| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is thiE [H]
Identifier: 146342550
GI number: 146342550
Start: 5914466
End: 5915074
Strand: Direct
Name: thiE [H]
Synonym: BRADO5712
Alternate gene names: 146342550
Gene position: 5914466-5915074 (Clockwise)
Preceding gene: 146342549
Following gene: 146342551
Centisome position: 79.32
GC content: 67.65
Gene sequence:
>609_bases ATGCCGTATCCTGATCGCTTCTATCCCGTCGTCGACAGCCTCGCCTGGGTCGAGCGTCTCACCCGTCTCGGCGTCGGCAC CGTGCAATTGCGCGCGAAGAATCTCGACGACGCCGCGGCGCTGCAGATCGTCACCGACGCGCTGGCCATCACCCGGGGCA CCGCGACCAAGCTGATCGTCAACGACTACTGGCGCGCCGCGATCGCCGCCGGCGCCGCGCATGTCCATCTCGGCCAGGAG GATCTGGCGGAGGCTGACGTCAAGGCGATCAAGGACGCCGGCCTGACGCTCGGCCTGTCGACGCATGACGATGCCGAACT GGAGACTGCGCTCGCGGCGAAGCCCGACTACGTCGCGTTGGGGCCGATCTTCCCGACCACGCTCAAGGCGATGCGCTTCG CGCCGCAGGGCATCCCGAAGATCAGCGTGTGGAAGCAGCGCGTCGGCAGCATTCCGCTGGTCGCCATCGGCGGCATCAAA CTGGAGCAGGCCGCGGAGATTTTTGCCGCCGGCGCTGATTCCATCGCGGTTGTCTCCGACGTCACCCAGAACGCAGATCC CGACGCCCGCGTCCGCGCCTGGCTCGACGCGACCAAGGAGCCGGCATGA
Upstream 100 bases:
>100_bases CTCGGAGTCGAAGCCGGCCGCACCGCCTACGAGGCCGGTCTGATGGACGCCCGCGATTTCGCCTCGCCCTCCACCCCTGT CGTTGGGACTCCGTTCTGGC
Downstream 100 bases:
>100_bases TGCCCCACTCGCTCCACCGTCATTGCGAGCGAAGCGAAGCAATCCAGGGCCGCGCGTGCCGCCCTGGATTGCTTCGTCGC TACGCTCCTCGCAATGACGC
Product: thiamine phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MPYPDRFYPVVDSLAWVERLTRLGVGTVQLRAKNLDDAAALQIVTDALAITRGTATKLIVNDYWRAAIAAGAAHVHLGQE DLAEADVKAIKDAGLTLGLSTHDDAELETALAAKPDYVALGPIFPTTLKAMRFAPQGIPKISVWKQRVGSIPLVAIGGIK LEQAAEIFAAGADSIAVVSDVTQNADPDARVRAWLDATKEPA
Sequences:
>Translated_202_residues MPYPDRFYPVVDSLAWVERLTRLGVGTVQLRAKNLDDAAALQIVTDALAITRGTATKLIVNDYWRAAIAAGAAHVHLGQE DLAEADVKAIKDAGLTLGLSTHDDAELETALAAKPDYVALGPIFPTTLKAMRFAPQGIPKISVWKQRVGSIPLVAIGGIK LEQAAEIFAAGADSIAVVSDVTQNADPDARVRAWLDATKEPA >Mature_201_residues PYPDRFYPVVDSLAWVERLTRLGVGTVQLRAKNLDDAAALQIVTDALAITRGTATKLIVNDYWRAAIAAGAAHVHLGQED LAEADVKAIKDAGLTLGLSTHDDAELETALAAKPDYVALGPIFPTTLKAMRFAPQGIPKISVWKQRVGSIPLVAIGGIKL EQAAEIFAAGADSIAVVSDVTQNADPDARVRAWLDATKEPA
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=186, Percent_Identity=50.5376344086022, Blast_Score=178, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6325042, Length=214, Percent_Identity=28.5046728971963, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 21447; Mature: 21316
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYPDRFYPVVDSLAWVERLTRLGVGTVQLRAKNLDDAAALQIVTDALAITRGTATKLIV CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHH NDYWRAAIAAGAAHVHLGQEDLAEADVKAIKDAGLTLGLSTHDDAELETALAAKPDYVAL HHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCEEEE GPIFPTTLKAMRFAPQGIPKISVWKQRVGSIPLVAIGGIKLEQAAEIFAAGADSIAVVSD CCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCEEHHHHHHHHHCCCCCCHHHHH VTQNADPDARVRAWLDATKEPA HHCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure PYPDRFYPVVDSLAWVERLTRLGVGTVQLRAKNLDDAAALQIVTDALAITRGTATKLIV CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHH NDYWRAAIAAGAAHVHLGQEDLAEADVKAIKDAGLTLGLSTHDDAELETALAAKPDYVAL HHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCEEEE GPIFPTTLKAMRFAPQGIPKISVWKQRVGSIPLVAIGGIKLEQAAEIFAAGADSIAVVSD CCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCEEHHHHHHHHHCCCCCCHHHHH VTQNADPDARVRAWLDATKEPA HHCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371431 [H]