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The map label for this gene is hlyD [H]

Identifier: 146343015

GI number: 146343015

Start: 6437645

End: 6439054

Strand: Reverse

Name: hlyD [H]

Synonym: BRADO6200

Alternate gene names: 146343015

Gene position: 6439054-6437645 (Counterclockwise)

Preceding gene: 146343016

Following gene: 146343014

Centisome position: 86.35

GC content: 67.09

Gene sequence:

>1410_bases
TTGGACGCGCATCGCCGCAGGCGAAACGACGCGCGCGAATTCCTGCCCGCGGCGCTGGAAATCGTTGAGACACCAGCCTC
GCCTGCGGGCCGCGCCGTGGCTGGAACCATCATGCTGTTCTTCGCGATCGCGGTCGGCTGGTCGATCATCGGCCATGTCG
ACATCATCGCCGCGGCACAGGGCAAGATCGTGCCGACCGGCCGCACCAAGACGATCCAGCCGCTGGAGGCGGGCGTGGTC
GCCGCGATCCATGTCCAGGACGGCGACAAGGTCCGTGCCGGCGACGTGCTGGTCGAGCTCGACCGCACCGTCACCGAGGC
CGAGCGCCACCGCGTGGCGCAGGGCCTGATGCAGGCGAGGCTCGATGTGGCCCGGCTGAGCGTGCTTCGTGATAGCTTTG
CCGATCTCGCCGCGTTGCGGCCGCTCAGCGTGCCCGAGGGCGCGCCGCCGACCGACATCGCGCGCACCCGCGCCGCGCTG
CAGGCGCAGGCCGCCGAGCAGCTGTCCAAGCTCGCCTCCAACCAGCAGCAGATCGCGCAGAAACGCGCCGAGGTGCAGTC
GATCGAGGCCGCGATTGCCAAGATCGACGCCGCTCTGCCGTTCCTGCGGGAGACCGCCGATATCCGCCGCAACGCCAAGG
AGATCCAGTATGGCAACCAGATCGCCTTCATCGACGCGCAGTCGCGGCTGATCGACCAGCAGAGCGAGCGCGTCGTGCAG
ACAAGGCGCCTGGTCGAGATCGAGGCCGCGCGAATGGCGCTGGAGCAGCAGCTGGCACAGACCCGCTCCGGCTTCGAGCG
GCAGGTGCTGTCCGATCTCACTGACGCCGAGAAGAAGGCCGACGAGCTGACACAGGACCTCGTCAAGGCCGAGCGCAAGA
CGTCTGAGCAGCTGCTGCGCGCGCCGATCGACGGCACCGTGCAGCAGCTCGCACTGCACACCGTCGGCGGCGTCGTCACA
CCGGCGCAACAACTGATGCTCATCGTGCCCGCCGACAGCCAGCTCGAGACCGAGGTCATGATCTCCAACCGCGACATCGG
CTTCGTCAATGTCGGCCAGCCGGCCGAGATCAAGATCGACACCTTCAACTTCACCCGCTACGGCCTCGTCCACGGCAAGG
TGCTGAGCGTCTCCCAGGATTCGATCGTACGGGAGAAGCCGGCGGACAAGCAGGCCGGCGGCAAGGCGGCCGGCGCCCTG
GCTGAGACCAGCGAGCCGGCGGGGCAGGAGTTCATCTACTCGGCGAGGGTGTCGCTGGACGAGAAGCAGATGCAGGTGGA
GGACAAGATGGTCGCACTGTCGCCGGGCATGGCGGTGACAGTGGAGATCAAGACAGGGACGAGACGGATCATCGAGTACA
TTATGTCGCCCCTGCTGCGATACAAGCACGAGAGCTTGCGCGATCGATGA

Upstream 100 bases:

>100_bases
CTGATCAAGCGTGCCGGGCGCTACGCCACCCTGCATCAGATCCAGGCGGGCCTGCATGTCGTCGGCTGAGGCACACCGGC
AGGACAACGCGCCGGTTTCG

Downstream 100 bases:

>100_bases
AGCCTGTCAGGACGAGCGAGTTATTTGGAGCGATTGGAATAGATAGGGCGGATCGCGCAGCGTACGCCGATGCTCCAAAA
ACCAGATATTGCTGGAGGCT

Product: HlyD family secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MDAHRRRRNDAREFLPAALEIVETPASPAGRAVAGTIMLFFAIAVGWSIIGHVDIIAAAQGKIVPTGRTKTIQPLEAGVV
AAIHVQDGDKVRAGDVLVELDRTVTEAERHRVAQGLMQARLDVARLSVLRDSFADLAALRPLSVPEGAPPTDIARTRAAL
QAQAAEQLSKLASNQQQIAQKRAEVQSIEAAIAKIDAALPFLRETADIRRNAKEIQYGNQIAFIDAQSRLIDQQSERVVQ
TRRLVEIEAARMALEQQLAQTRSGFERQVLSDLTDAEKKADELTQDLVKAERKTSEQLLRAPIDGTVQQLALHTVGGVVT
PAQQLMLIVPADSQLETEVMISNRDIGFVNVGQPAEIKIDTFNFTRYGLVHGKVLSVSQDSIVREKPADKQAGGKAAGAL
AETSEPAGQEFIYSARVSLDEKQMQVEDKMVALSPGMAVTVEIKTGTRRIIEYIMSPLLRYKHESLRDR

Sequences:

>Translated_469_residues
MDAHRRRRNDAREFLPAALEIVETPASPAGRAVAGTIMLFFAIAVGWSIIGHVDIIAAAQGKIVPTGRTKTIQPLEAGVV
AAIHVQDGDKVRAGDVLVELDRTVTEAERHRVAQGLMQARLDVARLSVLRDSFADLAALRPLSVPEGAPPTDIARTRAAL
QAQAAEQLSKLASNQQQIAQKRAEVQSIEAAIAKIDAALPFLRETADIRRNAKEIQYGNQIAFIDAQSRLIDQQSERVVQ
TRRLVEIEAARMALEQQLAQTRSGFERQVLSDLTDAEKKADELTQDLVKAERKTSEQLLRAPIDGTVQQLALHTVGGVVT
PAQQLMLIVPADSQLETEVMISNRDIGFVNVGQPAEIKIDTFNFTRYGLVHGKVLSVSQDSIVREKPADKQAGGKAAGAL
AETSEPAGQEFIYSARVSLDEKQMQVEDKMVALSPGMAVTVEIKTGTRRIIEYIMSPLLRYKHESLRDR
>Mature_469_residues
MDAHRRRRNDAREFLPAALEIVETPASPAGRAVAGTIMLFFAIAVGWSIIGHVDIIAAAQGKIVPTGRTKTIQPLEAGVV
AAIHVQDGDKVRAGDVLVELDRTVTEAERHRVAQGLMQARLDVARLSVLRDSFADLAALRPLSVPEGAPPTDIARTRAAL
QAQAAEQLSKLASNQQQIAQKRAEVQSIEAAIAKIDAALPFLRETADIRRNAKEIQYGNQIAFIDAQSRLIDQQSERVVQ
TRRLVEIEAARMALEQQLAQTRSGFERQVLSDLTDAEKKADELTQDLVKAERKTSEQLLRAPIDGTVQQLALHTVGGVVT
PAQQLMLIVPADSQLETEVMISNRDIGFVNVGQPAEIKIDTFNFTRYGLVHGKVLSVSQDSIVREKPADKQAGGKAAGAL
AETSEPAGQEFIYSARVSLDEKQMQVEDKMVALSPGMAVTVEIKTGTRRIIEYIMSPLLRYKHESLRDR

Specific function: Involved in the transport of hemolysin A [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003997
- InterPro:   IPR006143
- InterPro:   IPR006144
- InterPro:   IPR010129 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 51299; Mature: 51299

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS00543 HLYD_FAMILY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAHRRRRNDAREFLPAALEIVETPASPAGRAVAGTIMLFFAIAVGWSIIGHVDIIAAAQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
GKIVPTGRTKTIQPLEAGVVAAIHVQDGDKVRAGDVLVELDRTVTEAERHRVAQGLMQAR
CEEEECCCCCCCCHHCCCEEEEEEECCCCCEECCCEEEEHHHHHHHHHHHHHHHHHHHHH
LDVARLSVLRDSFADLAALRPLSVPEGAPPTDIARTRAALQAQAAEQLSKLASNQQQIAQ
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KRAEVQSIEAAIAKIDAALPFLRETADIRRNAKEIQYGNQIAFIDAQSRLIDQQSERVVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEEEEEHHHHHHHHHHHHHHH
TRRLVEIEAARMALEQQLAQTRSGFERQVLSDLTDAEKKADELTQDLVKAERKTSEQLLR
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APIDGTVQQLALHTVGGVVTPAQQLMLIVPADSQLETEVMISNRDIGFVNVGQPAEIKID
CCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEECCCCCEEEEE
TFNFTRYGLVHGKVLSVSQDSIVREKPADKQAGGKAAGALAETSEPAGQEFIYSARVSLD
EECCEEEEEEECEEEEECHHHHHHCCCCCCCCCCCHHCCHHCCCCCCCHHHHHHHHCCCC
EKQMQVEDKMVALSPGMAVTVEIKTGTRRIIEYIMSPLLRYKHESLRDR
HHHHHHHHHHEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDAHRRRRNDAREFLPAALEIVETPASPAGRAVAGTIMLFFAIAVGWSIIGHVDIIAAAQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
GKIVPTGRTKTIQPLEAGVVAAIHVQDGDKVRAGDVLVELDRTVTEAERHRVAQGLMQAR
CEEEECCCCCCCCHHCCCEEEEEEECCCCCEECCCEEEEHHHHHHHHHHHHHHHHHHHHH
LDVARLSVLRDSFADLAALRPLSVPEGAPPTDIARTRAALQAQAAEQLSKLASNQQQIAQ
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KRAEVQSIEAAIAKIDAALPFLRETADIRRNAKEIQYGNQIAFIDAQSRLIDQQSERVVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEEEEEHHHHHHHHHHHHHHH
TRRLVEIEAARMALEQQLAQTRSGFERQVLSDLTDAEKKADELTQDLVKAERKTSEQLLR
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APIDGTVQQLALHTVGGVVTPAQQLMLIVPADSQLETEVMISNRDIGFVNVGQPAEIKID
CCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEECCCCCEEEEE
TFNFTRYGLVHGKVLSVSQDSIVREKPADKQAGGKAAGALAETSEPAGQEFIYSARVSLD
EECCEEEEEEECEEEEECHHHHHHCCCCCCCCCCCHHCCHHCCCCCCCHHHHHHHHCCCC
EKQMQVEDKMVALSPGMAVTVEIKTGTRRIIEYIMSPLLRYKHESLRDR
HHHHHHHHHHEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3891743; 1495479 [H]