| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343053
Identifier: 146343053
GI number: 146343053
Start: 6489494
End: 6490048
Strand: Direct
Name: 146343053
Synonym: BRADO6244
Alternate gene names: NA
Gene position: 6489494-6490048 (Clockwise)
Preceding gene: 146343049
Following gene: 146343055
Centisome position: 87.03
GC content: 67.39
Gene sequence:
>555_bases ATGCCCCGCATCAGCGCCCTGCAGCCGCCTTATCCGCCAGACATCCAGATCCAGTTCGATCAGATCATGCGCGGCGCGCC GCCCTTGATGCTGTTCCGCGTCATGGCCGGCCACGCGCGCGCCTGGGACAAATTCCGCGGTGGGAGCGTTCTGGATCGCG GCCCGTTGTCGCTGCGCGACCGCGAGATCGTCATCGATCGCACCTGCGCGCTCAATGCCTGCGAATATGAATGGGGGGTC CATGTCGCAACCTTTGCGGCCGCAGCGAGGCTGACGCCGCAACAGACCGACGCCACGGTTCTGGGCACGGCGGATGCGCC ATGCTGGTCGGGGCAGGAGCAGGCGCTGATCGCAGCCGTGGACGCGCTGCATGCGCGCGCGACCCTGACCGAGGCCGAAT TTGCAGGCTTGAGAGCCTGCTATGCGGAAGACCAGGTGCTCGAGATCATCCTGCTCTGCGGCTTCTACCGCACGGTCTCA TACCTGGCGAACGCGCTCGGACTGCCGCTCGAGCGTGGCGCGGCGCGCTTCCCGCGAGCAGCGGAGGCCGTCTGA
Upstream 100 bases:
>100_bases GCGCGAGACATGATGTGATCTCCCCCGGTCTTGCCATTCGCTATGAAAAATGTAGCATATTGCTACGTTTAATGTAGCAA AGGAGCAGGAGGACGTCATC
Downstream 100 bases:
>100_bases GACGATCACGCCACCCCGGCGCGCAAGAGATCGTGCATGTGCAGGATGCCGACGGGCCTGGCGCCGTCGGTCACGATGAG CGTGGTGATCTTGGCGGAGT
Product: putative carboxymuconolactone decarboxylase family protein
Products: NA
Alternate protein names: Alkylhydroperoxidase; Carboxymuconolactone Decarboxylase Family Protein
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MPRISALQPPYPPDIQIQFDQIMRGAPPLMLFRVMAGHARAWDKFRGGSVLDRGPLSLRDREIVIDRTCALNACEYEWGV HVATFAAAARLTPQQTDATVLGTADAPCWSGQEQALIAAVDALHARATLTEAEFAGLRACYAEDQVLEIILLCGFYRTVS YLANALGLPLERGAARFPRAAEAV
Sequences:
>Translated_184_residues MPRISALQPPYPPDIQIQFDQIMRGAPPLMLFRVMAGHARAWDKFRGGSVLDRGPLSLRDREIVIDRTCALNACEYEWGV HVATFAAAARLTPQQTDATVLGTADAPCWSGQEQALIAAVDALHARATLTEAEFAGLRACYAEDQVLEIILLCGFYRTVS YLANALGLPLERGAARFPRAAEAV >Mature_183_residues PRISALQPPYPPDIQIQFDQIMRGAPPLMLFRVMAGHARAWDKFRGGSVLDRGPLSLRDREIVIDRTCALNACEYEWGVH VATFAAAARLTPQQTDATVLGTADAPCWSGQEQALIAAVDALHARATLTEAEFAGLRACYAEDQVLEIILLCGFYRTVSY LANALGLPLERGAARFPRAAEAV
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20068; Mature: 19937
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRISALQPPYPPDIQIQFDQIMRGAPPLMLFRVMAGHARAWDKFRGGSVLDRGPLSLRD CCCCCCCCCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC REIVIDRTCALNACEYEWGVHVATFAAAARLTPQQTDATVLGTADAPCWSGQEQALIAAV CEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHH DALHARATLTEAEFAGLRACYAEDQVLEIILLCGFYRTVSYLANALGLPLERGAARFPRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH AEAV HCCC >Mature Secondary Structure PRISALQPPYPPDIQIQFDQIMRGAPPLMLFRVMAGHARAWDKFRGGSVLDRGPLSLRD CCCCCCCCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC REIVIDRTCALNACEYEWGVHVATFAAAARLTPQQTDATVLGTADAPCWSGQEQALIAAV CEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHH DALHARATLTEAEFAGLRACYAEDQVLEIILLCGFYRTVSYLANALGLPLERGAARFPRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH AEAV HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA