| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343055
Identifier: 146343055
GI number: 146343055
Start: 6491242
End: 6492948
Strand: Direct
Name: 146343055
Synonym: BRADO6246
Alternate gene names: NA
Gene position: 6491242-6492948 (Clockwise)
Preceding gene: 146343053
Following gene: 146343059
Centisome position: 87.05
GC content: 70.3
Gene sequence:
>1707_bases GTGGGGTGGAGGCCTGACAGCGGCCGCGGGGGGCGCGCGATGTTGCGCGGCGCCTCTTTCGCATGCCTGCTGCTCGGCGT GCTCGGCCCCGACGCGGCCCGGTCCCAGACCCTCGACGTGCTCCGCCCCGTCCGCGACGGCTTTCTCGCCCCGCAGGATT CGCCGCTGCGGCGGACGGCGGTGAGCGGCCTCTCCGACCCCGTGCCAACGCCGGGCGTCCCGACCACCTCGCCTCCGGCG AGCTCCGCCCCGGGCGCCAGCCGCGTCCCGCTCCCCGGCGTGCCCGCCGCCAGCGGCGCCGCCGATGTCGGCTATGATTC GCTGAACCGCACCCGCAAGAAGCCGAAATACTATCCCGCGCAGCCCCGCCCGCAGCCGGCGCCGGGACCCGGCACGCGCC CCTCGGGCGAACTGACCGGGCAGTTGCGCCCAACTCTGCCGCCATCGGCCTCCGCCAACCGGCAGCCTGTCCCGGCCGCC ATGGCGGGCACCGTGCCCGGCCAGCCGCCGCGCAAGCGGCTCAAGCTCGACGACGACCCGTTCGGCGCTGTCGGCGACTA TGTCGGTCCCTTTCTGATCAAGGGTGCGGTCGAGCTGTCGGCCGGCTACGACAGCAATCCGGCCCGGCTCGCCAACGCGC GCGGCATGCCCGCCTGGATGATCGCGCCGGAATTCCTCGCCGTGTCGAACTGGGAGCGCCACGCGCTGGTCGCCGATTTG CGCGGCTCGTTCACCGGCTATGGCGGCACCCTGCCCGCCCTCATGGACGGCGGCATCAATTCGGCGCCGACCACGCTCGA CCGCCCCGACTTCACCGGCCATGTCGATGGCCGCCTCGACATCAGCCGCGACACCTCGGTCGGCGCCCAGCTCCGCCTGC GCGCCGCGACCGACAATCCCGGCAGCCCGAGCGTGCAGGCAGGCCTCGCCCGCTATCCGGTCTACACCACGCTCGGCACG ACAGTCGGCTTCGACCAGCGCTTCAACCGGCTGCAGATCTCGGCCGGCGCCACCGCCGACCGCACCAGCTATCAAGAGAG CAAGCTGACCGACGGCACGATGACGTCGAACGACGACCGCAACTACAACCAGTTCGGCGGCATCGGCCGGGTGTCCTACG AGGTTACGCCCGGTCTCAAGCCGTTCGCCGAGGTGCAGGGCAACACCCGGACCTACGACCTGCAGTTCGACCGCTCCGGC TATCAGCGCGATTCCGCCGGCGGCTACGCCAAGGCCGGCAGCTCCTTCGAATTCACCCGGCTTCTGACCGGCGAGCTCTC GCTCGGCTACGCCACGCGCAGCTATACCGATCCGCGCCTCAACCGGCTGCAGGGCTTTCTGACCTCGGCCTCGCTGGTGT GGTCGGCGACACCGCTGACGACGGCGCGCTTCCTCTCCGACACGCAGGTCGCCGAGACCACCGTCGCCGGCGCCTCGGGT GTGCTGGTGCGCACCTACACGGTGCAGGTCGATCACGACTTCCGCCGCTGGCTGACCGGCATCGGCAAGTTCACCTTCGG CACGCTGGACTATCAGGGCTACGGCCGCAACGATCGCACGTATTCGGCCGAGGGCAATCTCATCTACAAGATGACGCGCA GCCTGTGGGTCAAAGGGTCACTGCGATATGACAAGCTCGACTCGAACATCACGGGTGCGGGATCGTCGGGCACCGTCGTG ATGCTGGGCGTGCGATTGCAGAATTGA
Upstream 100 bases:
>100_bases CCCATTAACCATATTTGTTTTTACTCCCTTAACGACGGTGTTGGCCGGCGGCGCGGGACTCCCCCGACGACGCAGTTGAT TTTGTTGGAGTATTTTCATC
Downstream 100 bases:
>100_bases GCCCAGCTCTCTCCTCGTCATTGCGAGGAGCGCAGCGACGACGCAATCCAGGGGCTGCGCACTCGGCCCTGGATTGCTTC GCTGCGCTCGCAATGACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 568; Mature: 567
Protein sequence:
>568_residues MGWRPDSGRGGRAMLRGASFACLLLGVLGPDAARSQTLDVLRPVRDGFLAPQDSPLRRTAVSGLSDPVPTPGVPTTSPPA SSAPGASRVPLPGVPAASGAADVGYDSLNRTRKKPKYYPAQPRPQPAPGPGTRPSGELTGQLRPTLPPSASANRQPVPAA MAGTVPGQPPRKRLKLDDDPFGAVGDYVGPFLIKGAVELSAGYDSNPARLANARGMPAWMIAPEFLAVSNWERHALVADL RGSFTGYGGTLPALMDGGINSAPTTLDRPDFTGHVDGRLDISRDTSVGAQLRLRAATDNPGSPSVQAGLARYPVYTTLGT TVGFDQRFNRLQISAGATADRTSYQESKLTDGTMTSNDDRNYNQFGGIGRVSYEVTPGLKPFAEVQGNTRTYDLQFDRSG YQRDSAGGYAKAGSSFEFTRLLTGELSLGYATRSYTDPRLNRLQGFLTSASLVWSATPLTTARFLSDTQVAETTVAGASG VLVRTYTVQVDHDFRRWLTGIGKFTFGTLDYQGYGRNDRTYSAEGNLIYKMTRSLWVKGSLRYDKLDSNITGAGSSGTVV MLGVRLQN
Sequences:
>Translated_568_residues MGWRPDSGRGGRAMLRGASFACLLLGVLGPDAARSQTLDVLRPVRDGFLAPQDSPLRRTAVSGLSDPVPTPGVPTTSPPA SSAPGASRVPLPGVPAASGAADVGYDSLNRTRKKPKYYPAQPRPQPAPGPGTRPSGELTGQLRPTLPPSASANRQPVPAA MAGTVPGQPPRKRLKLDDDPFGAVGDYVGPFLIKGAVELSAGYDSNPARLANARGMPAWMIAPEFLAVSNWERHALVADL RGSFTGYGGTLPALMDGGINSAPTTLDRPDFTGHVDGRLDISRDTSVGAQLRLRAATDNPGSPSVQAGLARYPVYTTLGT TVGFDQRFNRLQISAGATADRTSYQESKLTDGTMTSNDDRNYNQFGGIGRVSYEVTPGLKPFAEVQGNTRTYDLQFDRSG YQRDSAGGYAKAGSSFEFTRLLTGELSLGYATRSYTDPRLNRLQGFLTSASLVWSATPLTTARFLSDTQVAETTVAGASG VLVRTYTVQVDHDFRRWLTGIGKFTFGTLDYQGYGRNDRTYSAEGNLIYKMTRSLWVKGSLRYDKLDSNITGAGSSGTVV MLGVRLQN >Mature_567_residues GWRPDSGRGGRAMLRGASFACLLLGVLGPDAARSQTLDVLRPVRDGFLAPQDSPLRRTAVSGLSDPVPTPGVPTTSPPAS SAPGASRVPLPGVPAASGAADVGYDSLNRTRKKPKYYPAQPRPQPAPGPGTRPSGELTGQLRPTLPPSASANRQPVPAAM AGTVPGQPPRKRLKLDDDPFGAVGDYVGPFLIKGAVELSAGYDSNPARLANARGMPAWMIAPEFLAVSNWERHALVADLR GSFTGYGGTLPALMDGGINSAPTTLDRPDFTGHVDGRLDISRDTSVGAQLRLRAATDNPGSPSVQAGLARYPVYTTLGTT VGFDQRFNRLQISAGATADRTSYQESKLTDGTMTSNDDRNYNQFGGIGRVSYEVTPGLKPFAEVQGNTRTYDLQFDRSGY QRDSAGGYAKAGSSFEFTRLLTGELSLGYATRSYTDPRLNRLQGFLTSASLVWSATPLTTARFLSDTQVAETTVAGASGV LVRTYTVQVDHDFRRWLTGIGKFTFGTLDYQGYGRNDRTYSAEGNLIYKMTRSLWVKGSLRYDKLDSNITGAGSSGTVVM LGVRLQN
Specific function: Unknown
COG id: COG5338
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60546; Mature: 60415
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWRPDSGRGGRAMLRGASFACLLLGVLGPDAARSQTLDVLRPVRDGFLAPQDSPLRRTA CCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHH VSGLSDPVPTPGVPTTSPPASSAPGASRVPLPGVPAASGAADVGYDSLNRTRKKPKYYPA HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC QPRPQPAPGPGTRPSGELTGQLRPTLPPSASANRQPVPAAMAGTVPGQPPRKRLKLDDDP CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCHHCCCCCCCC FGAVGDYVGPFLIKGAVELSAGYDSNPARLANARGMPAWMIAPEFLAVSNWERHALVADL CCCHHHHHHHHHHHCEEEEECCCCCCCHHHHCCCCCCEEEECCHHHHHCCCCHHEEEEHH RGSFTGYGGTLPALMDGGINSAPTTLDRPDFTGHVDGRLDISRDTSVGAQLRLRAATDNP CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCC GSPSVQAGLARYPVYTTLGTTVGFDQRFNRLQISAGATADRTSYQESKLTDGTMTSNDDR CCCCHHHHHHHCCEEEECCCCCCHHHCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCC NYNQFGGIGRVSYEVTPGLKPFAEVQGNTRTYDLQFDRSGYQRDSAGGYAKAGSSFEFTR CHHHHCCCEEEEEEECCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEE LLTGELSLGYATRSYTDPRLNRLQGFLTSASLVWSATPLTTARFLSDTQVAETTVAGASG EEECCEEECEEECCCCCHHHHHHHHHHHHCEEEEECCCCHHHHHHCCCHHHHHHHCCCCC VLVRTYTVQVDHDFRRWLTGIGKFTFGTLDYQGYGRNDRTYSAEGNLIYKMTRSLWVKGS EEEEEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCCCCEEECCCCEEEEEEHHHEEECC LRYDKLDSNITGAGSSGTVVMLGVRLQN CCCCCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure GWRPDSGRGGRAMLRGASFACLLLGVLGPDAARSQTLDVLRPVRDGFLAPQDSPLRRTA CCCCCCCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHH VSGLSDPVPTPGVPTTSPPASSAPGASRVPLPGVPAASGAADVGYDSLNRTRKKPKYYPA HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC QPRPQPAPGPGTRPSGELTGQLRPTLPPSASANRQPVPAAMAGTVPGQPPRKRLKLDDDP CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCHHCCCCCCCC FGAVGDYVGPFLIKGAVELSAGYDSNPARLANARGMPAWMIAPEFLAVSNWERHALVADL CCCHHHHHHHHHHHCEEEEECCCCCCCHHHHCCCCCCEEEECCHHHHHCCCCHHEEEEHH RGSFTGYGGTLPALMDGGINSAPTTLDRPDFTGHVDGRLDISRDTSVGAQLRLRAATDNP CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCC GSPSVQAGLARYPVYTTLGTTVGFDQRFNRLQISAGATADRTSYQESKLTDGTMTSNDDR CCCCHHHHHHHCCEEEECCCCCCHHHCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCC NYNQFGGIGRVSYEVTPGLKPFAEVQGNTRTYDLQFDRSGYQRDSAGGYAKAGSSFEFTR CHHHHCCCEEEEEEECCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEE LLTGELSLGYATRSYTDPRLNRLQGFLTSASLVWSATPLTTARFLSDTQVAETTVAGASG EEECCEEECEEECCCCCHHHHHHHHHHHHCEEEEECCCCHHHHHHCCCHHHHHHHCCCCC VLVRTYTVQVDHDFRRWLTGIGKFTFGTLDYQGYGRNDRTYSAEGNLIYKMTRSLWVKGS EEEEEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCCCCEEECCCCEEEEEEHHHEEECC LRYDKLDSNITGAGSSGTVVMLGVRLQN CCCCCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA