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The map label for this gene is 146342480

Identifier: 146342480

GI number: 146342480

Start: 5826744

End: 5827694

Strand: Reverse

Name: 146342480

Synonym: BRADO5640

Alternate gene names: NA

Gene position: 5827694-5826744 (Counterclockwise)

Preceding gene: 146342481

Following gene: 146342479

Centisome position: 78.15

GC content: 66.14

Gene sequence:

>951_bases
ATGCGCGACAATCGAGTGCTCAGGGGCCGACATCTGCATCGGCTGCAGCGACGCCACTTCATCCTGTTCGACGTGCTGCC
CTTCGTCGGTACACTAGCGGCGCTGGCGCTGCTGGCGGTCCGGCCGATCGGGGGCATGGAAATCGGCCTGTTCGCGGCGA
TGTGGTTGGTCACCGGCCTCGGCCTGACCGTCGGCTATCATCGCCTGTTCACTCACGGCGCCTTCACCACCACGGGCTGG
GTCAGCAATCTCCTGATCGTCATGGGATCGATGGCCGGCAGGGGACCTATGATCTCCTGGGCCGCAATGCATCGCCGCCA
TCACGAGCTGTCCGACCACGACGGCGATCTGCATTCGCCGAACCTGCACGGCGCCGGCTGGCGCCGCCGGCTGCACGGCT
TCGTCCATGCCCAGCTCACCTGGATGGTCGAGCACGACTATCCCAATGTCGCGCATTATGTGCCGGATCTGATCGCCCGG
CGCAGCTGGGTGAACGTCAACGGCTATTACTACGCGTGGGTCCTGCTCGGCCTCGCCATTCCCGCCGTCCTCGGCGGGCT
GATCTCGGCGAGCGTATGGGGCGTGCTCACGGGCTTCCTGTGGGGCGGTGTCGTGCGGATGTTCGTGGTCGAGCAGACGA
TGTCGGCGATCAACTCGCTCAACCATATGCTCGGCAGCCGCCCGTTCCAGACCCGCGGCGACAACAGCCGCAATCTCGGT
GTCATGGCCTGGCTCGCCTGGGGCGAGGGCTGGCACAACAATCATCATGCCTTTCCGTACTCGGCCGCGTTCGGCCTGCG
CTGGTCCGAATTCGATCTCGGCTTTCTGTTCATCAGGGCGCTCGAGGCCGCCGGTCTCGCCTGGAACGTCAAGGTGCCCG
CGCCGGAGCGGATCACCGCGCGCATGACGGCGCACCCGGCCGAAGCCGCGCCCGATTTCGGGCATGGCTGA

Upstream 100 bases:

>100_bases
ACACTTCCCGCCCTCCTTGCGAGGGAGCACCTCCTCGCGGTTGCAGCATGCCGCGAAGCGTGTACTTTGTCGTGCATTGT
TTGATGATCTTTGGAAGGCC

Downstream 100 bases:

>100_bases
TTGTCTTGGGATTGAGCAGGGCGGGCGGGACGCCGCCTGATGCTGTTCAATGGCTATCCGTTCCTGCTGGTGTTTCTGCC
TGTCGCCATCGTGCTGGCGC

Product: putative Fatty-acid desaturase, transmenbrane protein

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Acyl-CoA Desaturase; Delta-9 Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Family Proteiin; Fatty Acid Desaturase Family Protein; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Domain Protein; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Transmembrane Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase; Stearoyl/Acyl-CoA Desaturase; Fatty Acid Desaturase Protein

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MRDNRVLRGRHLHRLQRRHFILFDVLPFVGTLAALALLAVRPIGGMEIGLFAAMWLVTGLGLTVGYHRLFTHGAFTTTGW
VSNLLIVMGSMAGRGPMISWAAMHRRHHELSDHDGDLHSPNLHGAGWRRRLHGFVHAQLTWMVEHDYPNVAHYVPDLIAR
RSWVNVNGYYYAWVLLGLAIPAVLGGLISASVWGVLTGFLWGGVVRMFVVEQTMSAINSLNHMLGSRPFQTRGDNSRNLG
VMAWLAWGEGWHNNHHAFPYSAAFGLRWSEFDLGFLFIRALEAAGLAWNVKVPAPERITARMTAHPAEAAPDFGHG

Sequences:

>Translated_316_residues
MRDNRVLRGRHLHRLQRRHFILFDVLPFVGTLAALALLAVRPIGGMEIGLFAAMWLVTGLGLTVGYHRLFTHGAFTTTGW
VSNLLIVMGSMAGRGPMISWAAMHRRHHELSDHDGDLHSPNLHGAGWRRRLHGFVHAQLTWMVEHDYPNVAHYVPDLIAR
RSWVNVNGYYYAWVLLGLAIPAVLGGLISASVWGVLTGFLWGGVVRMFVVEQTMSAINSLNHMLGSRPFQTRGDNSRNLG
VMAWLAWGEGWHNNHHAFPYSAAFGLRWSEFDLGFLFIRALEAAGLAWNVKVPAPERITARMTAHPAEAAPDFGHG
>Mature_316_residues
MRDNRVLRGRHLHRLQRRHFILFDVLPFVGTLAALALLAVRPIGGMEIGLFAAMWLVTGLGLTVGYHRLFTHGAFTTTGW
VSNLLIVMGSMAGRGPMISWAAMHRRHHELSDHDGDLHSPNLHGAGWRRRLHGFVHAQLTWMVEHDYPNVAHYVPDLIAR
RSWVNVNGYYYAWVLLGLAIPAVLGGLISASVWGVLTGFLWGGVVRMFVVEQTMSAINSLNHMLGSRPFQTRGDNSRNLG
VMAWLAWGEGWHNNHHAFPYSAAFGLRWSEFDLGFLFIRALEAAGLAWNVKVPAPERITARMTAHPAEAAPDFGHG

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI53759151, Length=294, Percent_Identity=27.891156462585, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI148596961, Length=261, Percent_Identity=29.5019157088123, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17561776, Length=269, Percent_Identity=27.1375464684015, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17540878, Length=266, Percent_Identity=26.6917293233083, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17561774, Length=318, Percent_Identity=23.2704402515723, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321383, Length=250, Percent_Identity=26.4, Blast_Score=93, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24646295, Length=298, Percent_Identity=28.5234899328859, Blast_Score=101, Evalue=8e-22,
Organism=Drosophila melanogaster, GI24646303, Length=321, Percent_Identity=28.3489096573209, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24646299, Length=321, Percent_Identity=28.3489096573209, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24646305, Length=321, Percent_Identity=28.3489096573209, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24646301, Length=321, Percent_Identity=28.3489096573209, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24646297, Length=321, Percent_Identity=28.3489096573209, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI21358571, Length=265, Percent_Identity=27.9245283018868, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24646500, Length=263, Percent_Identity=26.615969581749, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI21358573, Length=259, Percent_Identity=28.957528957529, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24662393, Length=278, Percent_Identity=25.1798561151079, Blast_Score=75, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35282; Mature: 35282

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDNRVLRGRHLHRLQRRHFILFDVLPFVGTLAALALLAVRPIGGMEIGLFAAMWLVTGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
GLTVGYHRLFTHGAFTTTGWVSNLLIVMGSMAGRGPMISWAAMHRRHHELSDHDGDLHSP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
NLHGAGWRRRLHGFVHAQLTWMVEHDYPNVAHYVPDLIARRSWVNVNGYYYAWVLLGLAI
CCCCHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHCCEECCCCHHHHHHHHHHHH
PAVLGGLISASVWGVLTGFLWGGVVRMFVVEQTMSAINSLNHMLGSRPFQTRGDNSRNLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
VMAWLAWGEGWHNNHHAFPYSAAFGLRWSEFDLGFLFIRALEAAGLAWNVKVPAPERITA
EEEEEEECCCCCCCCCCCCCHHHHCCEECCCCHHHHHHHHHHHCCCEEEEECCCCCHHHH
RMTAHPAEAAPDFGHG
HHCCCCHHCCCCCCCC
>Mature Secondary Structure
MRDNRVLRGRHLHRLQRRHFILFDVLPFVGTLAALALLAVRPIGGMEIGLFAAMWLVTGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
GLTVGYHRLFTHGAFTTTGWVSNLLIVMGSMAGRGPMISWAAMHRRHHELSDHDGDLHSP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
NLHGAGWRRRLHGFVHAQLTWMVEHDYPNVAHYVPDLIARRSWVNVNGYYYAWVLLGLAI
CCCCHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHCCEECCCCHHHHHHHHHHHH
PAVLGGLISASVWGVLTGFLWGGVVRMFVVEQTMSAINSLNHMLGSRPFQTRGDNSRNLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
VMAWLAWGEGWHNNHHAFPYSAAFGLRWSEFDLGFLFIRALEAAGLAWNVKVPAPERITA
EEEEEEECCCCCCCCCCCCCHHHHCCEECCCCHHHHHHHHHHHCCCEEEEECCCCCHHHH
RMTAHPAEAAPDFGHG
HHCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA