: 87.05

GC content: 68.86

Gene sequence:

>1002_bases
ATGCCGAGATCGAAGCCGTTGACCGACGCCACTCCCGCCAACGCGGACGTTCAATCGGCGCTGCGCACGCTCGACGCCGG
CAGCAACGGTATTGCCGCGATCGCCGCGGCGCTGCGGGGCCCGTTGGGGGCGGCCTTTGCTGCCGCCGTCGGGCTGATCC
GCCAGGCCAAGGGCCGCGCGATTCTCACCGGTCTCGGCAAGTCCGGCCACGTTGCCCGCAAAATGGCGGCCACGCTGGCC
TCGACCGGCACGCCGGCGTTCTTCGTCCATTCCGCCGAAGCCGGCCACGGCGATCTCGGCATGATCACCTCCGATGACGT
CGTCGTCGCGTTGTCCTGGTCCGGCGAGCAGCCGGAGATGAAGACGTTGGTGAACTACACCAAGCGCTTCGCGATTCCGA
TGATCGCGATCACCTCGAACGCGCAGTCGTCGCTGGGGCAGGCGGCGCGGATCGTGCTGGAGCTGCCGAAGGCGCGCGAG
GCCTGTCCGCACAATCTCGCGCCGACCACCTCGACCCTGATGCAGGCCGCGATCGGCGACGCGCTCGCGATCGCGCTACT
CGAGGGCCGCGGCTTCACCGCGCTCGAATTCGCCAATTTCCATCCGGGCGGCAAGCTCGGCGCCATGCTCAAGCACATCT
CCGATCTGATGCGCTCCGGCGACGCGGTGCCGCTGAAGCCGCTGGGTACCGGCATGGCCGATGCGCTGGCGGAGATGTCG
GCCAAGGGCCTCGGCTGCGTGGTCATCGTCGACGGCCGCGGCCATGTCGCCGGCATCATCACCGACGGCGATCTGCGCCG
TAAGATGCGCGCCGATCTCTTGTCCGTCTCCGTCGACGAGATCATGACCGCCAACCCGCGCACCGTCCGCCGCGAGGCGC
TGGCGTCGGAGGCGCTGGAGATCCTCAACTCCGCCAAGATCACCACGCTCATCGTGACCGACGGCGCCAGGCCCGTCGGC
ATCCTGCACATGCACGATCTCTTGCGCGCCGGGGTGGCGTGA

Upstream 100 bases:

>100_bases
ATATGGTTAATGGGCTGTTGATGGCGCCTTGCCGCCTTACCCATGCTAAAGAGCGGCGCCTGACTGTGTCAGCCTGAGTG
TCTCAGCCCTGGAAGCGCGA

Downstream 100 bases:

>100_bases
TCGTCTCAGACGGCCTCCGCTGCTCGCGGGAAGCGCGCCGCGCCACGCTCGAGCGGCAGTCCGAGCGCGTTCGCCAGGTA
TGAGACCGTGCGGTAGAAGC

Product: arabinose 5-phosphate isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MPRSKPLTDATPANADVQSALRTLDAGSNGIAAIAAALRGPLGAAFAAAVGLIRQAKGRAILTGLGKSGHVARKMAATLA
STGTPAFFVHSAEAGHGDLGMITSDDVVVALSWSGEQPEMKTLVNYTKRFAIPMIAITSNAQSSLGQAARIVLELPKARE
ACPHNLAPTTSTLMQAAIGDALAIALLEGRGFTALEFANFHPGGKLGAMLKHISDLMRSGDAVPLKPLGTGMADALAEMS
AKGLGCVVIVDGRGHVAGIITDGDLRRKMRADLLSVSVDEIMTANPRTVRREALASEALEILNSAKITTLIVTDGARPVG
ILHMHDLLRAGVA

Sequences:

>Translated_333_residues
MPRSKPLTDATPANADVQSALRTLDAGSNGIAAIAAALRGPLGAAFAAAVGLIRQAKGRAILTGLGKSGHVARKMAATLA
STGTPAFFVHSAEAGHGDLGMITSDDVVVALSWSGEQPEMKTLVNYTKRFAIPMIAITSNAQSSLGQAARIVLELPKARE
ACPHNLAPTTSTLMQAAIGDALAIALLEGRGFTALEFANFHPGGKLGAMLKHISDLMRSGDAVPLKPLGTGMADALAEMS
AKGLGCVVIVDGRGHVAGIITDGDLRRKMRADLLSVSVDEIMTANPRTVRREALASEALEILNSAKITTLIVTDGARPVG
ILHMHDLLRAGVA
>Mature_332_residues
PRSKPLTDATPANADVQSALRTLDAGSNGIAAIAAALRGPLGAAFAAAVGLIRQAKGRAILTGLGKSGHVARKMAATLAS
TGTPAFFVHSAEAGHGDLGMITSDDVVVALSWSGEQPEMKTLVNYTKRFAIPMIAITSNAQSSLGQAARIVLELPKAREA
CPHNLAPTTSTLMQAAIGDALAIALLEGRGFTALEFANFHPGGKLGAMLKHISDLMRSGDAVPLKPLGTGMADALAEMSA
KGLGCVVIVDGRGHVAGIITDGDLRRKMRADLLSVSVDEIMTANPRTVRREALASEALEILNSAKITTLIVTDGARPVGI
LHMHDLLRAGVA

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=300, Percent_Identity=48.3333333333333, Blast_Score=267, Evalue=8e-73,
Organism=Escherichia coli, GI87082151, Length=294, Percent_Identity=43.5374149659864, Blast_Score=232, Evalue=2e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 34353; Mature: 34222

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRSKPLTDATPANADVQSALRTLDAGSNGIAAIAAALRGPLGAAFAAAVGLIRQAKGRA
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCE
ILTGLGKSGHVARKMAATLASTGTPAFFVHSAEAGHGDLGMITSDDVVVALSWSGEQPEM
EEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCEEEEEECCCCCCHH
KTLVNYTKRFAIPMIAITSNAQSSLGQAARIVLELPKAREACPHNLAPTTSTLMQAAIGD
HHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHH
ALAIALLEGRGFTALEFANFHPGGKLGAMLKHISDLMRSGDAVPLKPLGTGMADALAEMS
HHEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
AKGLGCVVIVDGRGHVAGIITDGDLRRKMRADLLSVSVDEIMTANPRTVRREALASEALE
CCCCEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ILNSAKITTLIVTDGARPVGILHMHDLLRAGVA
HHCCCCEEEEEEECCCCCEEHHHHHHHHHHCCC
>Mature Secondary Structure 
PRSKPLTDATPANADVQSALRTLDAGSNGIAAIAAALRGPLGAAFAAAVGLIRQAKGRA
CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCE
ILTGLGKSGHVARKMAATLASTGTPAFFVHSAEAGHGDLGMITSDDVVVALSWSGEQPEM
EEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCEEEEEECCCCCCHH
KTLVNYTKRFAIPMIAITSNAQSSLGQAARIVLELPKAREACPHNLAPTTSTLMQAAIGD
HHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHH
ALAIALLEGRGFTALEFANFHPGGKLGAMLKHISDLMRSGDAVPLKPLGTGMADALAEMS
HHEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
AKGLGCVVIVDGRGHVAGIITDGDLRRKMRADLLSVSVDEIMTANPRTVRREALASEALE
CCCCEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ILNSAKITTLIVTDGARPVGILHMHDLLRAGVA
HHCCCCEEEEEEECCCCCEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]