| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is murB
Identifier: 146342496
GI number: 146342496
Start: 5849978
End: 5850901
Strand: Reverse
Name: murB
Synonym: BRADO5657
Alternate gene names: 146342496
Gene position: 5850901-5849978 (Counterclockwise)
Preceding gene: 146342497
Following gene: 146342495
Centisome position: 78.47
GC content: 67.86
Gene sequence:
>924_bases GTGAGCTTTCCCGACATCACGCCCGATCTGAAGGCCGCGATGCCCGCGCTGCGCGGACGTCTGCTCGCCAATGAAAGCCT CGCGCCGCTCACCTGGTTTCGCGTCGGCGGTCCGGCGCAGGTGCTGTTCACGCCGGCCGATGCGGACGACCTCGCCTACT TCCTGAAGCACCTGCCGGCCGAGCTACCCGTGTACGTCATCGGCGTCGGCTCCAACATGATCGTGCGCGACGGCGGCGTG CCGGGCGTAGTGATCCGGCTGGCGCCGCGCGCGTTCGGCGAGGTCAAGGCCGAAGGAGACATCATCACGGCTGGCACGGC AGCGCGCGACAAGCGCGTCGCGGAGGTCGCGGCGTCAGCCGATCTCGCCGGTCTGGAATTCCTGTTCGGCATTCCCGGCA CCATCGGCGGTGCGCTGCGCATGAATGCCGGCGCCAATGGTGGCGAGACCAAGGACATCCTGGTTGAGGCGACCGCGATC GATCGCCGGGGCGAGACGCATCGCTTAAGCAATGCCGACATGAAGTTCACCTATCGCGCGAGCGGCACGGACGCGGCGCT GATCTTCACGGCCGTACGCTTCCGTGGCACCCCGTCCGAACCAGCGGCGATCCGCGCGCGCATGGCCGAGGTGCAGGCGC ATCGCGAGACGGCGCAGCCGATCCGCGAGAAGACCGGCGGCTCGACCTTCAAGAACCCGCCGGGCCATTCGGCCTGGAAG CTCGTCGATGCCGCCGGCTGCCGCGGCCTCAAGGTCGGGGGCGCGCAGGTCTCGGAGATGCACTGTAACTTCCTGATCAA CACAGGCAATGCCACCGCCGACGATATCGAGACGCTCGGCGAGACCGTGCGCGAACGGGTCAAGGCCAGCTCGGGCATCG AGCTGCAGTGGGAGATCAAGCGGATCGGAGTCAAGGCGAGCTGA
Upstream 100 bases:
>100_bases CTCGCCAAGCCGGGCGACCTCGTCGTCTGCCTCGGCGCCGGCAACATCACGCAATGGGCCTACGCGCTGCCGAACGAGTT GAAGGCGCTGGGGTAGGGCG
Downstream 100 bases:
>100_bases CGACCCGCTTCTTCACGTGACGTCCACGCTGTCGCAACCGCATTCTGAGATCAATCGAGAAACCATTGATGCGCACCACG ATTCTGTTCGGCGGCTCCAA
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSFPDITPDLKAAMPALRGRLLANESLAPLTWFRVGGPAQVLFTPADADDLAYFLKHLPAELPVYVIGVGSNMIVRDGGV PGVVIRLAPRAFGEVKAEGDIITAGTAARDKRVAEVAASADLAGLEFLFGIPGTIGGALRMNAGANGGETKDILVEATAI DRRGETHRLSNADMKFTYRASGTDAALIFTAVRFRGTPSEPAAIRARMAEVQAHRETAQPIREKTGGSTFKNPPGHSAWK LVDAAGCRGLKVGGAQVSEMHCNFLINTGNATADDIETLGETVRERVKASSGIELQWEIKRIGVKAS
Sequences:
>Translated_307_residues MSFPDITPDLKAAMPALRGRLLANESLAPLTWFRVGGPAQVLFTPADADDLAYFLKHLPAELPVYVIGVGSNMIVRDGGV PGVVIRLAPRAFGEVKAEGDIITAGTAARDKRVAEVAASADLAGLEFLFGIPGTIGGALRMNAGANGGETKDILVEATAI DRRGETHRLSNADMKFTYRASGTDAALIFTAVRFRGTPSEPAAIRARMAEVQAHRETAQPIREKTGGSTFKNPPGHSAWK LVDAAGCRGLKVGGAQVSEMHCNFLINTGNATADDIETLGETVRERVKASSGIELQWEIKRIGVKAS >Mature_306_residues SFPDITPDLKAAMPALRGRLLANESLAPLTWFRVGGPAQVLFTPADADDLAYFLKHLPAELPVYVIGVGSNMIVRDGGVP GVVIRLAPRAFGEVKAEGDIITAGTAARDKRVAEVAASADLAGLEFLFGIPGTIGGALRMNAGANGGETKDILVEATAID RRGETHRLSNADMKFTYRASGTDAALIFTAVRFRGTPSEPAAIRARMAEVQAHRETAQPIREKTGGSTFKNPPGHSAWKL VDAAGCRGLKVGGAQVSEMHCNFLINTGNATADDIETLGETVRERVKASSGIELQWEIKRIGVKAS
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_BRASO (A4YZK1)
Other databases:
- EMBL: CU234118 - RefSeq: YP_001207544.1 - ProteinModelPortal: A4YZK1 - SMR: A4YZK1 - STRING: A4YZK1 - GeneID: 5119955 - GenomeReviews: CU234118_GR - KEGG: bra:BRADO5657 - eggNOG: COG0812 - HOGENOM: HBG686573 - OMA: SKKHAGF - ProtClustDB: PRK13905 - BioCyc: BSP376:BRADO5657-MONOMER - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.30.43.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 32487; Mature: 32356
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: PS51387 FAD_PCMH
Important sites: ACT_SITE 179-179 ACT_SITE 228-228 ACT_SITE 298-298
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPDITPDLKAAMPALRGRLLANESLAPLTWFRVGGPAQVLFTPADADDLAYFLKHLPA CCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHCCC ELPVYVIGVGSNMIVRDGGVPGVVIRLAPRAFGEVKAEGDIITAGTAARDKRVAEVAASA CCCEEEEEECCCEEEECCCCCEEEEEECCHHHCCEECCCCEEECCCCHHHHHHHHHHHHC DLAGLEFLFGIPGTIGGALRMNAGANGGETKDILVEATAIDRRGETHRLSNADMKFTYRA CHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEC SGTDAALIFTAVRFRGTPSEPAAIRARMAEVQAHRETAQPIREKTGGSTFKNPPGHSAWK CCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE LVDAAGCRGLKVGGAQVSEMHCNFLINTGNATADDIETLGETVRERVKASSGIELQWEIK EEHHCCCCEEEECCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEE RIGVKAS ECCCCCC >Mature Secondary Structure SFPDITPDLKAAMPALRGRLLANESLAPLTWFRVGGPAQVLFTPADADDLAYFLKHLPA CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHCCC ELPVYVIGVGSNMIVRDGGVPGVVIRLAPRAFGEVKAEGDIITAGTAARDKRVAEVAASA CCCEEEEEECCCEEEECCCCCEEEEEECCHHHCCEECCCCEEECCCCHHHHHHHHHHHHC DLAGLEFLFGIPGTIGGALRMNAGANGGETKDILVEATAIDRRGETHRLSNADMKFTYRA CHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEC SGTDAALIFTAVRFRGTPSEPAAIRARMAEVQAHRETAQPIREKTGGSTFKNPPGHSAWK CCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE LVDAAGCRGLKVGGAQVSEMHCNFLINTGNATADDIETLGETVRERVKASSGIELQWEIK EEHHCCCCEEEECCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEE RIGVKAS ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA