| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342609
Identifier: 146342609
GI number: 146342609
Start: 5975768
End: 5976562
Strand: Direct
Name: 146342609
Synonym: BRADO5773
Alternate gene names: NA
Gene position: 5975768-5976562 (Clockwise)
Preceding gene: 146342608
Following gene: 146342613
Centisome position: 80.14
GC content: 63.9
Gene sequence:
>795_bases ATGACCTTGTCGACCCGCCTGCGCACTTTCGGACTGGCCGTCTCTGCGGTGTTGATCCTGACCGATGCGGCGCCGGCCGC CGAGATTCACGTGATGATTTCGGGCGGCTTGACGGCGCCCTTCACGGCTCTCGCACCGGAGTTCGAGCGGCGCACCGGTC ACAAGATCGACATCGCGAGGGGCCCATCGATGGGAACCACCACGAACGCCATCCCTGTGCGCCTGGAGCGCGGCGAGCCG GCGGATGTGCTGATCATGGTGGGCTATGCGCTCAGCGATCTCACCACGAAGGGCAAGGTGACGCCTGACAGCCGCGTCGA TCTTGCCAACTCGCCGATCGCGATCGCCGTGAAATCTGGCACGCCCCACCCCGATATTTCCAACGCCGATGCCGTGAAGC GGATGCTGATCGCCGCCAAATCGATCGCCTATTCCGACAGCGCCAGCGGCGTCTATGTCTCGACGGAGATGTTCGACAAG CTCGGCATCAAGGAGCAGATGAAGGACAAGGCGCGCATGATCCCGGCCACTCCTGTCGGCGAGATCGTCGCCAAGGGCGA AGCCGAGATCGGATTTCAGCAGCTCAGCGAGCTCAAGCCGGTGCACGGCATCGACATCGTCGGGCCGCTGCCGGCGGGCC TGCAGAAGATCACAGTCTTCTCGGCAGGTATCACCACCAGCGCCAGGGAGCCGGAGGCAGGCAAGGCGCTCATCAAGTTC CTGACGTCGCCTGATGCCCGCAAGGTGATCGAGGAGAGCGGCCTGGAGCCGATCGTGCACAAATCGCCGAACTGA
Upstream 100 bases:
>100_bases GCGCCGGCCCGGCGCTGGTCTTCCCGCCTCAGCCGGGCTATCCAAGGCGCCCCGCATCCGGCCCTCAGCCGTTTGCCTTC GTTCGCCTTGGAGCTTGTCC
Downstream 100 bases:
>100_bases TCGATGCGAACCGGACCATTCGAGCTCCCCGCACCCGAAGCTGCGGGGAGATGAAGCGGGACGCTTACGACGGCGAGGAC GGGACTACTGGGTGAGCAGC
Product: putative ABC transporter periplasmic substrate-binding protein
Products: NA
Alternate protein names: ABC Transporter Periplasmic Molybdate; ABC Transporter; PROX Protein
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTLSTRLRTFGLAVSAVLILTDAAPAAEIHVMISGGLTAPFTALAPEFERRTGHKIDIARGPSMGTTTNAIPVRLERGEP ADVLIMVGYALSDLTTKGKVTPDSRVDLANSPIAIAVKSGTPHPDISNADAVKRMLIAAKSIAYSDSASGVYVSTEMFDK LGIKEQMKDKARMIPATPVGEIVAKGEAEIGFQQLSELKPVHGIDIVGPLPAGLQKITVFSAGITTSAREPEAGKALIKF LTSPDARKVIEESGLEPIVHKSPN
Sequences:
>Translated_264_residues MTLSTRLRTFGLAVSAVLILTDAAPAAEIHVMISGGLTAPFTALAPEFERRTGHKIDIARGPSMGTTTNAIPVRLERGEP ADVLIMVGYALSDLTTKGKVTPDSRVDLANSPIAIAVKSGTPHPDISNADAVKRMLIAAKSIAYSDSASGVYVSTEMFDK LGIKEQMKDKARMIPATPVGEIVAKGEAEIGFQQLSELKPVHGIDIVGPLPAGLQKITVFSAGITTSAREPEAGKALIKF LTSPDARKVIEESGLEPIVHKSPN >Mature_263_residues TLSTRLRTFGLAVSAVLILTDAAPAAEIHVMISGGLTAPFTALAPEFERRTGHKIDIARGPSMGTTTNAIPVRLERGEPA DVLIMVGYALSDLTTKGKVTPDSRVDLANSPIAIAVKSGTPHPDISNADAVKRMLIAAKSIAYSDSASGVYVSTEMFDKL GIKEQMKDKARMIPATPVGEIVAKGEAEIGFQQLSELKPVHGIDIVGPLPAGLQKITVFSAGITTSAREPEAGKALIKFL TSPDARKVIEESGLEPIVHKSPN
Specific function: Unknown
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27802; Mature: 27670
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSTRLRTFGLAVSAVLILTDAAPAAEIHVMISGGLTAPFTALAPEFERRTGHKIDIAR CCCHHHHHHHHHHHHEEEEEECCCCCEEEEEEEECCCCCCHHHHCCHHHHHCCCEEEEEC GPSMGTTTNAIPVRLERGEPADVLIMVGYALSDLTTKGKVTPDSRVDLANSPIAIAVKSG CCCCCCCCCCEEEEEECCCCCCEEEEECHHHHHHCCCCCCCCCCCCEECCCCEEEEECCC TPHPDISNADAVKRMLIAAKSIAYSDSASGVYVSTEMFDKLGIKEQMKDKARMIPATPVG CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHCCCHHHHHHHHHCCCCCCHH EIVAKGEAEIGFQQLSELKPVHGIDIVGPLPAGLQKITVFSAGITTSAREPEAGKALIKF HHHCCCCHHHCHHHHHHCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH LTSPDARKVIEESGLEPIVHKSPN HCCCHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TLSTRLRTFGLAVSAVLILTDAAPAAEIHVMISGGLTAPFTALAPEFERRTGHKIDIAR CCHHHHHHHHHHHHEEEEEECCCCCEEEEEEEECCCCCCHHHHCCHHHHHCCCEEEEEC GPSMGTTTNAIPVRLERGEPADVLIMVGYALSDLTTKGKVTPDSRVDLANSPIAIAVKSG CCCCCCCCCCEEEEEECCCCCCEEEEECHHHHHHCCCCCCCCCCCCEECCCCEEEEECCC TPHPDISNADAVKRMLIAAKSIAYSDSASGVYVSTEMFDKLGIKEQMKDKARMIPATPVG CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHCCCHHHHHHHHHCCCCCCHH EIVAKGEAEIGFQQLSELKPVHGIDIVGPLPAGLQKITVFSAGITTSAREPEAGKALIKF HHHCCCCHHHCHHHHHHCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH LTSPDARKVIEESGLEPIVHKSPN HCCCHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA