| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is bepE [H]
Identifier: 146342613
GI number: 146342613
Start: 5979288
End: 5981837
Strand: Direct
Name: bepE [H]
Synonym: BRADO5777
Alternate gene names: 146342613
Gene position: 5979288-5981837 (Clockwise)
Preceding gene: 146342609
Following gene: 146342616
Centisome position: 80.19
GC content: 65.33
Gene sequence:
>2550_bases ATGGCGGAATTGTCGAAAAGCTTCCCGCAAGGAATTCAATACGACACGCCGTTCGACACCACCAAGTTCGTCAATGCCTC GATCCACGAGGTCTACAAGACCTTGATCGAGGCCGGCGTGCTGGTGCTGATCGTGATCCTGATCTTCCTGCAGGACTGGC GCGCGATGCTGGTGCCGACCACGACGGTGCCGGTGACGATCATCGGCGCCTTCGCGGCGATGGCGGCGCTCGGCTTCACC ATCAACCTCTCGACCCTGTTCGCCATCGTGCTGGCGATCGGCATCGTGGTGGACGACGCGATCGTCGTCGTCGAGGGCGC GGCCCACAATATCGAGCGCGGCATGAACGGCCACGACGCGGCGATCCGAGCGATGGACCAGCTGTTCGCACCGATCGTTG GCGTCACGCTGGTGCTGATCGCCGTGTTCCTGCCCGCCGCCTTTCTGCCCGGCCTCACAGGGAGGATTTACGCCCAATTC GCGCTGGTCATCGCCGCGACCGCCCTTCTCTCGGCCATCAATGCAGCAATGTTGAAACCGACGCAACGCGCGCTGTGGCT GCGGCCTCCGGTGCCGGTGGAGAAGCGCAACATCGTCTATCGGGCCTTTAACAATCTCTATGCGCGGCTGGAGCGGCGCT ACACCAATCTCATCGGGCGGCTTGTCAGGCACAGCACCGCATCCGTCGTCATCGCCCTGATCCTGATCGCAGCCGGCGGC TATGGATTGTCGCGGGTGCCGACCGGCTTCCTGCCGATCGAGGACCAGGGCTATCTGATCGCCGCCATGCAGCTGCCCGA CGGCGCCTCGCTGGAGCGGACCCAGAAGGCGCTCGACAGGGTCGGCACCATCGCGAAGGCCACGCCCGGCGTCGCCCAAA TCATCACCATCGCCGGCATCTCCGCGCTCGACAACAGCGCCAGCCTCGCCAATTCCGGCGTCGCCTACATCATCCTCACG GACTGGGAGTCGCGCGGCCAGGGTGAGGACCTGCGCTCCCTCGTCTACGGCCTCAACCACAGGCTCGCCGAGGTGATCGA GGCGCGCAGCCTGGTGCTGCCGCCGCCGCCGATCCAGGGTATCGGCAATGCCGCCGGCTTCGCCATGCAGGTCGAGCTGC GCGACGGCAACAGCGATTACGCCAAGCTCCAAGCGATGACGTCCGCGATCGTCGCCAGCGCTCAGAGCCAGAGCACGCTG CAGCGCGTCCAATCGCCGTTCCGCGCCATGGTGCCGCAGTTCGACGTCGAGATCGACCGGGTGAAGACGCAGACCCTCCA CGTTACCACCGACCAGGTGTTCTCGGCCTTGTCGTCCTACCTCGGCGCCTCCTACGTCAACCAGTTCAACAAGTTCGGCC GCGTGTTCCAGGTCTATGTGCAGGCCGATTCCACCGCGCGGCTGACGCCGCGGCAGATCGAGAGCCTGATGGTGCGCAAC CAGAGCGGCGACATGATCCCGCTCGGCACGGTGGCGACGGTCAAGCCCGCGGTCGGACCGTCGCTGATCAGCCTCTACAA TCTTTATCCCTCCGCCACCGTCGTCGGCCTGCCGGCGCAGGGCTATTCGTCCGGGCAGTCGCTCAAGCTGATGGAACAGA TCGCGCAACAGACGCTTCCACCGGGCGCGGGTTATGAATGGACTGCGATGTCGTATCAGGAGAAGGCCGTCTCGAATCAG ATCTATCTCACCTTCGGTCTTGCTCTCCTCCTCGTCTATCTCGTGCTCGCCGGCCAGTATGAAAGCTGGTACGCGCCGGT CTCAGTCATCCTCGCGGTGCCGCTGTCGCTGCTCGGGCCGATGGCGGTGCTGCTACTGCGTTCGCAGCGGCGTCTCCTTC AATCCGTTGGCGTCGTAAGCCTTGCGCAGCAGCCCGTTCGAGGCCGCGTCGGTCATGAAGCTGCTGACGAAGGCCAGCGC CTTGTCATGCCCGAGCGGGACAGCCACCGCCGTCACCGTCTTCTTGAAGGTCTCGTCGAGCACCCGCGTGCCCGGGATCT TCCTGGCCATCGCGTCGAGCTGGTCGCGCGACAGGGCGAAGGCATCGATCTCGCCTCGCTGCAGCAGGCCGAAGATCTCG TCATAGGTCTGATAGCCGGTGACGCTGGCGTTCTTCAGATGCGCCTTGGCGCCGCGCATCGTCGTCGTGTTGTTCACGGC CGCGACCTTGATGCCCGGCTGGTCGAGGGCCGAAAAGCTCGTTACCGGCGAGCCCGGCTTGACGATGTAGGTCGCATCCG CGACCTCGTAGATCGGGCCGAACGCCATCCTGGTCTCGCGCTCCGGATCCTTCGGCAGGAACGTCACATCCCAGGTGCCC TTGTCGGCCGCATCGGTGATCTGGCCGGAGTTCTGGTGCACGACGTAGTCGACGGGCACACCGAGCCTGTCGGCCATCGC GCGGCCGAGATCGACGGGGACGCCGGAATAGCCGGTCTCGGTCCTGGTCGACCAGAACGCGCCGCCCGCGGGGCTGATCG CGATCGCCACGCGCAGCTTGCCGGTGGGCGCGATCTCGTCCTTCAGCTCGGCGGCTCCGCCGTGAGATGA
Upstream 100 bases:
>100_bases TGTTTGTTGCTTGCCACTGCCATTGTCTCGACAGTCATTGCATATGGACCGCGGAATGACGCCGAGCAATTCTCCCCGAC AGTCCCGCTCGACATCGAAG
Downstream 100 bases:
>100_bases TGTCATCATGCTCGCCACGACGGCCAGCGCCGCCACGAGCAGCCCGCGCCACCGGCCCATCGTTCCCTCCCCGTTGTGTT GGTGGACATCATGACGTGCG
Product: AcrB family metabolite exporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 849; Mature: 848
Protein sequence:
>849_residues MAELSKSFPQGIQYDTPFDTTKFVNASIHEVYKTLIEAGVLVLIVILIFLQDWRAMLVPTTTVPVTIIGAFAAMAALGFT INLSTLFAIVLAIGIVVDDAIVVVEGAAHNIERGMNGHDAAIRAMDQLFAPIVGVTLVLIAVFLPAAFLPGLTGRIYAQF ALVIAATALLSAINAAMLKPTQRALWLRPPVPVEKRNIVYRAFNNLYARLERRYTNLIGRLVRHSTASVVIALILIAAGG YGLSRVPTGFLPIEDQGYLIAAMQLPDGASLERTQKALDRVGTIAKATPGVAQIITIAGISALDNSASLANSGVAYIILT DWESRGQGEDLRSLVYGLNHRLAEVIEARSLVLPPPPIQGIGNAAGFAMQVELRDGNSDYAKLQAMTSAIVASAQSQSTL QRVQSPFRAMVPQFDVEIDRVKTQTLHVTTDQVFSALSSYLGASYVNQFNKFGRVFQVYVQADSTARLTPRQIESLMVRN QSGDMIPLGTVATVKPAVGPSLISLYNLYPSATVVGLPAQGYSSGQSLKLMEQIAQQTLPPGAGYEWTAMSYQEKAVSNQ IYLTFGLALLLVYLVLAGQYESWYAPVSVILAVPLSLLGPMAVLLLRSQRRLLQSVGVVSLAQQPVRGRVGHEAADEGQR LVMPERDSHRRHRLLEGLVEHPRARDLPGHRVELVARQGEGIDLASLQQAEDLVIGLIAGDAGVLQMRLGAAHRRRVVHG RDLDARLVEGRKARYRRARLDDVGRIRDLVDRAERHPGLALRILRQERHIPGALVGRIGDLAGVLVHDVVDGHTEPVGHR AAEIDGDAGIAGLGPGRPERAARGADRDRHAQLAGGRDLVLQLGGSAVR
Sequences:
>Translated_849_residues MAELSKSFPQGIQYDTPFDTTKFVNASIHEVYKTLIEAGVLVLIVILIFLQDWRAMLVPTTTVPVTIIGAFAAMAALGFT INLSTLFAIVLAIGIVVDDAIVVVEGAAHNIERGMNGHDAAIRAMDQLFAPIVGVTLVLIAVFLPAAFLPGLTGRIYAQF ALVIAATALLSAINAAMLKPTQRALWLRPPVPVEKRNIVYRAFNNLYARLERRYTNLIGRLVRHSTASVVIALILIAAGG YGLSRVPTGFLPIEDQGYLIAAMQLPDGASLERTQKALDRVGTIAKATPGVAQIITIAGISALDNSASLANSGVAYIILT DWESRGQGEDLRSLVYGLNHRLAEVIEARSLVLPPPPIQGIGNAAGFAMQVELRDGNSDYAKLQAMTSAIVASAQSQSTL QRVQSPFRAMVPQFDVEIDRVKTQTLHVTTDQVFSALSSYLGASYVNQFNKFGRVFQVYVQADSTARLTPRQIESLMVRN QSGDMIPLGTVATVKPAVGPSLISLYNLYPSATVVGLPAQGYSSGQSLKLMEQIAQQTLPPGAGYEWTAMSYQEKAVSNQ IYLTFGLALLLVYLVLAGQYESWYAPVSVILAVPLSLLGPMAVLLLRSQRRLLQSVGVVSLAQQPVRGRVGHEAADEGQR LVMPERDSHRRHRLLEGLVEHPRARDLPGHRVELVARQGEGIDLASLQQAEDLVIGLIAGDAGVLQMRLGAAHRRRVVHG RDLDARLVEGRKARYRRARLDDVGRIRDLVDRAERHPGLALRILRQERHIPGALVGRIGDLAGVLVHDVVDGHTEPVGHR AAEIDGDAGIAGLGPGRPERAARGADRDRHAQLAGGRDLVLQLGGSAVR >Mature_848_residues AELSKSFPQGIQYDTPFDTTKFVNASIHEVYKTLIEAGVLVLIVILIFLQDWRAMLVPTTTVPVTIIGAFAAMAALGFTI NLSTLFAIVLAIGIVVDDAIVVVEGAAHNIERGMNGHDAAIRAMDQLFAPIVGVTLVLIAVFLPAAFLPGLTGRIYAQFA LVIAATALLSAINAAMLKPTQRALWLRPPVPVEKRNIVYRAFNNLYARLERRYTNLIGRLVRHSTASVVIALILIAAGGY GLSRVPTGFLPIEDQGYLIAAMQLPDGASLERTQKALDRVGTIAKATPGVAQIITIAGISALDNSASLANSGVAYIILTD WESRGQGEDLRSLVYGLNHRLAEVIEARSLVLPPPPIQGIGNAAGFAMQVELRDGNSDYAKLQAMTSAIVASAQSQSTLQ RVQSPFRAMVPQFDVEIDRVKTQTLHVTTDQVFSALSSYLGASYVNQFNKFGRVFQVYVQADSTARLTPRQIESLMVRNQ SGDMIPLGTVATVKPAVGPSLISLYNLYPSATVVGLPAQGYSSGQSLKLMEQIAQQTLPPGAGYEWTAMSYQEKAVSNQI YLTFGLALLLVYLVLAGQYESWYAPVSVILAVPLSLLGPMAVLLLRSQRRLLQSVGVVSLAQQPVRGRVGHEAADEGQRL VMPERDSHRRHRLLEGLVEHPRARDLPGHRVELVARQGEGIDLASLQQAEDLVIGLIAGDAGVLQMRLGAAHRRRVVHGR DLDARLVEGRKARYRRARLDDVGRIRDLVDRAERHPGLALRILRQERHIPGALVGRIGDLAGVLVHDVVDGHTEPVGHRA AEIDGDAGIAGLGPGRPERAARGADRDRHAQLAGGRDLVLQLGGSAVR
Specific function: Involved in resistance to several unrelated toxic compounds, such as dyes, detergents and antibiotics [H]
COG id: COG0841
COG function: function code V; Cation/multidrug efflux pump
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AcrB/AcrD/AcrF (TC 2.A.6) family [H]
Homologues:
Organism=Escherichia coli, GI1786667, Length=630, Percent_Identity=35.8730158730159, Blast_Score=391, Evalue=1e-109, Organism=Escherichia coli, GI1789666, Length=621, Percent_Identity=37.5201288244767, Blast_Score=387, Evalue=1e-108, Organism=Escherichia coli, GI1788814, Length=673, Percent_Identity=34.3239227340267, Blast_Score=382, Evalue=1e-107, Organism=Escherichia coli, GI1789930, Length=610, Percent_Identity=37.2131147540984, Blast_Score=370, Evalue=1e-103, Organism=Escherichia coli, GI1788390, Length=614, Percent_Identity=23.7785016286645, Blast_Score=169, Evalue=7e-43, Organism=Escherichia coli, GI1788391, Length=625, Percent_Identity=26.24, Blast_Score=169, Evalue=9e-43, Organism=Escherichia coli, GI1786788, Length=622, Percent_Identity=20.9003215434084, Blast_Score=109, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001036 - InterPro: IPR004764 [H]
Pfam domain/function: PF00873 ACR_tran [H]
EC number: NA
Molecular weight: Translated: 91672; Mature: 91540
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELSKSFPQGIQYDTPFDTTKFVNASIHEVYKTLIEAGVLVLIVILIFLQDWRAMLVPT CCCCCHHCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECC TTVPVTIIGAFAAMAALGFTINLSTLFAIVLAIGIVVDDAIVVVEGAAHNIERGMNGHDA CCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCEEEEEECCHHHHHCCCCCHHH AIRAMDQLFAPIVGVTLVLIAVFLPAAFLPGLTGRIYAQFALVIAATALLSAINAAMLKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC TQRALWLRPPVPVEKRNIVYRAFNNLYARLERRYTNLIGRLVRHSTASVVIALILIAAGG CHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YGLSRVPTGFLPIEDQGYLIAAMQLPDGASLERTQKALDRVGTIAKATPGVAQIITIAGI CCCCCCCCCCEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SALDNSASLANSGVAYIILTDWESRGQGEDLRSLVYGLNHRLAEVIEARSLVLPPPPIQG HHCCCCHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC IGNAAGFAMQVELRDGNSDYAKLQAMTSAIVASAQSQSTLQRVQSPFRAMVPQFDVEIDR CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VKTQTLHVTTDQVFSALSSYLGASYVNQFNKFGRVFQVYVQADSTARLTPRQIESLMVRN EEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHCC QSGDMIPLGTVATVKPAVGPSLISLYNLYPSATVVGLPAQGYSSGQSLKLMEQIAQQTLP CCCCEEECCCHHCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCC PGAGYEWTAMSYQEKAVSNQIYLTFGLALLLVYLVLAGQYESWYAPVSVILAVPLSLLGP CCCCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH MAVLLLRSQRRLLQSVGVVSLAQQPVRGRVGHEAADEGQRLVMPERDSHRRHRLLEGLVE HHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHCCCCEEECCCCCCHHHHHHHHHHHC HPRARDLPGHRVELVARQGEGIDLASLQQAEDLVIGLIAGDAGVLQMRLGAAHRRRVVHG CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHCCC RDLDARLVEGRKARYRRARLDDVGRIRDLVDRAERHPGLALRILRQERHIPGALVGRIGD CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH LAGVLVHDVVDGHTEPVGHRAAEIDGDAGIAGLGPGRPERAARGADRDRHAQLAGGRDLV HHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHCCCCEEE LQLGGSAVR EECCCCCCC >Mature Secondary Structure AELSKSFPQGIQYDTPFDTTKFVNASIHEVYKTLIEAGVLVLIVILIFLQDWRAMLVPT CCCCHHCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECC TTVPVTIIGAFAAMAALGFTINLSTLFAIVLAIGIVVDDAIVVVEGAAHNIERGMNGHDA CCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCEEEEEECCHHHHHCCCCCHHH AIRAMDQLFAPIVGVTLVLIAVFLPAAFLPGLTGRIYAQFALVIAATALLSAINAAMLKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC TQRALWLRPPVPVEKRNIVYRAFNNLYARLERRYTNLIGRLVRHSTASVVIALILIAAGG CHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YGLSRVPTGFLPIEDQGYLIAAMQLPDGASLERTQKALDRVGTIAKATPGVAQIITIAGI CCCCCCCCCCEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SALDNSASLANSGVAYIILTDWESRGQGEDLRSLVYGLNHRLAEVIEARSLVLPPPPIQG HHCCCCHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC IGNAAGFAMQVELRDGNSDYAKLQAMTSAIVASAQSQSTLQRVQSPFRAMVPQFDVEIDR CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VKTQTLHVTTDQVFSALSSYLGASYVNQFNKFGRVFQVYVQADSTARLTPRQIESLMVRN EEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHCC QSGDMIPLGTVATVKPAVGPSLISLYNLYPSATVVGLPAQGYSSGQSLKLMEQIAQQTLP CCCCEEECCCHHCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCC PGAGYEWTAMSYQEKAVSNQIYLTFGLALLLVYLVLAGQYESWYAPVSVILAVPLSLLGP CCCCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH MAVLLLRSQRRLLQSVGVVSLAQQPVRGRVGHEAADEGQRLVMPERDSHRRHRLLEGLVE HHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHCCCCEEECCCCCCHHHHHHHHHHHC HPRARDLPGHRVELVARQGEGIDLASLQQAEDLVIGLIAGDAGVLQMRLGAAHRRRVVHG CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHCCC RDLDARLVEGRKARYRRARLDDVGRIRDLVDRAERHPGLALRILRQERHIPGALVGRIGD CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH LAGVLVHDVVDGHTEPVGHRAAEIDGDAGIAGLGPGRPERAARGADRDRHAQLAGGRDLV HHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHCCCCEEE LQLGGSAVR EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12271122 [H]