| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342466
Identifier: 146342466
GI number: 146342466
Start: 5813682
End: 5814416
Strand: Reverse
Name: 146342466
Synonym: BRADO5625
Alternate gene names: NA
Gene position: 5814416-5813682 (Counterclockwise)
Preceding gene: 146342470
Following gene: 146342465
Centisome position: 77.98
GC content: 67.07
Gene sequence:
>735_bases ATGACGCCACGAATCAGCACCACCAGCACCATCTCGCAGCGCCTTCCGACGCGCTGGCTCGGCATGGTCGCACTGGCGCT CGCGCTGGTCCTGCCGCTCGGAACCGGGTCCGTCCGCGCCGCGCCCAGCCCGGCGGCGGCAAGCGCCGCCAGCACCACGC ATGTCTACCTGCTGCGCGGCGTGCTCAACATCTTCTCTCTGGGTCTTGACGATATTGCCGCCAAGCTCGATTCGCAGGGT ATCCCGAACACCGTCGCGAATTTCGTCTCATGGTCGTCGCTCGCCGACGATGCGGCGACTGCCTACAAGGCCGGCCGCAT CAAAACCATCATCCTGGTCGGCCATTCCTCGGGTGCGACCGCGCTGCCGGACATGATCAACAAGCTCGGCCAGCTCGGCG TGCCGGTGAAGCTCGCGATCGGCCTCGACTCCGTGTTCAAGACCAAGCTCGTCGGCGGCAATGCCGAGCGCTACATCAAC TTCTATATCGCCAGCGGCGCCGGCGAGCCGGTGCGCCGTGACGACGGCTTCCACGGCAAGCTCGAGAATGTCGACGTGGG GTCTGCGGTGCCCGGCGTCGGGCACATCACGATCGAGAAGAACCAGATCATGCAGCAGAAGGTGATCGGCGCCATCGACT CGGTCGTCTTCAGCGGCAAGGGACGGCAGCCGGCTGCGCCGCCGACCCGCATGGCCGCCCCGCAGCGCGCCGCCAGCGCC ACGGGATACCGGTAG
Upstream 100 bases:
>100_bases GAATGATGAACGCCGCCGCTGATGCCGTGCCATGTTGCGTCCGCGAGCATCTCTTGTACGGTTCGCGCCGTCTCGACATT TCCGCCGTGGAGAAGGACCG
Downstream 100 bases:
>100_bases TCATCCGGGGGGCGCGTTGTGGCGCCCCAAAATGCTCCCATTCGGCGACGACAAGCGGTATGGCAGGGCAGCATGACCCA GCCTGTTCCTAGCTTTGAGT
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MTPRISTTSTISQRLPTRWLGMVALALALVLPLGTGSVRAAPSPAAASAASTTHVYLLRGVLNIFSLGLDDIAAKLDSQG IPNTVANFVSWSSLADDAATAYKAGRIKTIILVGHSSGATALPDMINKLGQLGVPVKLAIGLDSVFKTKLVGGNAERYIN FYIASGAGEPVRRDDGFHGKLENVDVGSAVPGVGHITIEKNQIMQQKVIGAIDSVVFSGKGRQPAAPPTRMAAPQRAASA TGYR
Sequences:
>Translated_244_residues MTPRISTTSTISQRLPTRWLGMVALALALVLPLGTGSVRAAPSPAAASAASTTHVYLLRGVLNIFSLGLDDIAAKLDSQG IPNTVANFVSWSSLADDAATAYKAGRIKTIILVGHSSGATALPDMINKLGQLGVPVKLAIGLDSVFKTKLVGGNAERYIN FYIASGAGEPVRRDDGFHGKLENVDVGSAVPGVGHITIEKNQIMQQKVIGAIDSVVFSGKGRQPAAPPTRMAAPQRAASA TGYR >Mature_243_residues TPRISTTSTISQRLPTRWLGMVALALALVLPLGTGSVRAAPSPAAASAASTTHVYLLRGVLNIFSLGLDDIAAKLDSQGI PNTVANFVSWSSLADDAATAYKAGRIKTIILVGHSSGATALPDMINKLGQLGVPVKLAIGLDSVFKTKLVGGNAERYINF YIASGAGEPVRRDDGFHGKLENVDVGSAVPGVGHITIEKNQIMQQKVIGAIDSVVFSGKGRQPAAPPTRMAAPQRAASAT GYR
Specific function: Unknown
COG id: COG3319
COG function: function code Q; Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25342; Mature: 25210
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRISTTSTISQRLPTRWLGMVALALALVLPLGTGSVRAAPSPAAASAASTTHVYLLRG CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHH VLNIFSLGLDDIAAKLDSQGIPNTVANFVSWSSLADDAATAYKAGRIKTIILVGHSSGAT HHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC ALPDMINKLGQLGVPVKLAIGLDSVFKTKLVGGNAERYINFYIASGAGEPVRRDDGFHGK HHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCC LENVDVGSAVPGVGHITIEKNQIMQQKVIGAIDSVVFSGKGRQPAAPPTRMAAPQRAASA CCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHC TGYR CCCC >Mature Secondary Structure TPRISTTSTISQRLPTRWLGMVALALALVLPLGTGSVRAAPSPAAASAASTTHVYLLRG CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHH VLNIFSLGLDDIAAKLDSQGIPNTVANFVSWSSLADDAATAYKAGRIKTIILVGHSSGAT HHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC ALPDMINKLGQLGVPVKLAIGLDSVFKTKLVGGNAERYINFYIASGAGEPVRRDDGFHGK HHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCC LENVDVGSAVPGVGHITIEKNQIMQQKVIGAIDSVVFSGKGRQPAAPPTRMAAPQRAASA CCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHC TGYR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA