| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342478
Identifier: 146342478
GI number: 146342478
Start: 5824334
End: 5825353
Strand: Reverse
Name: 146342478
Synonym: BRADO5638
Alternate gene names: NA
Gene position: 5825353-5824334 (Counterclockwise)
Preceding gene: 146342479
Following gene: 146342475
Centisome position: 78.12
GC content: 67.35
Gene sequence:
>1020_bases ATGTCCATGAGTTCATCTATTTCAAGTTCTGAGGCCGTCGCGCCGGCGGCCTGGGGCCGCTGCATCGCCGCGTTCCTTGC TGCGCTTGGCGGTGGCGCCTTGCTCGTGCTGGCGCTGATGATCATGGTCGATCCCTATGACAGCGGCCGCTTCGGCCTGC TCGGCATCAAGGGGACGGGCGACAGCTGGGTCGCGATGGCGCAGGCCAGCCGGGCGCGCGATGGCGGCTTCGATGCGGCG ATCATCGGCAACTCCACCGCCCAGCTGATCCGGCCGGAGACGCTGTCGTCCGCGACGGGGCGCCGCTTCGTGCAACTGTT CGTTCCCGGCGCGTCGCCCAACGGGCAGCTCGCGGTGCTCGACTTCTTTCTCCGCCACCATCCGAAGCCGCAGGGACTGG TCGTCGTCATCGATGATCCCTGGTGCGCCCATGACGACGGCGTGGCGTCGAATGACAGCTTTCCCTACTGGCTTTATGGC GACAGCGTGCTCGACTACACCGCGCATCTGTTCACCTGGCGCGCCTTCGATCTGGCGATCCGCCGCATCAAGATCTGGCG CGGCGTTCGCGCCGCTGAGCCGGCCGACGGCTATGCCGACTACGAGATCGACTATCCGCCCGGCAGCCAAGCCCCCGCAG ACGTGCCGCAGCCGCCGTCGCCTCGCTTCGATGGTGCGATCGACATGACGTTCCCGTTCGCGCAACGTTTGCAGCAGGTC GTGCGGCGGCTGCCGGACACGGGCGTCGTGCTGGTGGTGCCGCCGACCTTCTACAGGATCCTGCCGACGCCCAGCAGCCG CGCCGCCCGCGAGCGCGAGGCGTGCAACGCCGCGTTCCGACAGCTCGTCGCTGGGCGCGCGTCCAGCAACCTCATCGATT TCCGGGTCGACAATGCGCTGACGCGAAATCCCGCCAACTTCCTCGACTTCATCCACTATCGCGCGCCGATCGCGCGACGC GTCAATGGCGGCATCATCGCAAGCTTCCGCGATGCAGCGGCGGCGCGGATCGAGTTCTGA
Upstream 100 bases:
>100_bases CAGGACGTGGCCGCCCGGCTGACGCGCCGTCCGAATGTCGGCTTGGCTTGTCTGCTCGGCGTAGCGGTGCTGGCGCTGTT GATCGAGCTCGGAGAGCGTA
Downstream 100 bases:
>100_bases CGCGATCCGTCATTGGGCGCCGTCGAGCGGCGGCAACTGTCCGTCGAGCCACATCTGCCGCGCCCGTCGGCGCTGGATCT TGCCGCTGGTCGTCTTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSMSSSISSSEAVAPAAWGRCIAAFLAALGGGALLVLALMIMVDPYDSGRFGLLGIKGTGDSWVAMAQASRARDGGFDAA IIGNSTAQLIRPETLSSATGRRFVQLFVPGASPNGQLAVLDFFLRHHPKPQGLVVVIDDPWCAHDDGVASNDSFPYWLYG DSVLDYTAHLFTWRAFDLAIRRIKIWRGVRAAEPADGYADYEIDYPPGSQAPADVPQPPSPRFDGAIDMTFPFAQRLQQV VRRLPDTGVVLVVPPTFYRILPTPSSRAAREREACNAAFRQLVAGRASSNLIDFRVDNALTRNPANFLDFIHYRAPIARR VNGGIIASFRDAAAARIEF
Sequences:
>Translated_339_residues MSMSSSISSSEAVAPAAWGRCIAAFLAALGGGALLVLALMIMVDPYDSGRFGLLGIKGTGDSWVAMAQASRARDGGFDAA IIGNSTAQLIRPETLSSATGRRFVQLFVPGASPNGQLAVLDFFLRHHPKPQGLVVVIDDPWCAHDDGVASNDSFPYWLYG DSVLDYTAHLFTWRAFDLAIRRIKIWRGVRAAEPADGYADYEIDYPPGSQAPADVPQPPSPRFDGAIDMTFPFAQRLQQV VRRLPDTGVVLVVPPTFYRILPTPSSRAAREREACNAAFRQLVAGRASSNLIDFRVDNALTRNPANFLDFIHYRAPIARR VNGGIIASFRDAAAARIEF >Mature_338_residues SMSSSISSSEAVAPAAWGRCIAAFLAALGGGALLVLALMIMVDPYDSGRFGLLGIKGTGDSWVAMAQASRARDGGFDAAI IGNSTAQLIRPETLSSATGRRFVQLFVPGASPNGQLAVLDFFLRHHPKPQGLVVVIDDPWCAHDDGVASNDSFPYWLYGD SVLDYTAHLFTWRAFDLAIRRIKIWRGVRAAEPADGYADYEIDYPPGSQAPADVPQPPSPRFDGAIDMTFPFAQRLQQVV RRLPDTGVVLVVPPTFYRILPTPSSRAAREREACNAAFRQLVAGRASSNLIDFRVDNALTRNPANFLDFIHYRAPIARRV NGGIIASFRDAAAARIEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36812; Mature: 36681
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMSSSISSSEAVAPAAWGRCIAAFLAALGGGALLVLALMIMVDPYDSGRFGLLGIKGTG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCC DSWVAMAQASRARDGGFDAAIIGNSTAQLIRPETLSSATGRRFVQLFVPGASPNGQLAVL CHHHHHHHHHHCCCCCCCEEEECCCHHHHCCCHHHCCCCCCEEEEEEECCCCCCCCCHHH DFFLRHHPKPQGLVVVIDDPWCAHDDGVASNDSFPYWLYGDSVLDYTAHLFTWRAFDLAI HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH RRIKIWRGVRAAEPADGYADYEIDYPPGSQAPADVPQPPSPRFDGAIDMTFPFAQRLQQV HHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHH VRRLPDTGVVLVVPPTFYRILPTPSSRAAREREACNAAFRQLVAGRASSNLIDFRVDNAL HHHCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCH TRNPANFLDFIHYRAPIARRVNGGIIASFRDAAAARIEF HCCHHHHHHHHHHHCCHHHHCCCCEEEEEHHCCHHCCCC >Mature Secondary Structure SMSSSISSSEAVAPAAWGRCIAAFLAALGGGALLVLALMIMVDPYDSGRFGLLGIKGTG CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCC DSWVAMAQASRARDGGFDAAIIGNSTAQLIRPETLSSATGRRFVQLFVPGASPNGQLAVL CHHHHHHHHHHCCCCCCCEEEECCCHHHHCCCHHHCCCCCCEEEEEEECCCCCCCCCHHH DFFLRHHPKPQGLVVVIDDPWCAHDDGVASNDSFPYWLYGDSVLDYTAHLFTWRAFDLAI HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH RRIKIWRGVRAAEPADGYADYEIDYPPGSQAPADVPQPPSPRFDGAIDMTFPFAQRLQQV HHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHH VRRLPDTGVVLVVPPTFYRILPTPSSRAAREREACNAAFRQLVAGRASSNLIDFRVDNAL HHHCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCH TRNPANFLDFIHYRAPIARRVNGGIIASFRDAAAARIEF HCCHHHHHHHHHHHCCHHHHCCCCEEEEEHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA