Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146342381

Identifier: 146342381

GI number: 146342381

Start: 5721581

End: 5722306

Strand: Direct

Name: 146342381

Synonym: BRADO5538

Alternate gene names: NA

Gene position: 5721581-5722306 (Clockwise)

Preceding gene: 146342379

Following gene: 146342384

Centisome position: 76.73

GC content: 67.08

Gene sequence:

>726_bases
ATGGATGCCGACAAGATCGTCATCAACAAGCTCAGGGAGCATTCCCGGCTTTCCGGCGAAGACATCGCCGAGATCAGAGA
TCTCACCTTCATGCCGCGCGGGCTCGCCGATCAGGAGGACCTGATCCGGCAGGGCGACGAGCCCGACAAGTCCGTCGTCG
TGCTCTCCGGCTGGGTGGCGCGCTATCATCTGCTGCCGGGCGGGGGCCGGCAATATCTCTCGTTCCACATGGCCGGCGAC
TGGCCGGATGCGCAGGCGCTGTTCCTTGACCGCATGGATCATGCGGTGTGCGCGATCGGACCGGCCGTGGTCTCCGGCAT
CGCGCACAAGGAGCTGACGCGGGCGCTCGTCCGGCGCCCGGCGCTCGGCTTTGCGATCTGGCGCGAGACGCTGATCGACG
CGGCGATCTTCCGCGAGGCGATCACCAACAACAGCGCACGGGGCAAGCCGGCGCGCATGGCCCATCTGTTCTGCGAGCTG
TTCTATCGCGCCCGCACGCTCGGCCATGTCGAGGGCGATCAGCTGCTGCTCCCGGTCAGCCTGGCGCAGCTCGGCGAGGC
GTTGGGCATGGCGATCGCGACGGTGAATCGCACGCTGGTCGAGTTGCGCGCCAGCCGCGCGGTCGATTTCCGCAGCGGCA
CGATGTCGGTGCACAACTGGCAACGGCTGTGCGCGATCGGCGAGTTCGATCCCGGCTATCTGCACCTGAAGAAGCAGCCG
CGCTGA

Upstream 100 bases:

>100_bases
GCGACATTCTCCGCATTTCCTGATACCAACGTCGACCTTAGTAGGAACCGTGGGCCGCGTGATCTCATTTGATACGTGAG
AATCAACAGGCCCGATTTCC

Downstream 100 bases:

>100_bases
GACGCGGCGTCAGATGCACAGGCCGATCAGCTTGATGTTGAGATGGCAGTCCTTGCTGGCGGGAGGCTTGGCGCCCCAGC
GCGTCTGTGTCGTGGCCTCG

Product: CRP/FNR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator Crp/Fnr Family; Crp/Fnr Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Transcriptional Regulator; Crp/Fnr-Family Transcriptional Regulator; Crp-Fnr Family Transcriptional Regulator; Regulatory Protein Crp; Transcriptional Regulator Fnr-Type; Transcriptional Regulator Crp; Transcription Regulator Protein; Crp-Type Transcriptional Activatory Protein; Transcriptional Regulator Protein; Signal Transduction Histidine Kinase; Transcriptional Regulator Crp-Fnr Family

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MDADKIVINKLREHSRLSGEDIAEIRDLTFMPRGLADQEDLIRQGDEPDKSVVVLSGWVARYHLLPGGGRQYLSFHMAGD
WPDAQALFLDRMDHAVCAIGPAVVSGIAHKELTRALVRRPALGFAIWRETLIDAAIFREAITNNSARGKPARMAHLFCEL
FYRARTLGHVEGDQLLLPVSLAQLGEALGMAIATVNRTLVELRASRAVDFRSGTMSVHNWQRLCAIGEFDPGYLHLKKQP
R

Sequences:

>Translated_241_residues
MDADKIVINKLREHSRLSGEDIAEIRDLTFMPRGLADQEDLIRQGDEPDKSVVVLSGWVARYHLLPGGGRQYLSFHMAGD
WPDAQALFLDRMDHAVCAIGPAVVSGIAHKELTRALVRRPALGFAIWRETLIDAAIFREAITNNSARGKPARMAHLFCEL
FYRARTLGHVEGDQLLLPVSLAQLGEALGMAIATVNRTLVELRASRAVDFRSGTMSVHNWQRLCAIGEFDPGYLHLKKQP
R
>Mature_241_residues
MDADKIVINKLREHSRLSGEDIAEIRDLTFMPRGLADQEDLIRQGDEPDKSVVVLSGWVARYHLLPGGGRQYLSFHMAGD
WPDAQALFLDRMDHAVCAIGPAVVSGIAHKELTRALVRRPALGFAIWRETLIDAAIFREAITNNSARGKPARMAHLFCEL
FYRARTLGHVEGDQLLLPVSLAQLGEALGMAIATVNRTLVELRASRAVDFRSGTMSVHNWQRLCAIGEFDPGYLHLKKQP
R

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26859; Mature: 26859

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: PS51063 HTH_CRP_2 ; PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDADKIVINKLREHSRLSGEDIAEIRDLTFMPRGLADQEDLIRQGDEPDKSVVVLSGWVA
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEEEECHHH
RYHLLPGGGRQYLSFHMAGDWPDAQALFLDRMDHAVCAIGPAVVSGIAHKELTRALVRRP
HEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ALGFAIWRETLIDAAIFREAITNNSARGKPARMAHLFCELFYRARTLGHVEGDQLLLPVS
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHH
LAQLGEALGMAIATVNRTLVELRASRAVDFRSGTMSVHNWQRLCAIGEFDPGYLHLKKQP
HHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCHHHHHHHHHCCCCCCCEEEECCCC
R
C
>Mature Secondary Structure
MDADKIVINKLREHSRLSGEDIAEIRDLTFMPRGLADQEDLIRQGDEPDKSVVVLSGWVA
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEEEECHHH
RYHLLPGGGRQYLSFHMAGDWPDAQALFLDRMDHAVCAIGPAVVSGIAHKELTRALVRRP
HEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ALGFAIWRETLIDAAIFREAITNNSARGKPARMAHLFCELFYRARTLGHVEGDQLLLPVS
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHH
LAQLGEALGMAIATVNRTLVELRASRAVDFRSGTMSVHNWQRLCAIGEFDPGYLHLKKQP
HHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCHHHHHHHHHCCCCCCCEEEECCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA