| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342386
Identifier: 146342386
GI number: 146342386
Start: 5726651
End: 5727802
Strand: Direct
Name: 146342386
Synonym: BRADO5543
Alternate gene names: NA
Gene position: 5726651-5727802 (Clockwise)
Preceding gene: 146342384
Following gene: 146342387
Centisome position: 76.8
GC content: 67.19
Gene sequence:
>1152_bases ATGCCATCCAAGCGTTTTCTGATTCCGGGACTGATCGCGTGCCTCCTCGGCGCGGCGTCCGCCGCTTCCGCGGCCGACGG AGAGCCGTGGCTGGTGAGCAAATCATCCGGCGAGATCTGGGTGACGACGCAAGGCGGAACTCAAGGCGCGACACAGGTGT CGCTCGGTTCGGCAGAGGCGCTGAAGCCCGGCGATACGATCCGCACCGGCCCGAACGGACGCGTGCGGCTGACCCGTGGC GCCGAGACGATGGTCATCGCGCCGAACTCCGAGGTCGGCCTGCCCGCCGCCGCCAAGGATGGCATGGCAACCACGATCCT GCAGCGCGCGGGCTCGATCCTGCTCGATGTCGAGAAGCGCAACGTGCAGCATTTCGAGGTCGAGACGCCCTTTCTCGCCG CCGTGGTGAAGGGCACGCAGTTCAGAGTCACCGTGGAAGGCCGCAGAGCCAAGGTCGAAGTCAGTCGCGGCCAGGTGCAG GTGTCCGACTTCAAGTCCGGCCAGATCGCCCAAGTGATGCCCGGCCAGGCGGCGACCACGTCCACCATCGGCCGCTCGGG ACTCAAACTCTCCGGCGCCGGCAACTTCAATCCGATCGAACAGGGCCGCCCCCGCGCGCCGACCATCAACCCGGTTTCGG TGCCACGCGACGGCCTGCATGCGCCGCGCGAAACCAAGGGCAGCGTCATCCACGCGCTGAACGGCAACGCGCCAGCCCGC GCGAGCACGCCACCGTCGTCGCCGCAGCGCTCCGCCGCCGCGTCCACCGGAGCCAAACCAAACGTGGTGCGGATCTCGAG CTCCATCGGCGAAGTCAATCTGAACATTCAGAAGGCCACGCGGGGCCTTGCCCACGGCACCCAACAAGGTATGGGCGGCG GACGAAGCAGCCTATCGACCGATACCCGGGGCAACAACGGCAACTCGACCAGCAGCTCCGGGGCGTCATCGGTGTCAGCC GCCGTGACCGCGGCCGTCGGCTCACCGACTGCCTCTGCCAGCAGCACGACGACTGGTAGCGCCGCCGCAAATAACAACGG CAACGGCAACAGCGGCAACGGAAATAGCGGCAACAGCGGGAAGGGCAACAGCGACGACGACCATGGCAGCGGCCGTGGTC GGGGTCATGCCTACGGCCACAACAAGGATTGA
Upstream 100 bases:
>100_bases TGATCCGTAAATGCGTGCACCAGACTCCATCGCAACTCCTAAGGGTCTCTTGAAACATTTGGATTAGTTTCGAGCGTCGC CAACGACGCGAGCTCGTGCC
Downstream 100 bases:
>100_bases CGCAGCGCGACAGCTGTTCTTGCGACGATAGCTGACAAGGGACTCTGCCAGGACCGATAACGGCCCTGCAGATGGGGACG CAGAGAGGTTGCGGGGATCG
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MPSKRFLIPGLIACLLGAASAASAADGEPWLVSKSSGEIWVTTQGGTQGATQVSLGSAEALKPGDTIRTGPNGRVRLTRG AETMVIAPNSEVGLPAAAKDGMATTILQRAGSILLDVEKRNVQHFEVETPFLAAVVKGTQFRVTVEGRRAKVEVSRGQVQ VSDFKSGQIAQVMPGQAATTSTIGRSGLKLSGAGNFNPIEQGRPRAPTINPVSVPRDGLHAPRETKGSVIHALNGNAPAR ASTPPSSPQRSAAASTGAKPNVVRISSSIGEVNLNIQKATRGLAHGTQQGMGGGRSSLSTDTRGNNGNSTSSSGASSVSA AVTAAVGSPTASASSTTTGSAAANNNGNGNSGNGNSGNSGKGNSDDDHGSGRGRGHAYGHNKD
Sequences:
>Translated_383_residues MPSKRFLIPGLIACLLGAASAASAADGEPWLVSKSSGEIWVTTQGGTQGATQVSLGSAEALKPGDTIRTGPNGRVRLTRG AETMVIAPNSEVGLPAAAKDGMATTILQRAGSILLDVEKRNVQHFEVETPFLAAVVKGTQFRVTVEGRRAKVEVSRGQVQ VSDFKSGQIAQVMPGQAATTSTIGRSGLKLSGAGNFNPIEQGRPRAPTINPVSVPRDGLHAPRETKGSVIHALNGNAPAR ASTPPSSPQRSAAASTGAKPNVVRISSSIGEVNLNIQKATRGLAHGTQQGMGGGRSSLSTDTRGNNGNSTSSSGASSVSA AVTAAVGSPTASASSTTTGSAAANNNGNGNSGNGNSGNSGKGNSDDDHGSGRGRGHAYGHNKD >Mature_382_residues PSKRFLIPGLIACLLGAASAASAADGEPWLVSKSSGEIWVTTQGGTQGATQVSLGSAEALKPGDTIRTGPNGRVRLTRGA ETMVIAPNSEVGLPAAAKDGMATTILQRAGSILLDVEKRNVQHFEVETPFLAAVVKGTQFRVTVEGRRAKVEVSRGQVQV SDFKSGQIAQVMPGQAATTSTIGRSGLKLSGAGNFNPIEQGRPRAPTINPVSVPRDGLHAPRETKGSVIHALNGNAPARA STPPSSPQRSAAASTGAKPNVVRISSSIGEVNLNIQKATRGLAHGTQQGMGGGRSSLSTDTRGNNGNSTSSSGASSVSAA VTAAVGSPTASASSTTTGSAAANNNGNGNSGNGNSGNSGKGNSDDDHGSGRGRGHAYGHNKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38512; Mature: 38381
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSKRFLIPGLIACLLGAASAASAADGEPWLVSKSSGEIWVTTQGGTQGATQVSLGSAEA CCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCEEEECCCCCC LKPGDTIRTGPNGRVRLTRGAETMVIAPNSEVGLPAAAKDGMATTILQRAGSILLDVEKR CCCCCCEEECCCCCEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECC NVQHFEVETPFLAAVVKGTQFRVTVEGRRAKVEVSRGQVQVSDFKSGQIAQVMPGQAATT CCEEEEECCCCEEHEECCCEEEEEECCCEEEEEECCCEEEEECCCCCCEEEECCCCCCHH STIGRSGLKLSGAGNFNPIEQGRPRAPTINPVSVPRDGLHAPRETKGSVIHALNGNAPAR HHHCCCCEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC ASTPPSSPQRSAAASTGAKPNVVRISSSIGEVNLNIQKATRGLAHGTQQGMGGGRSSLST CCCCCCCCCHHHHHHCCCCCCEEEEECCCCEEEEEHHHHHHHHHHCHHHCCCCCCCCCCC DTRGNNGNSTSSSGASSVSAAVTAAVGSPTASASSTTTGSAAANNNGNGNSGNGNSGNSG CCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KGNSDDDHGSGRGRGHAYGHNKD CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PSKRFLIPGLIACLLGAASAASAADGEPWLVSKSSGEIWVTTQGGTQGATQVSLGSAEA CCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCEEEECCCCCC LKPGDTIRTGPNGRVRLTRGAETMVIAPNSEVGLPAAAKDGMATTILQRAGSILLDVEKR CCCCCCEEECCCCCEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECC NVQHFEVETPFLAAVVKGTQFRVTVEGRRAKVEVSRGQVQVSDFKSGQIAQVMPGQAATT CCEEEEECCCCEEHEECCCEEEEEECCCEEEEEECCCEEEEECCCCCCEEEECCCCCCHH STIGRSGLKLSGAGNFNPIEQGRPRAPTINPVSVPRDGLHAPRETKGSVIHALNGNAPAR HHHCCCCEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC ASTPPSSPQRSAAASTGAKPNVVRISSSIGEVNLNIQKATRGLAHGTQQGMGGGRSSLST CCCCCCCCCHHHHHHCCCCCCEEEEECCCCEEEEEHHHHHHHHHHCHHHCCCCCCCCCCC DTRGNNGNSTSSSGASSVSAAVTAAVGSPTASASSTTTGSAAANNNGNGNSGNGNSGNSG CCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KGNSDDDHGSGRGRGHAYGHNKD CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA