Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146342596

Identifier: 146342596

GI number: 146342596

Start: 5961993

End: 5963141

Strand: Direct

Name: 146342596

Synonym: BRADO5759

Alternate gene names: NA

Gene position: 5961993-5963141 (Clockwise)

Preceding gene: 146342593

Following gene: 146342602

Centisome position: 79.96

GC content: 65.71

Gene sequence:

>1149_bases
ATGATGAGAGCTGCGCTCACTGTGCTCGGCCTGGGCTTGACGATGGCGCTCGGCACGCCGGCGCAGGCCGACATCAAGGT
CGGTATCGTGGTGTCCGCGACCGGCCCCGGCTCGGCGCTCGGACAGCCGCAGATCAAGGCGGTCGCTGCGCTGCCGAAGG
AGATCGGCGGCGAGAAGATCGTCTACATCGCGCTCGACGACGAATCCGACAGCGTCAAGGGCCTGCAGAACGCGCGCCGG
CTGGTGATCCAGGACGGCGTCGACGTCATCATCGGCTCGTCGCTGACGCCGGTCACGATGCCGATGCTCGACGTCGCGCT
GGAGAGCCGGACGCCGTTATTGTCGCTCGCGGCCTCGACCGCGATCGTGCAGCCGATGGACGACAAGCGGAAATGGGCGT
TCAAGGTCGTGCCCAACGACGACCTCATGGCCGCGGCGATGCTGAAATACATCGCCAGGAGCGGCGTCAAGACATTGGGC
TTCATCGGGGTCTCCGACGGCTACGGCGAGGGCTACTATCAGGAGGTGACGAAGCTGGCGCCGAAGCTCGGCATCACCGT
CACGACCCATGAGGTGTATGCGCGCGGTGACACCAGCGCGAGCGGTCAGGCGCTGAAGGTGATCGCGACCAATCCGGACG
CGGTGTTCATCGCCTCAGCCGGCACGCCGGCGGTGCTGCCGCAGCAGGCGCTACGCGAGCGCGGCTATCAGGGTAAGATC
TTCCAGACCCATGGCGTGGCGACACAGGAGTTCATCAAGCTCGGCAAGGACAGCGTCGAGGGCGCGATCTTCGCCGGCGA
GGCGTTCTCGATCGCCGACGATCTCGCGCCCGAGGATCCGTTCCGCCGCGCCAACGACGCCTTCGTGTCGGCCTATCAGG
CCGCCAACGGCGACAGGCCGAACATCTTCGCCGCACATCTCTGGGACACGGTGACGCTGTTGAAAGGCGCCATCCCCGGC
GCGCTGAAGGCCGCCAAGCCGGGCACGCCCGAGTTCCGCGCCGCATTGCGCGACGAGCTTGAGCGCGGCAAGGACGTCTA
TCTCAACAACGGCCTCTCCACCATGAGCCCGACTGATCATAACGGCTATGATGAGCGCTCGGCGTTTCTGATCAAGGTCG
AGGGCGGGAAATTCAGGCTGGTGAAGTAG

Upstream 100 bases:

>100_bases
CCATGGGGACAGACGCGCCGCGGCGGCAGGGCTAGGCTTCGCGGCTCGAAGTCCCGGCCGATCAACGCGCCGGGCACGCC
ACGCCCAACAGGGAGAAACC

Downstream 100 bases:

>100_bases
GCAAGCTCGTGATCGAAAGCATAGTCTGCCGCGCAGGCGGTGCACTCCCCTCCCCCCTGCGGGGAGGGGTCGGGGGGGGG
TCCACGAGTCCGACTATCAA

Product: putative amino-acid ABC transporter periplasmic substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MMRAALTVLGLGLTMALGTPAQADIKVGIVVSATGPGSALGQPQIKAVAALPKEIGGEKIVYIALDDESDSVKGLQNARR
LVIQDGVDVIIGSSLTPVTMPMLDVALESRTPLLSLAASTAIVQPMDDKRKWAFKVVPNDDLMAAAMLKYIARSGVKTLG
FIGVSDGYGEGYYQEVTKLAPKLGITVTTHEVYARGDTSASGQALKVIATNPDAVFIASAGTPAVLPQQALRERGYQGKI
FQTHGVATQEFIKLGKDSVEGAIFAGEAFSIADDLAPEDPFRRANDAFVSAYQAANGDRPNIFAAHLWDTVTLLKGAIPG
ALKAAKPGTPEFRAALRDELERGKDVYLNNGLSTMSPTDHNGYDERSAFLIKVEGGKFRLVK

Sequences:

>Translated_382_residues
MMRAALTVLGLGLTMALGTPAQADIKVGIVVSATGPGSALGQPQIKAVAALPKEIGGEKIVYIALDDESDSVKGLQNARR
LVIQDGVDVIIGSSLTPVTMPMLDVALESRTPLLSLAASTAIVQPMDDKRKWAFKVVPNDDLMAAAMLKYIARSGVKTLG
FIGVSDGYGEGYYQEVTKLAPKLGITVTTHEVYARGDTSASGQALKVIATNPDAVFIASAGTPAVLPQQALRERGYQGKI
FQTHGVATQEFIKLGKDSVEGAIFAGEAFSIADDLAPEDPFRRANDAFVSAYQAANGDRPNIFAAHLWDTVTLLKGAIPG
ALKAAKPGTPEFRAALRDELERGKDVYLNNGLSTMSPTDHNGYDERSAFLIKVEGGKFRLVK
>Mature_382_residues
MMRAALTVLGLGLTMALGTPAQADIKVGIVVSATGPGSALGQPQIKAVAALPKEIGGEKIVYIALDDESDSVKGLQNARR
LVIQDGVDVIIGSSLTPVTMPMLDVALESRTPLLSLAASTAIVQPMDDKRKWAFKVVPNDDLMAAAMLKYIARSGVKTLG
FIGVSDGYGEGYYQEVTKLAPKLGITVTTHEVYARGDTSASGQALKVIATNPDAVFIASAGTPAVLPQQALRERGYQGKI
FQTHGVATQEFIKLGKDSVEGAIFAGEAFSIADDLAPEDPFRRANDAFVSAYQAANGDRPNIFAAHLWDTVTLLKGAIPG
ALKAAKPGTPEFRAALRDELERGKDVYLNNGLSTMSPTDHNGYDERSAFLIKVEGGKFRLVK

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 40444; Mature: 40444

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRAALTVLGLGLTMALGTPAQADIKVGIVVSATGPGSALGQPQIKAVAALPKEIGGEKI
CCHHHHHHHHHHHHEECCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEE
VYIALDDESDSVKGLQNARRLVIQDGVDVIIGSSLTPVTMPMLDVALESRTPLLSLAAST
EEEEECCCCCHHHHHHHHHEEEEECCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHH
AIVQPMDDKRKWAFKVVPNDDLMAAAMLKYIARSGVKTLGFIGVSDGYGEGYYQEVTKLA
HEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHH
PKLGITVTTHEVYARGDTSASGQALKVIATNPDAVFIASAGTPAVLPQQALRERGYQGKI
HHCCEEEEEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHHHCCCCCCE
FQTHGVATQEFIKLGKDSVEGAIFAGEAFSIADDLAPEDPFRRANDAFVSAYQAANGDRP
EEECCCCHHHHHHCCCCCCCCEEEECCCHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCCC
NIFAAHLWDTVTLLKGAIPGALKAAKPGTPEFRAALRDELERGKDVYLNNGLSTMSPTDH
CEEHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
NGYDERSAFLIKVEGGKFRLVK
CCCCCCCEEEEEECCCEEEEEC
>Mature Secondary Structure
MMRAALTVLGLGLTMALGTPAQADIKVGIVVSATGPGSALGQPQIKAVAALPKEIGGEKI
CCHHHHHHHHHHHHEECCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEE
VYIALDDESDSVKGLQNARRLVIQDGVDVIIGSSLTPVTMPMLDVALESRTPLLSLAAST
EEEEECCCCCHHHHHHHHHEEEEECCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHH
AIVQPMDDKRKWAFKVVPNDDLMAAAMLKYIARSGVKTLGFIGVSDGYGEGYYQEVTKLA
HEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHH
PKLGITVTTHEVYARGDTSASGQALKVIATNPDAVFIASAGTPAVLPQQALRERGYQGKI
HHCCEEEEEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHHHCCCCCCE
FQTHGVATQEFIKLGKDSVEGAIFAGEAFSIADDLAPEDPFRRANDAFVSAYQAANGDRP
EEECCCCHHHHHHCCCCCCCCEEEECCCHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCCC
NIFAAHLWDTVTLLKGAIPGALKAAKPGTPEFRAALRDELERGKDVYLNNGLSTMSPTDH
CEEHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
NGYDERSAFLIKVEGGKFRLVK
CCCCCCCEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]