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The map label for this gene is ybbJ [H]

Identifier: 146343056

GI number: 146343056

Start: 6493089

End: 6493535

Strand: Reverse

Name: ybbJ [H]

Synonym: BRADO6247

Alternate gene names: 146343056

Gene position: 6493535-6493089 (Counterclockwise)

Preceding gene: 146343057

Following gene: 146343054

Centisome position: 87.08

GC content: 68.01

Gene sequence:

>447_bases
ATGAGCGACATGTTCGTGACGCTCGGTACCTGGAACTGGCTGATCTTCGGTGTCATCCTGATGGCGATGGAGCTGCTCGC
GCCGGGCGTGTTTCTGTTCTGGCTCGGCCTCGCCGCGCTGCTGGTCGGCCTGCTGTCATTTGCCGTCGCGCCGGGATGGC
AGCTGCAGATCCTGCTGTTCGCATTGTTCTCGATCGCCGCGGTGCCGCTGTGGCGGCGCCTGGCGCGCGCCAATGCGGCG
GCGTCAGAGGACAATCCGTTCCTCAACCGCCGCTCGGCCGCGCTCGTCGGCCGCGAGTTCACGTTGGAGAAGCCGATCGT
CAACGGCAACGGCACGGTGCGCATCGACGACACGGTTTGGCGCGTGGCGGGCCCGGATATCCCTGCCGGCAGCCGCGTGC
GGATCGTGCAGGCGGATGGCGCGCAGCTGACGGTGACGGCGGCGTAG

Upstream 100 bases:

>100_bases
TCGGCGGTGGCCGCCGCGCGCCGCGGCGGCTCGGTGCCGCCGGCGGGCACGCCGCCGAAGCCGCCATCACCGCCGCAGTC
GTGAGGCAGGAGGTCATCTC

Downstream 100 bases:

>100_bases
CGCTGCGGGTGACGTCGCTCGATTGATGCGATGGCCTCACCGCGTCATTGCGAGCGCAGCGAAGCAATCCAGGGCCGAGT
GCGCAGCCCCTGGATTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSDMFVTLGTWNWLIFGVILMAMELLAPGVFLFWLGLAALLVGLLSFAVAPGWQLQILLFALFSIAAVPLWRRLARANAA
ASEDNPFLNRRSAALVGREFTLEKPIVNGNGTVRIDDTVWRVAGPDIPAGSRVRIVQADGAQLTVTAA

Sequences:

>Translated_148_residues
MSDMFVTLGTWNWLIFGVILMAMELLAPGVFLFWLGLAALLVGLLSFAVAPGWQLQILLFALFSIAAVPLWRRLARANAA
ASEDNPFLNRRSAALVGREFTLEKPIVNGNGTVRIDDTVWRVAGPDIPAGSRVRIVQADGAQLTVTAA
>Mature_147_residues
SDMFVTLGTWNWLIFGVILMAMELLAPGVFLFWLGLAALLVGLLSFAVAPGWQLQILLFALFSIAAVPLWRRLARANAAA
SEDNPFLNRRSAALVGREFTLEKPIVNGNGTVRIDDTVWRVAGPDIPAGSRVRIVQADGAQLTVTAA

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0826 [H]

Homologues:

Organism=Escherichia coli, GI145693099, Length=126, Percent_Identity=36.5079365079365, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR002810 [H]

Pfam domain/function: PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 16020; Mature: 15889

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDMFVTLGTWNWLIFGVILMAMELLAPGVFLFWLGLAALLVGLLSFAVAPGWQLQILLF
CCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ALFSIAAVPLWRRLARANAAASEDNPFLNRRSAALVGREFTLEKPIVNGNGTVRIDDTVW
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCEECCCCEECCCCEEEECCCEE
RVAGPDIPAGSRVRIVQADGAQLTVTAA
EECCCCCCCCCEEEEEECCCCEEEEEEC
>Mature Secondary Structure 
SDMFVTLGTWNWLIFGVILMAMELLAPGVFLFWLGLAALLVGLLSFAVAPGWQLQILLF
CCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ALFSIAAVPLWRRLARANAAASEDNPFLNRRSAALVGREFTLEKPIVNGNGTVRIDDTVW
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCEECCCCEECCCCEEEECCCEE
RVAGPDIPAGSRVRIVQADGAQLTVTAA
EECCCCCCCCCEEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]