Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is yejH [C]

Identifier: 146342677

GI number: 146342677

Start: 6060551

End: 6062515

Strand: Reverse

Name: yejH [C]

Synonym: BRADO5844

Alternate gene names: 146342677

Gene position: 6062515-6060551 (Counterclockwise)

Preceding gene: 146342680

Following gene: 146342676

Centisome position: 81.3

GC content: 59.85

Gene sequence:

>1965_bases
ATGAGCTATAGAATGGTAACCGAGGGAAGAGCCGTGACCCGAGACCAGCCCAACCTTCTTGGGACAACAGAACGCGATCG
CGAAATCGCGGCCCTCCGCGAGCGGTTGGCACGGCTCGAATCCGAAAAGGCAGAACTACAAGCCAATCTCAAGAGGCTGA
TCTCCGCTCCGGAAGCTCATCGCAGCCCGCATCTTGCCGGCGGCGTCTCGGTGACAAATGCCTCGAGCCCCGCCACCAAG
ATAGCTCTGTTTCGTTCGCTATTTCGAGGCCGACATGATGTGTTCCCGAAGCGTTGGGAGAACGCGAAGACTGGCAAGGC
AGGCTATGCCCCGGCCTGTGCCAATGAGTGGATGCCGCGAATCTGCGGCAAGCCGAAAGCAAAGTGCGGTGACTGTCCGC
ATCATGCCTTCCTTCCCGTCACCGATGATGTGATCGGTGGACACCTCCGTGGACACCATACGATTGGTGTCTATCCTCTC
CTGACGGATGAAACTTGCTGGTTTCTGGCAGTCGATTTTGACAAGGCGACTTGGACGAATGATTCCGCCGCTTTCCTGCA
AGCATGCTCGGCGCGCGGCATTCCGGCGGCGCTCGAGCGTTCCCGTTCAGGGCAAGGGGCTCACGTGTGGATTTTCTTCG
CGGAGCCGGTTACGGCCGCGATCGCGCGTCGGCTCGGCGCGCATCTCATCACGGAGACCATGGAGCGCAATCCAGACATC
GGCTTTTCGTCCTATGACCGGTTCTTCCCCAGTCAGGATAGTATGCCGGCAGGCGGTTTCGGCAATCTCATCGCGCTTCC
CTTGCAACATGATCCGCGCTCGACTGGGAACAGCCTTTTTCTCGACGAGACGACCTTCGAGCCTTATTCCGATCAATGGG
CTTTCCTTGCGACGGTCAGGCGTATGACGCTTACAGAGGCAACAGCGGTTGCGGAAGAGGCCGGAAGACAGGGACGAGTG
ACGGGACTGCATTTGCCTCTGGATGAGGAGGACGATGCGCCTTGGGCCGTGCCGCCCTCCCGGCGGAAACCGGAGATCTC
GATTACCGGACCCATGCCTGACCGCATCGATGTCGTGCTGGCAGACCAGATCTATATGCAGCGTGAAGGGCTTCCCGCCA
GCCTCGTCAATCGGCTCATTCGGCTGGCCGCTTTTCAGAACCCGGCGTTCTACAGCGCACAAGCCATGCGGCTTTCGACA
TTTGGCCTTCCGCGCATTATTGCATGCGCCGAACTGCTTTCGCATCACATGGCCCTGCCACGCGGGTGCCGTGAGGGTCT
TGCGGAGTTGGCGAGCGGCCTGAACGTCGATCTGCGCTGGCAGGATAAACGAAACGCGGGAGCCGACATCCAGGCGCGCT
TTCTTGGGACGCTGACCAAGGAGCAGAAGACAGCAGTCACAGCCCTGCTGGCGCACGAAACCGGCGTGCTGGCAGCGACT
ACGGGATTCGGGAAGACGGTCGTGGCGGCGGCGATGATTGCCGAACGCAAGGCCTCCACGCTCATCCTCGTGCATCGCCG
TCAGCTCATGGAGCAATGGGCCACACGTCTGCAAAGCTTCCTCGATTTGCCGCAGCACAGTATCGGCCAGGTCGGTGGAG
GAGCGCGCAAACCGACTGGCATCATTGACATCGCGATGATCCAAAGCCTTGCCCGCGGGGGCGTGGTGGATGATCTGGTT
GCTGGATATGGCCAACTGATTGTCGATGAATGCCATCATCTTTCGGCCGTCAGCTTCGAGGCGGTCGTCACCCGCAAAGA
CGGTCATCACACGATCATCTTCATGCAATGTGGTCCCGTACGTTTCCGTGTAGATGCAAAATCTCAAGCCGCTCGACGTC
CCTTCGGTCTCGCGTCGTGCGGCGCAGAACATTCTTCGTGCTTCCACCTGAGCTCCAGTACGATCGTCCGCCGATTCAGC
AGGTCTACGCGGCGCTTGCCGCTGACGAGGCTCGCAACGCTATGA

Upstream 100 bases:

>100_bases
ATGGGTGGTCATGGTCGGATCCTTGCCGGGTCCCAATATATGACGTCCCTCAATTAACTGCAATATCTGAAATGTTCTGC
TGAAGGCGCGGACCTCGGCA

Downstream 100 bases:

>100_bases
TCTTTGACGATGTCTTACAGGCGCTGGAGCATAAGCGGTCGCCGGTCATCTTGACCGAGCGCAGGGACCACGCGTTGCTC
CTGGCCGAGAGGCTGTCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Type III Restriction Res Subunit; Helicase; Superfamily II DNA/RNA Helicase; Type III Restriction Res Subunit Family; DNA/RNA Repair Helicase; ATP-Dependet DEAD/DEAH Box Helicase; ATP-Dependent Helicase; Type III Restriction Protein; Nucleic Acid ATP-Dependent Helicase; DEAD/DEAH Box Helicase; DNA Repair Protein RAD; DNA/RNA Helicase; ATP-Dependent RNA Helicase; Type III Restriction- System Subunit Res; DNA Or RNA Helicase Of Superfamily II-Like Protein; Restriction Endonuclease Family Protein; DNA Or RNA Helicases Of Superfamily II; DEAD/DEAH Box Family Helicase; DNA Helicase

Number of amino acids: Translated: 654; Mature: 653

Protein sequence:

>654_residues
MSYRMVTEGRAVTRDQPNLLGTTERDREIAALRERLARLESEKAELQANLKRLISAPEAHRSPHLAGGVSVTNASSPATK
IALFRSLFRGRHDVFPKRWENAKTGKAGYAPACANEWMPRICGKPKAKCGDCPHHAFLPVTDDVIGGHLRGHHTIGVYPL
LTDETCWFLAVDFDKATWTNDSAAFLQACSARGIPAALERSRSGQGAHVWIFFAEPVTAAIARRLGAHLITETMERNPDI
GFSSYDRFFPSQDSMPAGGFGNLIALPLQHDPRSTGNSLFLDETTFEPYSDQWAFLATVRRMTLTEATAVAEEAGRQGRV
TGLHLPLDEEDDAPWAVPPSRRKPEISITGPMPDRIDVVLADQIYMQREGLPASLVNRLIRLAAFQNPAFYSAQAMRLST
FGLPRIIACAELLSHHMALPRGCREGLAELASGLNVDLRWQDKRNAGADIQARFLGTLTKEQKTAVTALLAHETGVLAAT
TGFGKTVVAAAMIAERKASTLILVHRRQLMEQWATRLQSFLDLPQHSIGQVGGGARKPTGIIDIAMIQSLARGGVVDDLV
AGYGQLIVDECHHLSAVSFEAVVTRKDGHHTIIFMQCGPVRFRVDAKSQAARRPFGLASCGAEHSSCFHLSSSTIVRRFS
RSTRRLPLTRLATL

Sequences:

>Translated_654_residues
MSYRMVTEGRAVTRDQPNLLGTTERDREIAALRERLARLESEKAELQANLKRLISAPEAHRSPHLAGGVSVTNASSPATK
IALFRSLFRGRHDVFPKRWENAKTGKAGYAPACANEWMPRICGKPKAKCGDCPHHAFLPVTDDVIGGHLRGHHTIGVYPL
LTDETCWFLAVDFDKATWTNDSAAFLQACSARGIPAALERSRSGQGAHVWIFFAEPVTAAIARRLGAHLITETMERNPDI
GFSSYDRFFPSQDSMPAGGFGNLIALPLQHDPRSTGNSLFLDETTFEPYSDQWAFLATVRRMTLTEATAVAEEAGRQGRV
TGLHLPLDEEDDAPWAVPPSRRKPEISITGPMPDRIDVVLADQIYMQREGLPASLVNRLIRLAAFQNPAFYSAQAMRLST
FGLPRIIACAELLSHHMALPRGCREGLAELASGLNVDLRWQDKRNAGADIQARFLGTLTKEQKTAVTALLAHETGVLAAT
TGFGKTVVAAAMIAERKASTLILVHRRQLMEQWATRLQSFLDLPQHSIGQVGGGARKPTGIIDIAMIQSLARGGVVDDLV
AGYGQLIVDECHHLSAVSFEAVVTRKDGHHTIIFMQCGPVRFRVDAKSQAARRPFGLASCGAEHSSCFHLSSSTIVRRFS
RSTRRLPLTRLATL
>Mature_653_residues
SYRMVTEGRAVTRDQPNLLGTTERDREIAALRERLARLESEKAELQANLKRLISAPEAHRSPHLAGGVSVTNASSPATKI
ALFRSLFRGRHDVFPKRWENAKTGKAGYAPACANEWMPRICGKPKAKCGDCPHHAFLPVTDDVIGGHLRGHHTIGVYPLL
TDETCWFLAVDFDKATWTNDSAAFLQACSARGIPAALERSRSGQGAHVWIFFAEPVTAAIARRLGAHLITETMERNPDIG
FSSYDRFFPSQDSMPAGGFGNLIALPLQHDPRSTGNSLFLDETTFEPYSDQWAFLATVRRMTLTEATAVAEEAGRQGRVT
GLHLPLDEEDDAPWAVPPSRRKPEISITGPMPDRIDVVLADQIYMQREGLPASLVNRLIRLAAFQNPAFYSAQAMRLSTF
GLPRIIACAELLSHHMALPRGCREGLAELASGLNVDLRWQDKRNAGADIQARFLGTLTKEQKTAVTALLAHETGVLAATT
GFGKTVVAAAMIAERKASTLILVHRRQLMEQWATRLQSFLDLPQHSIGQVGGGARKPTGIIDIAMIQSLARGGVVDDLVA
GYGQLIVDECHHLSAVSFEAVVTRKDGHHTIIFMQCGPVRFRVDAKSQAARRPFGLASCGAEHSSCFHLSSSTIVRRFSR
STRRLPLTRLATL

Specific function: Unknown

COG id: COG4951

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71678; Mature: 71547

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYRMVTEGRAVTRDQPNLLGTTERDREIAALRERLARLESEKAELQANLKRLISAPEAH
CCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RSPHLAGGVSVTNASSPATKIALFRSLFRGRHDVFPKRWENAKTGKAGYAPACANEWMPR
CCCCCCCCEEEECCCCCHHHHHHHHHHHCCHHHCCCHHCCCCCCCCCCCCCHHHHHHHHH
ICGKPKAKCGDCPHHAFLPVTDDVIGGHLRGHHTIGVYPLLTDETCWFLAVDFDKATWTN
HCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCC
DSAAFLQACSARGIPAALERSRSGQGAHVWIFFAEPVTAAIARRLGAHLITETMERNPDI
CHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCC
GFSSYDRFFPSQDSMPAGGFGNLIALPLQHDPRSTGNSLFLDETTFEPYSDQWAFLATVR
CCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
RMTLTEATAVAEEAGRQGRVTGLHLPLDEEDDAPWAVPPSRRKPEISITGPMPDRIDVVL
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEE
ADQIYMQREGLPASLVNRLIRLAAFQNPAFYSAQAMRLSTFGLPRIIACAELLSHHMALP
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCC
RGCREGLAELASGLNVDLRWQDKRNAGADIQARFLGTLTKEQKTAVTALLAHETGVLAAT
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
TGFGKTVVAAAMIAERKASTLILVHRRQLMEQWATRLQSFLDLPQHSIGQVGGGARKPTG
CCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCC
IIDIAMIQSLARGGVVDDLVAGYGQLIVDECHHLSAVSFEAVVTRKDGHHTIIFMQCGPV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEEEEEECCCE
RFRVDAKSQAARRPFGLASCGAEHSSCFHLSSSTIVRRFSRSTRRLPLTRLATL
EEEECCHHHHHCCCCCCHHCCCCCCCEEEECHHHHHHHHHHHHHCCCHHHHHCC
>Mature Secondary Structure 
SYRMVTEGRAVTRDQPNLLGTTERDREIAALRERLARLESEKAELQANLKRLISAPEAH
CCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RSPHLAGGVSVTNASSPATKIALFRSLFRGRHDVFPKRWENAKTGKAGYAPACANEWMPR
CCCCCCCCEEEECCCCCHHHHHHHHHHHCCHHHCCCHHCCCCCCCCCCCCCHHHHHHHHH
ICGKPKAKCGDCPHHAFLPVTDDVIGGHLRGHHTIGVYPLLTDETCWFLAVDFDKATWTN
HCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCC
DSAAFLQACSARGIPAALERSRSGQGAHVWIFFAEPVTAAIARRLGAHLITETMERNPDI
CHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCC
GFSSYDRFFPSQDSMPAGGFGNLIALPLQHDPRSTGNSLFLDETTFEPYSDQWAFLATVR
CCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
RMTLTEATAVAEEAGRQGRVTGLHLPLDEEDDAPWAVPPSRRKPEISITGPMPDRIDVVL
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEE
ADQIYMQREGLPASLVNRLIRLAAFQNPAFYSAQAMRLSTFGLPRIIACAELLSHHMALP
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCC
RGCREGLAELASGLNVDLRWQDKRNAGADIQARFLGTLTKEQKTAVTALLAHETGVLAAT
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
TGFGKTVVAAAMIAERKASTLILVHRRQLMEQWATRLQSFLDLPQHSIGQVGGGARKPTG
CCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCC
IIDIAMIQSLARGGVVDDLVAGYGQLIVDECHHLSAVSFEAVVTRKDGHHTIIFMQCGPV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEEEEEECCCE
RFRVDAKSQAARRPFGLASCGAEHSSCFHLSSSTIVRRFSRSTRRLPLTRLATL
EEEECCHHHHHCCCCCCHHCCCCCCCEEEECHHHHHHHHHHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA