| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is bcr [H]
Identifier: 146342487
GI number: 146342487
Start: 5836032
End: 5837315
Strand: Direct
Name: bcr [H]
Synonym: BRADO5648
Alternate gene names: 146342487
Gene position: 5836032-5837315 (Clockwise)
Preceding gene: 146342486
Following gene: 146342507
Centisome position: 78.27
GC content: 67.13
Gene sequence:
>1284_bases ATGCATGGAATGATCAGCAGACCGCCGGGAGCCGTCGCACAGCGCGCGGCTCCGTCGCGCACGCTGCTGGTGCTGCTCGT CGTCATGACCGGACTGGCGCCGATCTCGCTGTACCTGCTGGTGCCGGCGCTGCCGTTGCTCGCGACCACCTTCGGGCGCG ACGCCTCGGTGGTGCAGATGACGGTGTCGTTCTACATGATCGGCATTGCCATCTCGCAGCTGTTGCTGGGCCCGCTGTCC GATCGCTTCGGCCGCCGTCCGGTGATGCTCGCCGGCCTTGCGCTCTCCATCATCGCGAGCTTTGGCTGCATCTTGGCCGA CACCCTGCCGCAGCTGATCGCGGCGCGCTTCTTTCAGGCGCTCGGCGGCGCCAGCGGCATGGTGATCAGCAGGGCGATCA TCCGCGACCTCTATCCGCGCGAGCGCATTGGCGCGATGATCAGCCTCGTCGTCGCCGTCATGATGATCGCGCAGATGCTG TCGCCGCTGACCGGCGGCCTGATCGAGATCGCGTTCGGCTGGCATGCCATCTTCTACGTGGTGGCAGCGGTGTCGATTGC CGTCGGCATCGCTGTAACGCTGGCGCTGCCGGAAACCCGCCCAGCCCGCGTCGAGGGCGCCAGCTTCCGCCGCGACGTGG TCATACTCGTCAAGAGCCGCGCCTTTCTGGGCTACATGCTGTGCCAGGTGCTGGCGTCGCAGATCATCTTCGCCTTTGCC GGCGGCGGCCCCTACATCGTCGAGGTGCAGATGGCCCGCTCGTCGGCAGAGTATGGCGCCTGGTTCGCGACGACAGGCTT TGCCTATTTCGTCGGGAATCTGTTCTGCGTCCGCTACGCGCCGCGGCACGCGCTCGACCGGCTGATCTGGTTCGGCCTGA CCTTGCAGCTGACCAGCGCCGCGCTGAATTTCACCTGGGGCATCTTCGGTCTCAACCAGATGCCGTCGGTGCTGTTCGGC ACGCAGATGCTGCTGATGTTCGCCAACGCCTTCGTGATGGCAAACTCCGCCGCCGGCGCCATCAGCGTGCGGCCGGGCGC CGCCGGCACCGCCTCGGGCGCGATGGGCTTTCTGCAGATGGGGCTGGGCGCGCTGACCTCGCAGCTCGGGGCGTATCTCG GCGGTCACTATGCGACCACGCTGCCCCTGACGTCGGCGATGCTGACGCTGTCGCTGGCCTGCGCCGGCTGCATGATCTTC CTCGTTCCCCGCACGCCGGTCACGGTGACGGTGACCAAGGAGCTGATCGAAGCGGCGGAGGAGGACGAGGGCGGGGTGAT GTGA
Upstream 100 bases:
>100_bases GCCATGGTCCCGCTGCCGGTATGGGCGCATGCAGAAACAGGCGTTTCCGTGACGCGGAAGGCCGCTACAGTCGCGGCGTC CACCTGATTTGAGCGGCACG
Downstream 100 bases:
>100_bases GGGATCGCGCGCTTTCGCATGTCTCTCGGTGTCATACCCGCGAAGGCGGGTATCCAGTACGCCGCGGCGGCGCGGCTCCA TCACAACCGCCTCTGGAATA
Product: Bcr/CflA family drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Sulfonamide resistance protein [H]
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MHGMISRPPGAVAQRAAPSRTLLVLLVVMTGLAPISLYLLVPALPLLATTFGRDASVVQMTVSFYMIGIAISQLLLGPLS DRFGRRPVMLAGLALSIIASFGCILADTLPQLIAARFFQALGGASGMVISRAIIRDLYPRERIGAMISLVVAVMMIAQML SPLTGGLIEIAFGWHAIFYVVAAVSIAVGIAVTLALPETRPARVEGASFRRDVVILVKSRAFLGYMLCQVLASQIIFAFA GGGPYIVEVQMARSSAEYGAWFATTGFAYFVGNLFCVRYAPRHALDRLIWFGLTLQLTSAALNFTWGIFGLNQMPSVLFG TQMLLMFANAFVMANSAAGAISVRPGAAGTASGAMGFLQMGLGALTSQLGAYLGGHYATTLPLTSAMLTLSLACAGCMIF LVPRTPVTVTVTKELIEAAEEDEGGVM
Sequences:
>Translated_427_residues MHGMISRPPGAVAQRAAPSRTLLVLLVVMTGLAPISLYLLVPALPLLATTFGRDASVVQMTVSFYMIGIAISQLLLGPLS DRFGRRPVMLAGLALSIIASFGCILADTLPQLIAARFFQALGGASGMVISRAIIRDLYPRERIGAMISLVVAVMMIAQML SPLTGGLIEIAFGWHAIFYVVAAVSIAVGIAVTLALPETRPARVEGASFRRDVVILVKSRAFLGYMLCQVLASQIIFAFA GGGPYIVEVQMARSSAEYGAWFATTGFAYFVGNLFCVRYAPRHALDRLIWFGLTLQLTSAALNFTWGIFGLNQMPSVLFG TQMLLMFANAFVMANSAAGAISVRPGAAGTASGAMGFLQMGLGALTSQLGAYLGGHYATTLPLTSAMLTLSLACAGCMIF LVPRTPVTVTVTKELIEAAEEDEGGVM >Mature_427_residues MHGMISRPPGAVAQRAAPSRTLLVLLVVMTGLAPISLYLLVPALPLLATTFGRDASVVQMTVSFYMIGIAISQLLLGPLS DRFGRRPVMLAGLALSIIASFGCILADTLPQLIAARFFQALGGASGMVISRAIIRDLYPRERIGAMISLVVAVMMIAQML SPLTGGLIEIAFGWHAIFYVVAAVSIAVGIAVTLALPETRPARVEGASFRRDVVILVKSRAFLGYMLCQVLASQIIFAFA GGGPYIVEVQMARSSAEYGAWFATTGFAYFVGNLFCVRYAPRHALDRLIWFGLTLQLTSAALNFTWGIFGLNQMPSVLFG TQMLLMFANAFVMANSAAGAISVRPGAAGTASGAMGFLQMGLGALTSQLGAYLGGHYATTLPLTSAMLTLSLACAGCMIF LVPRTPVTVTVTKELIEAAEEDEGGVM
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=366, Percent_Identity=31.6939890710383, Blast_Score=152, Evalue=5e-38, Organism=Escherichia coli, GI48994889, Length=380, Percent_Identity=27.8947368421053, Blast_Score=125, Evalue=6e-30, Organism=Escherichia coli, GI1790146, Length=347, Percent_Identity=32.2766570605187, Blast_Score=118, Evalue=7e-28, Organism=Escherichia coli, GI87082312, Length=328, Percent_Identity=28.0487804878049, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1787065, Length=313, Percent_Identity=28.4345047923323, Blast_Score=86, Evalue=7e-18, Organism=Escherichia coli, GI1790195, Length=153, Percent_Identity=30.718954248366, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1790794, Length=274, Percent_Identity=24.0875912408759, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI87081983, Length=171, Percent_Identity=29.2397660818713, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324264, Length=159, Percent_Identity=30.188679245283, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6322071, Length=213, Percent_Identity=26.2910798122066, Blast_Score=71, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6325414, Length=140, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6321577, Length=148, Percent_Identity=27.7027027027027, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322070, Length=197, Percent_Identity=28.4263959390863, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45121; Mature: 45121
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGMISRPPGAVAQRAAPSRTLLVLLVVMTGLAPISLYLLVPALPLLATTFGRDASVVQM CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH TVSFYMIGIAISQLLLGPLSDRFGRRPVMLAGLALSIIASFGCILADTLPQLIAARFFQA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGASGMVISRAIIRDLYPRERIGAMISLVVAVMMIAQMLSPLTGGLIEIAFGWHAIFYV HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VAAVSIAVGIAVTLALPETRPARVEGASFRRDVVILVKSRAFLGYMLCQVLASQIIFAFA HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHEE GGGPYIVEVQMARSSAEYGAWFATTGFAYFVGNLFCVRYAPRHALDRLIWFGLTLQLTSA CCCCEEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ALNFTWGIFGLNQMPSVLFGTQMLLMFANAFVMANSAAGAISVRPGAAGTASGAMGFLQM HHHHHHHHHCHHHCHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCCCHHHHHHHHH GLGALTSQLGAYLGGHYATTLPLTSAMLTLSLACAGCMIFLVPRTPVTVTVTKELIEAAE HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEHHHHHHHHC EDEGGVM CCCCCCC >Mature Secondary Structure MHGMISRPPGAVAQRAAPSRTLLVLLVVMTGLAPISLYLLVPALPLLATTFGRDASVVQM CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH TVSFYMIGIAISQLLLGPLSDRFGRRPVMLAGLALSIIASFGCILADTLPQLIAARFFQA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGASGMVISRAIIRDLYPRERIGAMISLVVAVMMIAQMLSPLTGGLIEIAFGWHAIFYV HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VAAVSIAVGIAVTLALPETRPARVEGASFRRDVVILVKSRAFLGYMLCQVLASQIIFAFA HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHEE GGGPYIVEVQMARSSAEYGAWFATTGFAYFVGNLFCVRYAPRHALDRLIWFGLTLQLTSA CCCCEEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ALNFTWGIFGLNQMPSVLFGTQMLLMFANAFVMANSAAGAISVRPGAAGTASGAMGFLQM HHHHHHHHHCHHHCHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCCCHHHHHHHHH GLGALTSQLGAYLGGHYATTLPLTSAMLTLSLACAGCMIFLVPRTPVTVTVTKELIEAAE HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEHHHHHHHHC EDEGGVM CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8486276; 9278503; 2694948 [H]