| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is cya3 [H]
Identifier: 146343032
GI number: 146343032
Start: 6456429
End: 6458174
Strand: Direct
Name: cya3 [H]
Synonym: BRADO6220
Alternate gene names: 146343032
Gene position: 6456429-6458174 (Clockwise)
Preceding gene: 146343030
Following gene: 146343033
Centisome position: 86.59
GC content: 63.52
Gene sequence:
>1746_bases ATGGAAAGACGCCTCGCCGCCATCCTTTGCGCCGACGTTGCCGGCTATTCGCGCATGATGGGAATCGACGAGGCCGGGAC GCACGCCGCCTTCAAGGCGCACCGTAGCGCCATTCATCCGATCATCCTCAATCATGCTGGCCGGATCGTCAAACACACCG GCGATGGCTTCCTGCTGGAGTTCGCGAACGCCGCCAGCGCGATCCAGTTCGGTGTCGAGATGCAATGCCTCATGGCAGAG CGCAATGCGCATCTGCCTGCCGACCGAAACATGCGTTTCCGCCTCGGCATTCACAGGGGCGAGGTCACGATCGACGATGG CGAGGCGTTCGGAGACGGCATCAATGTCGCCGTCAATCTCGAATCGATTGCAACGCCTGGTGGAGTTGCCGTCTCGGGAC GGGCTTACGAGGAAGCCAGCCTGCAGCTTCCTGTCAATCTGACCCTCGCCGGGAGCTTCCAATTCGGGAACTTCCAAGAG CCGGTTCAGGCGTGGACCTGGGAACCTGACAGCGACGGCGCGTTCGGGTCGCAGAAGAACGCAACGAGCCTGCCCGCCCA ATACCGCACGGCGATCGTCGGCGTGCTGCCGTTCGCGAACCTGTCCGACGGCCCGGACGAATATCTCGCCGACGGACTCG CCGATGATCTGATCCACGCGCTGTCGCTGCAATCGTTCTTTCGGGTGCTGAGCCGGACGTCGACCTTCCGCTTCAGGGAC CGCGATCTGAACCTTCGCCTGATCGCGCGCGAGATCGACGCGACCTATCTGATTCAAGGGACGGTCCGGCGCTCGCACGA CAAGATTCGGGTGACAGCGGAGTTGATCGTCCCGGAAAGCGGCGCCCAATTGTGGACTGGCCGCTATGATCGGGACCTCG GCGATCTCTTCGCCATGCAGGATGAAATTACCACGAGCCTCTGCGCGGCGCTCATGCCTGAGATCTACCGCGTCGAAGCT TCGGTGCCGTTCCGCTCGCCTGCGACCAACCCGACCGCCTGGGACCGTTTTCTGCGGGGGCTGTCGCACTATTACCGGCC AACCAAGGCCGACTACGAGGTCGCGATTGCGCTGTTCCGCGAGGCCATCTCGCTCGATCCATCGCTTGGCATTGCGCATG CCTACCTTGCGACCATTCTGATGCAGGGGATCAGCTTCGGCTGGATCAAAGGCTCGCGCGAGCTCTGGGACGAGGCAAAA AGCCTGGCGCTCGACAGCGTCCGCCTCGACCCGCGCTCCTCGTTCGCTTACGCGATTCTCGCCTTCGTCCAAGCCATGCA AGGGGCGCATGATGACGGCATGAAGGCCGCGCGGAAGGCGACCGAGCTCAACGCCTATGACATGGGCGCGCGGGGCGTGC TGGGCCTCTGCCACATGGTCAGCGGCGAACACCAGCTGGCCATCGACCAGTTCTCGATCGCGGCCCAACGCGGCAACAGC GATCCGCGCTACCAATGGCCGGCACTGAACGCCTACAGCCATTACCTGATCGGCCGGTACGAGGCGGCACTGTCCTGGGC CCGGGAGGAGCTGCTGCTCTATCCCAACCACCTGCAGGCCCTGATGGTCCGGGCGGCAACGCTGGCGCAGCTCGGCGACA CCGATCAAGCGCGCGCCGCCATCCGAGGCATGCGCGAGCAATATCCCTGGCTGACGCTTGACCGTCACGTGAAGAACATC CGGTGGAAAAACAGGGCCGACCTCGATCACTACCGCGACGGGCTGATCAAGGCCGGGCTGATTTAA
Upstream 100 bases:
>100_bases CGTATCCAGAATGCCTCGTCGAAGGTCACGTGTGCGGCTCCGGAAAGCATTGGATTCAGCCGCCCGGGCCATGTTAAGCG CGAGGCGGGAGCACGACGTG
Downstream 100 bases:
>100_bases ACCAATTACAAGGTAGATCCCTTGACCCGCCACATGGCCCGCACATTGCTTCCGCAAATTGATTGGATTCAAACGATGCT GCCGTGGTATCGCCCTCTAT
Product: putative adenylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 581; Mature: 581
Protein sequence:
>581_residues MERRLAAILCADVAGYSRMMGIDEAGTHAAFKAHRSAIHPIILNHAGRIVKHTGDGFLLEFANAASAIQFGVEMQCLMAE RNAHLPADRNMRFRLGIHRGEVTIDDGEAFGDGINVAVNLESIATPGGVAVSGRAYEEASLQLPVNLTLAGSFQFGNFQE PVQAWTWEPDSDGAFGSQKNATSLPAQYRTAIVGVLPFANLSDGPDEYLADGLADDLIHALSLQSFFRVLSRTSTFRFRD RDLNLRLIAREIDATYLIQGTVRRSHDKIRVTAELIVPESGAQLWTGRYDRDLGDLFAMQDEITTSLCAALMPEIYRVEA SVPFRSPATNPTAWDRFLRGLSHYYRPTKADYEVAIALFREAISLDPSLGIAHAYLATILMQGISFGWIKGSRELWDEAK SLALDSVRLDPRSSFAYAILAFVQAMQGAHDDGMKAARKATELNAYDMGARGVLGLCHMVSGEHQLAIDQFSIAAQRGNS DPRYQWPALNAYSHYLIGRYEAALSWAREELLLYPNHLQALMVRAATLAQLGDTDQARAAIRGMREQYPWLTLDRHVKNI RWKNRADLDHYRDGLIKAGLI
Sequences:
>Translated_581_residues MERRLAAILCADVAGYSRMMGIDEAGTHAAFKAHRSAIHPIILNHAGRIVKHTGDGFLLEFANAASAIQFGVEMQCLMAE RNAHLPADRNMRFRLGIHRGEVTIDDGEAFGDGINVAVNLESIATPGGVAVSGRAYEEASLQLPVNLTLAGSFQFGNFQE PVQAWTWEPDSDGAFGSQKNATSLPAQYRTAIVGVLPFANLSDGPDEYLADGLADDLIHALSLQSFFRVLSRTSTFRFRD RDLNLRLIAREIDATYLIQGTVRRSHDKIRVTAELIVPESGAQLWTGRYDRDLGDLFAMQDEITTSLCAALMPEIYRVEA SVPFRSPATNPTAWDRFLRGLSHYYRPTKADYEVAIALFREAISLDPSLGIAHAYLATILMQGISFGWIKGSRELWDEAK SLALDSVRLDPRSSFAYAILAFVQAMQGAHDDGMKAARKATELNAYDMGARGVLGLCHMVSGEHQLAIDQFSIAAQRGNS DPRYQWPALNAYSHYLIGRYEAALSWAREELLLYPNHLQALMVRAATLAQLGDTDQARAAIRGMREQYPWLTLDRHVKNI RWKNRADLDHYRDGLIKAGLI >Mature_581_residues MERRLAAILCADVAGYSRMMGIDEAGTHAAFKAHRSAIHPIILNHAGRIVKHTGDGFLLEFANAASAIQFGVEMQCLMAE RNAHLPADRNMRFRLGIHRGEVTIDDGEAFGDGINVAVNLESIATPGGVAVSGRAYEEASLQLPVNLTLAGSFQFGNFQE PVQAWTWEPDSDGAFGSQKNATSLPAQYRTAIVGVLPFANLSDGPDEYLADGLADDLIHALSLQSFFRVLSRTSTFRFRD RDLNLRLIAREIDATYLIQGTVRRSHDKIRVTAELIVPESGAQLWTGRYDRDLGDLFAMQDEITTSLCAALMPEIYRVEA SVPFRSPATNPTAWDRFLRGLSHYYRPTKADYEVAIALFREAISLDPSLGIAHAYLATILMQGISFGWIKGSRELWDEAK SLALDSVRLDPRSSFAYAILAFVQAMQGAHDDGMKAARKATELNAYDMGARGVLGLCHMVSGEHQLAIDQFSIAAQRGNS DPRYQWPALNAYSHYLIGRYEAALSWAREELLLYPNHLQALMVRAATLAQLGDTDQARAAIRGMREQYPWLTLDRHVKNI RWKNRADLDHYRDGLIKAGLI
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 64441; Mature: 64441
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50293 TPR_REGION ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERRLAAILCADVAGYSRMMGIDEAGTHAAFKAHRSAIHPIILNHAGRIVKHTGDGFLLE CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHCCCCEEEECCCCEEEE FANAASAIQFGVEMQCLMAERNAHLPADRNMRFRLGIHRGEVTIDDGEAFGDGINVAVNL HHHHHHHHHHCCHHEEEEHHCCCCCCCCCCCEEEEEEEECEEEEECCCCCCCCCEEEEEE ESIATPGGVAVSGRAYEEASLQLPVNLTLAGSFQFGNFQEPVQAWTWEPDSDGAFGSQKN HHHCCCCCEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCC ATSLPAQYRTAIVGVLPFANLSDGPDEYLADGLADDLIHALSLQSFFRVLSRTSTFRFRD CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC RDLNLRLIAREIDATYLIQGTVRRSHDKIRVTAELIVPESGAQLWTGRYDRDLGDLFAMQ CCCCEEEEEEECCCEEEEEEHHHCCCCEEEEEEEEEECCCCCCEECCCCCCCHHHHHHHH DEITTSLCAALMPEIYRVEASVPFRSPATNPTAWDRFLRGLSHYYRPTKADYEVAIALFR HHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH EAISLDPSLGIAHAYLATILMQGISFGWIKGSRELWDEAKSLALDSVRLDPRSSFAYAIL HHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHEECCCCHHHHHHHH AFVQAMQGAHDDGMKAARKATELNAYDMGARGVLGLCHMVSGEHQLAIDQFSIAAQRGNS HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHCCCC DPRYQWPALNAYSHYLIGRYEAALSWAREELLLYPNHLQALMVRAATLAQLGDTDQARAA CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCHHHHHH IRGMREQYPWLTLDRHVKNIRWKNRADLDHYRDGLIKAGLI HHHHHHHCCCEEHHHHHHHCCCCCCCCHHHHHCCCHHCCCC >Mature Secondary Structure MERRLAAILCADVAGYSRMMGIDEAGTHAAFKAHRSAIHPIILNHAGRIVKHTGDGFLLE CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHCCCCEEEECCCCEEEE FANAASAIQFGVEMQCLMAERNAHLPADRNMRFRLGIHRGEVTIDDGEAFGDGINVAVNL HHHHHHHHHHCCHHEEEEHHCCCCCCCCCCCEEEEEEEECEEEEECCCCCCCCCEEEEEE ESIATPGGVAVSGRAYEEASLQLPVNLTLAGSFQFGNFQEPVQAWTWEPDSDGAFGSQKN HHHCCCCCEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCC ATSLPAQYRTAIVGVLPFANLSDGPDEYLADGLADDLIHALSLQSFFRVLSRTSTFRFRD CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC RDLNLRLIAREIDATYLIQGTVRRSHDKIRVTAELIVPESGAQLWTGRYDRDLGDLFAMQ CCCCEEEEEEECCCEEEEEEHHHCCCCEEEEEEEEEECCCCCCEECCCCCCCHHHHHHHH DEITTSLCAALMPEIYRVEASVPFRSPATNPTAWDRFLRGLSHYYRPTKADYEVAIALFR HHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH EAISLDPSLGIAHAYLATILMQGISFGWIKGSRELWDEAKSLALDSVRLDPRSSFAYAIL HHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHEECCCCHHHHHHHH AFVQAMQGAHDDGMKAARKATELNAYDMGARGVLGLCHMVSGEHQLAIDQFSIAAQRGNS HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHCCCC DPRYQWPALNAYSHYLIGRYEAALSWAREELLLYPNHLQALMVRAATLAQLGDTDQARAA CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCHHHHHH IRGMREQYPWLTLDRHVKNIRWKNRADLDHYRDGLIKAGLI HHHHHHHCCCEEHHHHHHHCCCCCCCCHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]