| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342457
Identifier: 146342457
GI number: 146342457
Start: 5804330
End: 5805565
Strand: Direct
Name: 146342457
Synonym: BRADO5616
Alternate gene names: NA
Gene position: 5804330-5805565 (Clockwise)
Preceding gene: 146342456
Following gene: 146342459
Centisome position: 77.84
GC content: 64.64
Gene sequence:
>1236_bases GTGTTTCTTCGCAAGGGCCCGATCGGGCTCGCCCTTTGCTGGCTGATCGTCGCGTGTCCGGGTCCGGCGATCCGGGCGCT GGAGGTCTCGCCGTCGGCACAGGCAACGCCGCCATTGGCAGCGATCGCGCCTCCTCCAACGCCCGTGCCGCTCGAAGATG CGCTGTCGAAAGCGGCCCATGACCTGCTCTCCAAATTCGAGGACGACGCGCAGGGCCAGCTCGAACTGGTGATCGACCCG TTGATCGACGGCGTCACCCGGGTGCAATCGACGGCAACGTTGCTGGAGCAGCAGCGCATCACCGCGCTCATCGCGGCGAA CTACCCCCGGATCCACACCCTGCCTTTCACGGTGGCGTCGCTGTTACGAAAGCCGCTCGTGCTGATCGGCACCCTGACTC CGATCAACAACGAGGGCCTGCCTACGGGTCCTCGGGACGCCTACCGGATCTGCCTTGCGATCGCCGATCTGAACAGTAAC ACTGTGGTCTCAAAAGGTGTCGCGCGCGCGCTGCCCGACGACGTCGATCCGACACCGGTCCCCTTCTTCAAGGACAGTCC GGTCTACACCAAGGACCCGGCCACCGAGGCCTATGTGAGAAGCTGCCAGGGCGCAAAGCCGGGCGACGCCGTCGACCAGA CCTACACCAATCACATCCTCGCATCGGCTCAGGTCAACGAGGCAATCGAGGCCTACAATGCCGGCCGCTACAAGGCCGCG CTCGAGCTCTATCAGACCGCGCTACGGATGGACGGCGGCGAGCAGCTGCGCATCTACAGCGGAATCTACCTGTCCGCCCT CAAGCTCGGCCACACGCAACTCGCCATGCAGGCATTCGACCGGCTGCTCGATTTCGGGCTGAAGAACAGCGATCGGCTCG CGATCAAGTTCCTGTTCAAGCCGGGCTCGACGTTGTTCTACACCGATCCGGAGGTGCGCGCGCCCTATCAGGCCTGGATC GGCAAGATCGCGCGACGGACCGCCGCCAATCATGTCTGCCTCGAAGTGGCCGGTCATACCAGCGCGACGGGATATTCCGG CGTCAACGACCGGCTGTCCGTCCTGCGCGCCGCCTATGTCAAGGATCAGATCCTGGCCGAGGACAAAGGCCTCGCGGGCC GACTGATCGCCAGCGGCCGCGGGTCTCGCGAGATGATCGTCGGTACCGGCCGCGACGATCCGAGCGACGCACTCGACCGT CGTGTCGAGCTCAGGATCATCAATTGCTCGAGCTGA
Upstream 100 bases:
>100_bases ACTCGAAAAATCCACAAACCCCGGTCGAGCGACCTGCTTTCGACAAGAAATTCCTCAATCATTCCACAGGTTGGTATCTG TCGTCTGACGAGAGCACGTC
Downstream 100 bases:
>100_bases TCCGAATCGATCTGCCGGCGCTCCGAACAGACGCAATCGATCCCCTTTCGTCCGCGCCACCTCGAAAGAGATCCGCGCTC GGCGAGATGCCCGTCGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MFLRKGPIGLALCWLIVACPGPAIRALEVSPSAQATPPLAAIAPPPTPVPLEDALSKAAHDLLSKFEDDAQGQLELVIDP LIDGVTRVQSTATLLEQQRITALIAANYPRIHTLPFTVASLLRKPLVLIGTLTPINNEGLPTGPRDAYRICLAIADLNSN TVVSKGVARALPDDVDPTPVPFFKDSPVYTKDPATEAYVRSCQGAKPGDAVDQTYTNHILASAQVNEAIEAYNAGRYKAA LELYQTALRMDGGEQLRIYSGIYLSALKLGHTQLAMQAFDRLLDFGLKNSDRLAIKFLFKPGSTLFYTDPEVRAPYQAWI GKIARRTAANHVCLEVAGHTSATGYSGVNDRLSVLRAAYVKDQILAEDKGLAGRLIASGRGSREMIVGTGRDDPSDALDR RVELRIINCSS
Sequences:
>Translated_411_residues MFLRKGPIGLALCWLIVACPGPAIRALEVSPSAQATPPLAAIAPPPTPVPLEDALSKAAHDLLSKFEDDAQGQLELVIDP LIDGVTRVQSTATLLEQQRITALIAANYPRIHTLPFTVASLLRKPLVLIGTLTPINNEGLPTGPRDAYRICLAIADLNSN TVVSKGVARALPDDVDPTPVPFFKDSPVYTKDPATEAYVRSCQGAKPGDAVDQTYTNHILASAQVNEAIEAYNAGRYKAA LELYQTALRMDGGEQLRIYSGIYLSALKLGHTQLAMQAFDRLLDFGLKNSDRLAIKFLFKPGSTLFYTDPEVRAPYQAWI GKIARRTAANHVCLEVAGHTSATGYSGVNDRLSVLRAAYVKDQILAEDKGLAGRLIASGRGSREMIVGTGRDDPSDALDR RVELRIINCSS >Mature_411_residues MFLRKGPIGLALCWLIVACPGPAIRALEVSPSAQATPPLAAIAPPPTPVPLEDALSKAAHDLLSKFEDDAQGQLELVIDP LIDGVTRVQSTATLLEQQRITALIAANYPRIHTLPFTVASLLRKPLVLIGTLTPINNEGLPTGPRDAYRICLAIADLNSN TVVSKGVARALPDDVDPTPVPFFKDSPVYTKDPATEAYVRSCQGAKPGDAVDQTYTNHILASAQVNEAIEAYNAGRYKAA LELYQTALRMDGGEQLRIYSGIYLSALKLGHTQLAMQAFDRLLDFGLKNSDRLAIKFLFKPGSTLFYTDPEVRAPYQAWI GKIARRTAANHVCLEVAGHTSATGYSGVNDRLSVLRAAYVKDQILAEDKGLAGRLIASGRGSREMIVGTGRDDPSDALDR RVELRIINCSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44338; Mature: 44338
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION ; PS51123 OMPA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLRKGPIGLALCWLIVACPGPAIRALEVSPSAQATPPLAAIAPPPTPVPLEDALSKAAH CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHH DLLSKFEDDAQGQLELVIDPLIDGVTRVQSTATLLEQQRITALIAANYPRIHTLPFTVAS HHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHH LLRKPLVLIGTLTPINNEGLPTGPRDAYRICLAIADLNSNTVVSKGVARALPDDVDPTPV HHHCCEEEEEEECCCCCCCCCCCCHHHHEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCC PFFKDSPVYTKDPATEAYVRSCQGAKPGDAVDQTYTNHILASAQVNEAIEAYNAGRYKAA CCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LELYQTALRMDGGEQLRIYSGIYLSALKLGHTQLAMQAFDRLLDFGLKNSDRLAIKFLFK HHHHHHHHHCCCCCEEEEECCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC PGSTLFYTDPEVRAPYQAWIGKIARRTAANHVCLEVAGHTSATGYSGVNDRLSVLRAAYV CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH KDQILAEDKGLAGRLIASGRGSREMIVGTGRDDPSDALDRRVELRIINCSS HHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHCCEEEEEEEECCC >Mature Secondary Structure MFLRKGPIGLALCWLIVACPGPAIRALEVSPSAQATPPLAAIAPPPTPVPLEDALSKAAH CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHH DLLSKFEDDAQGQLELVIDPLIDGVTRVQSTATLLEQQRITALIAANYPRIHTLPFTVAS HHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHH LLRKPLVLIGTLTPINNEGLPTGPRDAYRICLAIADLNSNTVVSKGVARALPDDVDPTPV HHHCCEEEEEEECCCCCCCCCCCCHHHHEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCC PFFKDSPVYTKDPATEAYVRSCQGAKPGDAVDQTYTNHILASAQVNEAIEAYNAGRYKAA CCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LELYQTALRMDGGEQLRIYSGIYLSALKLGHTQLAMQAFDRLLDFGLKNSDRLAIKFLFK HHHHHHHHHCCCCCEEEEECCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC PGSTLFYTDPEVRAPYQAWIGKIARRTAANHVCLEVAGHTSATGYSGVNDRLSVLRAAYV CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH KDQILAEDKGLAGRLIASGRGSREMIVGTGRDDPSDALDRRVELRIINCSS HHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA