Click here to switch to the map view.

The map label for this gene is 146343014

Identifier: 146343014

GI number: 146343014

Start: 6436326

End: 6436910

Strand: Reverse

Name: 146343014

Synonym: BRADO6199

Alternate gene names: NA

Gene position: 6436910-6436326 (Counterclockwise)

Preceding gene: 146343015

Following gene: 146343013

Centisome position: 86.33

GC content: 49.4

Gene sequence:

>585_bases
GTGCGTGATCTGCGACGAAGTACACTCGGCTCGCTGTGCATGCTCTTGCTTGTGCAGTCCTCCAACGCACAGAATTACCC
AGCTCCACAATGTCTACCAATTGTCACTTCTAACATCTCCCCCCAGCTCGAGTTTTTCGAAGGCAGTATGTTTCCGTCAG
GTCTTGCCTTATCTGCTCGACGCAACGCTGAATATCTCCTTGAGAAGTTGGCGGCTGTAGATAGCGGCTCATCGCTTGCT
CAAGCTTATGTCCTGAATTTCGGGCCGGTATCAATTTTCTTTCCAGCCAAGGAGTGTCCAAACGGGTGCACGGCTTACCT
CGTCCGAAATGACGAACATGTGCGTCTGATTAGACCGATTTCGTTCTTTTCTCACATGATAATAGTGTCTCATCCAATGT
TTTCTTGGGTTTTCCTCGCCGAGGACGGCAATCGATTCGTTGAAATCCGATCCAGTAAGGCAGGAGTAGAAGTCCATGAG
TGGAGCGAATTACCAATGAGATTGTATCCGTCGCTAGCAAAGTCCTGTTTAGTTAGTGGAGCGTTTGGTAAGCTCGCACC
GGCGTCAAACGAAGATCGTCAGTAG

Upstream 100 bases:

>100_bases
GAAGGGAGTGGCGAGCCTTTTGGATCGAGCGGTAATGCCAGAAAAAGTTGGACTAGGCACACGGACAGGAGCGTTGGTGT
ATTGCTTCAGGGCGCTTATG

Downstream 100 bases:

>100_bases
AAGAGGTGGACATTTCTCATGGCAGATACAGAGTGGAATCTCCCATTTGCCCCGACGATGGTTATCGGGAAGGTCTCTGT
CGATTACAGCAGCTTTTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MRDLRRSTLGSLCMLLLVQSSNAQNYPAPQCLPIVTSNISPQLEFFEGSMFPSGLALSARRNAEYLLEKLAAVDSGSSLA
QAYVLNFGPVSIFFPAKECPNGCTAYLVRNDEHVRLIRPISFFSHMIIVSHPMFSWVFLAEDGNRFVEIRSSKAGVEVHE
WSELPMRLYPSLAKSCLVSGAFGKLAPASNEDRQ

Sequences:

>Translated_194_residues
MRDLRRSTLGSLCMLLLVQSSNAQNYPAPQCLPIVTSNISPQLEFFEGSMFPSGLALSARRNAEYLLEKLAAVDSGSSLA
QAYVLNFGPVSIFFPAKECPNGCTAYLVRNDEHVRLIRPISFFSHMIIVSHPMFSWVFLAEDGNRFVEIRSSKAGVEVHE
WSELPMRLYPSLAKSCLVSGAFGKLAPASNEDRQ
>Mature_194_residues
MRDLRRSTLGSLCMLLLVQSSNAQNYPAPQCLPIVTSNISPQLEFFEGSMFPSGLALSARRNAEYLLEKLAAVDSGSSLA
QAYVLNFGPVSIFFPAKECPNGCTAYLVRNDEHVRLIRPISFFSHMIIVSHPMFSWVFLAEDGNRFVEIRSSKAGVEVHE
WSELPMRLYPSLAKSCLVSGAFGKLAPASNEDRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21491; Mature: 21491

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDLRRSTLGSLCMLLLVQSSNAQNYPAPQCLPIVTSNISPQLEFFEGSMFPSGLALSAR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCEEEECC
RNAEYLLEKLAAVDSGSSLAQAYVLNFGPVSIFFPAKECPNGCTAYLVRNDEHVRLIRPI
CCHHHHHHHHHHCCCCCHHHHEEEEECCCEEEEECHHHCCCCCEEEEEECCCCEEEEEHH
SFFSHMIIVSHPMFSWVFLAEDGNRFVEIRSSKAGVEVHEWSELPMRLYPSLAKSCLVSG
HHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHCC
AFGKLAPASNEDRQ
CCCCCCCCCCCCCC
>Mature Secondary Structure
MRDLRRSTLGSLCMLLLVQSSNAQNYPAPQCLPIVTSNISPQLEFFEGSMFPSGLALSAR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCEEEECC
RNAEYLLEKLAAVDSGSSLAQAYVLNFGPVSIFFPAKECPNGCTAYLVRNDEHVRLIRPI
CCHHHHHHHHHHCCCCCHHHHEEEEECCCEEEEECHHHCCCCCEEEEEECCCCEEEEEHH
SFFSHMIIVSHPMFSWVFLAEDGNRFVEIRSSKAGVEVHEWSELPMRLYPSLAKSCLVSG
HHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHCC
AFGKLAPASNEDRQ
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA