| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342465
Identifier: 146342465
GI number: 146342465
Start: 5812522
End: 5813565
Strand: Reverse
Name: 146342465
Synonym: BRADO5624
Alternate gene names: NA
Gene position: 5813565-5812522 (Counterclockwise)
Preceding gene: 146342466
Following gene: 146342458
Centisome position: 77.97
GC content: 68.97
Gene sequence:
>1044_bases ATGACCCGTTCGGCGCGAATCGCGAGGGGCTGGCTCGGCGCCGCCCAGGTTGCCGCCAGGCAGGGACTGTCCGGGCTGCT TGCCGCAGGGCTCATCGCGACCGCCGCGCCGGCGACCGCCAAGGCCGGAGCTGCTCCGGCAACCGCCCCCGGCAAGGCCG CCAAGACCGCCGCGGCGTCACCGACCCAGGCTGCCATCCGCCCTGCCGCGCCGGAACATCCTCCCGAGCCGGTTCAGACG CTGCCGCCGCCCCGGGTCTATCTGTTCCGCGGCGCGCTCGGCCCGCTGTTCTCCACCGGCATGGACCGCCTCGCCGAGAA GATCGAGAAGGCGGGCTACTGGGCCAGCGTCTATGAATTCACGCTGTGCGACCTGATCGCGCTTCAGGTCGCCAAGAACT ACCGCCAGGACCAGGCACCGATCGTGCTGATCGGCCATTCGATGGGCGGACTCTGCAGCGTCCGCATCGCGATCACGCTG CAGGAGCAGAACATTCCGGTCGCGCTCGTCGTCACCGTCGACCCCGCGCATGCGACCAAGAGCGTGCCGCCGAACGTGCA GCGCTTCATCAACCTGTTCCTGTCCGACAACATTCTCGGCGGCGGCGACGTCAAGCCGGAGCCCGGCTTTCGCGGCCATT ACGCCAGCTTCGACATGAAGGACCATGACGAGGTCACACACATCAACATCGACAAGATGGAGGATGTGCATGCTCAGTTG GTCACCATGATCAGCCAGCTCTCGCAGACCTCGGCCAGCGCGGAGGCGGATCCGGTGCCGCTGCGCTATCTGATCCCGCC GAAGACGTCGGTCGAGCTGTGGGACAGCGGCACCGCCGTTGCGGTGCGCCCCGGCGAAACCCTCGACCAGATCGCCGCCG CGTACCGTATTCCGCTCTGGGCCCTGCAGCAGTCCAACCGTGGCCTCGCCACCCAGCCGCTCGTGCCCGGCCAGCGCATC ATCCTGCCGCGCCATCTGCTGCCGCAGGCGGCCAACCAGCCGCCGCAACAGTCATCGGAAGCGCCGGCGCCGGCCCGGCG CTGA
Upstream 100 bases:
>100_bases TTGTGGCGCCCCAAAATGCTCCCATTCGGCGACGACAAGCGGTATGGCAGGGCAGCATGACCCAGCCTGTTCCTAGCTTT GAGTTTTCCCGGGAGCGCGA
Downstream 100 bases:
>100_bases CCGGGCGAGCCCGTCAGCCCGCCGGCAGGAACGGGATGATCATCGGCACGCGCCGGCTGTAGGCCACGTAGTCGGGCCCC AGCTCCTGCGCCAGGAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTRSARIARGWLGAAQVAARQGLSGLLAAGLIATAAPATAKAGAAPATAPGKAAKTAAASPTQAAIRPAAPEHPPEPVQT LPPPRVYLFRGALGPLFSTGMDRLAEKIEKAGYWASVYEFTLCDLIALQVAKNYRQDQAPIVLIGHSMGGLCSVRIAITL QEQNIPVALVVTVDPAHATKSVPPNVQRFINLFLSDNILGGGDVKPEPGFRGHYASFDMKDHDEVTHINIDKMEDVHAQL VTMISQLSQTSASAEADPVPLRYLIPPKTSVELWDSGTAVAVRPGETLDQIAAAYRIPLWALQQSNRGLATQPLVPGQRI ILPRHLLPQAANQPPQQSSEAPAPARR
Sequences:
>Translated_347_residues MTRSARIARGWLGAAQVAARQGLSGLLAAGLIATAAPATAKAGAAPATAPGKAAKTAAASPTQAAIRPAAPEHPPEPVQT LPPPRVYLFRGALGPLFSTGMDRLAEKIEKAGYWASVYEFTLCDLIALQVAKNYRQDQAPIVLIGHSMGGLCSVRIAITL QEQNIPVALVVTVDPAHATKSVPPNVQRFINLFLSDNILGGGDVKPEPGFRGHYASFDMKDHDEVTHINIDKMEDVHAQL VTMISQLSQTSASAEADPVPLRYLIPPKTSVELWDSGTAVAVRPGETLDQIAAAYRIPLWALQQSNRGLATQPLVPGQRI ILPRHLLPQAANQPPQQSSEAPAPARR >Mature_346_residues TRSARIARGWLGAAQVAARQGLSGLLAAGLIATAAPATAKAGAAPATAPGKAAKTAAASPTQAAIRPAAPEHPPEPVQTL PPPRVYLFRGALGPLFSTGMDRLAEKIEKAGYWASVYEFTLCDLIALQVAKNYRQDQAPIVLIGHSMGGLCSVRIAITLQ EQNIPVALVVTVDPAHATKSVPPNVQRFINLFLSDNILGGGDVKPEPGFRGHYASFDMKDHDEVTHINIDKMEDVHAQLV TMISQLSQTSASAEADPVPLRYLIPPKTSVELWDSGTAVAVRPGETLDQIAAAYRIPLWALQQSNRGLATQPLVPGQRII LPRHLLPQAANQPPQQSSEAPAPARR
Specific function: Unknown
COG id: COG3319
COG function: function code Q; Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36859; Mature: 36727
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSARIARGWLGAAQVAARQGLSGLLAAGLIATAAPATAKAGAAPATAPGKAAKTAAAS CCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCC PTQAAIRPAAPEHPPEPVQTLPPPRVYLFRGALGPLFSTGMDRLAEKIEKAGYWASVYEF CCHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH TLCDLIALQVAKNYRQDQAPIVLIGHSMGGLCSVRIAITLQEQNIPVALVVTVDPAHATK HHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEECCHHCCC SVPPNVQRFINLFLSDNILGGGDVKPEPGFRGHYASFDMKDHDEVTHINIDKMEDVHAQL CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEHHHHHHHHHHH VTMISQLSQTSASAEADPVPLRYLIPPKTSVELWDSGTAVAVRPGETLDQIAAAYRIPLW HHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCEEEECCCCHHHHHHHHHHCCCE ALQQSNRGLATQPLVPGQRIILPRHLLPQAANQPPQQSSEAPAPARR EEECCCCCCCCCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRSARIARGWLGAAQVAARQGLSGLLAAGLIATAAPATAKAGAAPATAPGKAAKTAAAS CCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCC PTQAAIRPAAPEHPPEPVQTLPPPRVYLFRGALGPLFSTGMDRLAEKIEKAGYWASVYEF CCHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH TLCDLIALQVAKNYRQDQAPIVLIGHSMGGLCSVRIAITLQEQNIPVALVVTVDPAHATK HHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEECCHHCCC SVPPNVQRFINLFLSDNILGGGDVKPEPGFRGHYASFDMKDHDEVTHINIDKMEDVHAQL CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEHHHHHHHHHHH VTMISQLSQTSASAEADPVPLRYLIPPKTSVELWDSGTAVAVRPGETLDQIAAAYRIPLW HHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCEEEECCCCHHHHHHHHHHCCCE ALQQSNRGLATQPLVPGQRIILPRHLLPQAANQPPQQSSEAPAPARR EEECCCCCCCCCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA