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The map label for this gene is mcp4 [H]

Identifier: 146343028

GI number: 146343028

Start: 6451872

End: 6453890

Strand: Direct

Name: mcp4 [H]

Synonym: BRADO6216

Alternate gene names: 146343028

Gene position: 6451872-6453890 (Clockwise)

Preceding gene: 146343027

Following gene: 146343030

Centisome position: 86.53

GC content: 65.92

Gene sequence:

>2019_bases
ATGCGACTAAAATACACATCGAATGCTGCTGAACTGGGAATGCTCGCCATGAAGGGTCTCTCGCTCCGCCTCACGCACAA
GATCATGGCCATCGGTCTGATCGGCCTGTTCGCACTGATCACCTTCGGCGCGATCTATTGGACGGGAAGCAGAACCCAGG
ACGTGTCACGCGCCCTCGCCGCCCAGGCCCGTGACATCGACGACATCAACAATAAGCTCGCAACCGACCTTCTCGAGGCG
CGGCGCGCCGAGAAGGATTTCCTGCTCCGCCGCGACCCGAAATACGCCGCCCGCCACACCGAGCTGAGCGCCGCGATCCA
GCGCGACCTCGAACAGCTCGGCAGCAAGAGCCGCACAGCCGGCGAGCGTGCGATGGTCGACAAGGTCGACGCCGTCAGCA
AGGGGTTCGCCGCCTATCGCCAGGAGTTTGCGGAGGTCGAGCGCGCGCAGGTCCGGCTCGGATTGAACGAGACGCTCGGG
CTGTCCGGCTCGTTGCGCAACGCCGTGCACGACATCGAGGCCAAGCTCAAGGAGATCGACGAACCCAGGCTGATGAGCGG
CATGCTGATGCTGCGGCGGCACGAGAAGGATTTCATGCTGCGTGGCGACGCGAAATATGTCGCCCAGCTGAAGAGCGCCG
TCACCGATTTCTCCAAGGCGCTCGCGTCAGGCGATCTCTCGTCCGAGATGAAGGCGGACATCGGACAGAAGCTCGACAAG
TACCAGAAGGACTTCCTCGCCTGGTCCGACGGATTCCAGGAGGCAGCCCGCCATAGCGCCGCGATGTCCAGGACATTCGC
CGAGATCGAACCGTTGATCGCCGAGATTGGCAAGGCGGTCGCCCAGCAATATGCTGTCGCGCAAACGGCCAACGCTCAGG
CCGAAGAGGCCGTCAAGCGCGGCATGCTGTGGACGCTCGGCCTCTCGCTCATCCTCGTCAGCTGCGTGTCGTTTGTGATC
GGCCGCGGCATCTCCAACGCGATCCGGCACATGGTACAGGCCATGACGCGCCTGGCGGCGGGCGATGCGTCGATCCGGAT
TCCCGGCGTCGGCCGGCGTGACGAGATCGGCGAGATGGCCGGCGCGGTCGAAGTGTTCAAGACCAACATGATCGAGACCG
AGCGGTTGCGCGCCGAGCAGGCTGACATCGACAAGCGCCAGACGCAGCAGCGCAAGGCGGAGATGGCGGCACTGGCGAAC
AGTTTCGAAATGGCGGTGGGCCGGATCATCGAGACCGTGTCGTCGGCCTCCACCGAACTCGAAGCGTCGGCGACGACGCT
GACGCGCAATGCCCAGCATGGCCAGTCGCTCGCGACGGCTGTGGCGTCGGCCTCCGAGGAAGCCGCCGCCGGCGTCCAAT
CGGTGGCCTCAGCGACCGAGGAACTCTCGGTCTCCGTCGGCGAGATCAGCCGCCAGGTGCAGGAATCCGCGCGAATCGCC
GGCGAGGCGGTCGGCCAGGCGCGGCGCACCAATGAGCGCGTCAGCGAGCTGTCGAAGGCGGCCACGCGGATCGGCGACGT
CGTCGAGCTGATCAACACGATCGCCGGTCAGACCAACCTGCTGGCGCTGAACGCAACCATCGAGGCGGCTCGCGCCGGCG
ACGCCGGCCGAGGCTTCGCCGTGGTCGCATCCGAGGTCAAGGCGTTGGCCGAGCAGACGGCGAAGGCGACCGGAGAAATC
GGCCAGCAGATCGCCAGCATCCAGTCAGCCACAGCCGAGTCCGTCGACGTCATCAGGGAGGTCTCCGGGACGATCGAGCG
GCTGTCTCATATCTCCGCGACCATCGCAGCGGCGATCGAGCAGCAGGGCGCCGCCACCCAGGAAATCTCCCGCAACGTGC
AGCATACGGCGCAGGGCACGCAGCGCGTCTCCGACAACATCGTGGAGGTGCAGCAAGGCACCGCCGAGACGGGATCGGCC
TCGGCCCAGGTGCTGTCGGCGGCGCAGTCGCTGGCGGAGGAGAGTAGCCGCCTGAAGCTCGAGGTCGGCCATTTCCTCGA
GAACGTCCGCGCAGCCTGA

Upstream 100 bases:

>100_bases
AAACGGCTCGGGGGCTAGGCTGGCCGTAGAACTACGTAATAAGCACTTTACCGTGCGATCTTAACCCCTCATTGAGAGCC
ACTGCCTAGCTTTTCAGCAC

Downstream 100 bases:

>100_bases
CGGCTCACGCGGCCGCGCCGCGCAGATGCTCGACCAGCAGCTTGGCCGGGCGCGGCAGCGCCTTGAAGCTGCGGGCGCAC
ATCACGAGCCTGCGGTCCGC

Product: putative methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 672; Mature: 672

Protein sequence:

>672_residues
MRLKYTSNAAELGMLAMKGLSLRLTHKIMAIGLIGLFALITFGAIYWTGSRTQDVSRALAAQARDIDDINNKLATDLLEA
RRAEKDFLLRRDPKYAARHTELSAAIQRDLEQLGSKSRTAGERAMVDKVDAVSKGFAAYRQEFAEVERAQVRLGLNETLG
LSGSLRNAVHDIEAKLKEIDEPRLMSGMLMLRRHEKDFMLRGDAKYVAQLKSAVTDFSKALASGDLSSEMKADIGQKLDK
YQKDFLAWSDGFQEAARHSAAMSRTFAEIEPLIAEIGKAVAQQYAVAQTANAQAEEAVKRGMLWTLGLSLILVSCVSFVI
GRGISNAIRHMVQAMTRLAAGDASIRIPGVGRRDEIGEMAGAVEVFKTNMIETERLRAEQADIDKRQTQQRKAEMAALAN
SFEMAVGRIIETVSSASTELEASATTLTRNAQHGQSLATAVASASEEAAAGVQSVASATEELSVSVGEISRQVQESARIA
GEAVGQARRTNERVSELSKAATRIGDVVELINTIAGQTNLLALNATIEAARAGDAGRGFAVVASEVKALAEQTAKATGEI
GQQIASIQSATAESVDVIREVSGTIERLSHISATIAAAIEQQGAATQEISRNVQHTAQGTQRVSDNIVEVQQGTAETGSA
SAQVLSAAQSLAEESSRLKLEVGHFLENVRAA

Sequences:

>Translated_672_residues
MRLKYTSNAAELGMLAMKGLSLRLTHKIMAIGLIGLFALITFGAIYWTGSRTQDVSRALAAQARDIDDINNKLATDLLEA
RRAEKDFLLRRDPKYAARHTELSAAIQRDLEQLGSKSRTAGERAMVDKVDAVSKGFAAYRQEFAEVERAQVRLGLNETLG
LSGSLRNAVHDIEAKLKEIDEPRLMSGMLMLRRHEKDFMLRGDAKYVAQLKSAVTDFSKALASGDLSSEMKADIGQKLDK
YQKDFLAWSDGFQEAARHSAAMSRTFAEIEPLIAEIGKAVAQQYAVAQTANAQAEEAVKRGMLWTLGLSLILVSCVSFVI
GRGISNAIRHMVQAMTRLAAGDASIRIPGVGRRDEIGEMAGAVEVFKTNMIETERLRAEQADIDKRQTQQRKAEMAALAN
SFEMAVGRIIETVSSASTELEASATTLTRNAQHGQSLATAVASASEEAAAGVQSVASATEELSVSVGEISRQVQESARIA
GEAVGQARRTNERVSELSKAATRIGDVVELINTIAGQTNLLALNATIEAARAGDAGRGFAVVASEVKALAEQTAKATGEI
GQQIASIQSATAESVDVIREVSGTIERLSHISATIAAAIEQQGAATQEISRNVQHTAQGTQRVSDNIVEVQQGTAETGSA
SAQVLSAAQSLAEESSRLKLEVGHFLENVRAA
>Mature_672_residues
MRLKYTSNAAELGMLAMKGLSLRLTHKIMAIGLIGLFALITFGAIYWTGSRTQDVSRALAAQARDIDDINNKLATDLLEA
RRAEKDFLLRRDPKYAARHTELSAAIQRDLEQLGSKSRTAGERAMVDKVDAVSKGFAAYRQEFAEVERAQVRLGLNETLG
LSGSLRNAVHDIEAKLKEIDEPRLMSGMLMLRRHEKDFMLRGDAKYVAQLKSAVTDFSKALASGDLSSEMKADIGQKLDK
YQKDFLAWSDGFQEAARHSAAMSRTFAEIEPLIAEIGKAVAQQYAVAQTANAQAEEAVKRGMLWTLGLSLILVSCVSFVI
GRGISNAIRHMVQAMTRLAAGDASIRIPGVGRRDEIGEMAGAVEVFKTNMIETERLRAEQADIDKRQTQQRKAEMAALAN
SFEMAVGRIIETVSSASTELEASATTLTRNAQHGQSLATAVASASEEAAAGVQSVASATEELSVSVGEISRQVQESARIA
GEAVGQARRTNERVSELSKAATRIGDVVELINTIAGQTNLLALNATIEAARAGDAGRGFAVVASEVKALAEQTAKATGEI
GQQIASIQSATAESVDVIREVSGTIERLSHISATIAAAIEQQGAATQEISRNVQHTAQGTQRVSDNIVEVQQGTAETGSA
SAQVLSAAQSLAEESSRLKLEVGHFLENVRAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=392, Percent_Identity=28.5714285714286, Blast_Score=106, Evalue=5e-24,
Organism=Escherichia coli, GI2367378, Length=335, Percent_Identity=28.3582089552239, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1788194, Length=200, Percent_Identity=33.5, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI1788195, Length=200, Percent_Identity=32, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1789453, Length=156, Percent_Identity=37.1794871794872, Blast_Score=79, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 72008; Mature: 72008

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKYTSNAAELGMLAMKGLSLRLTHKIMAIGLIGLFALITFGAIYWTGSRTQDVSRALA
CCEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
AQARDIDDINNKLATDLLEARRAEKDFLLRRDPKYAARHTELSAAIQRDLEQLGSKSRTA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
GERAMVDKVDAVSKGFAAYRQEFAEVERAQVRLGLNETLGLSGSLRNAVHDIEAKLKEID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHCC
EPRLMSGMLMLRRHEKDFMLRGDAKYVAQLKSAVTDFSKALASGDLSSEMKADIGQKLDK
CHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YQKDFLAWSDGFQEAARHSAAMSRTFAEIEPLIAEIGKAVAQQYAVAQTANAQAEEAVKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
GMLWTLGLSLILVSCVSFVIGRGISNAIRHMVQAMTRLAAGDASIRIPGVGRRDEIGEMA
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHH
GAVEVFKTNMIETERLRAEQADIDKRQTQQRKAEMAALANSFEMAVGRIIETVSSASTEL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EASATTLTRNAQHGQSLATAVASASEEAAAGVQSVASATEELSVSVGEISRQVQESARIA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEAVGQARRTNERVSELSKAATRIGDVVELINTIAGQTNLLALNATIEAARAGDAGRGFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCHH
VVASEVKALAEQTAKATGEIGQQIASIQSATAESVDVIREVSGTIERLSHISATIAAAIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQGAATQEISRNVQHTAQGTQRVSDNIVEVQQGTAETGSASAQVLSAAQSLAEESSRLKL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EVGHFLENVRAA
HHHHHHHHHCCC
>Mature Secondary Structure
MRLKYTSNAAELGMLAMKGLSLRLTHKIMAIGLIGLFALITFGAIYWTGSRTQDVSRALA
CCEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
AQARDIDDINNKLATDLLEARRAEKDFLLRRDPKYAARHTELSAAIQRDLEQLGSKSRTA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
GERAMVDKVDAVSKGFAAYRQEFAEVERAQVRLGLNETLGLSGSLRNAVHDIEAKLKEID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHCC
EPRLMSGMLMLRRHEKDFMLRGDAKYVAQLKSAVTDFSKALASGDLSSEMKADIGQKLDK
CHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YQKDFLAWSDGFQEAARHSAAMSRTFAEIEPLIAEIGKAVAQQYAVAQTANAQAEEAVKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
GMLWTLGLSLILVSCVSFVIGRGISNAIRHMVQAMTRLAAGDASIRIPGVGRRDEIGEMA
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHH
GAVEVFKTNMIETERLRAEQADIDKRQTQQRKAEMAALANSFEMAVGRIIETVSSASTEL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EASATTLTRNAQHGQSLATAVASASEEAAAGVQSVASATEELSVSVGEISRQVQESARIA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEAVGQARRTNERVSELSKAATRIGDVVELINTIAGQTNLLALNATIEAARAGDAGRGFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCHH
VVASEVKALAEQTAKATGEIGQQIASIQSATAESVDVIREVSGTIERLSHISATIAAAIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQGAATQEISRNVQHTAQGTQRVSDNIVEVQQGTAETGSASAQVLSAAQSLAEESSRLKL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EVGHFLENVRAA
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]