| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342381
Identifier: 146342381
GI number: 146342381
Start: 5721581
End: 5722306
Strand: Direct
Name: 146342381
Synonym: BRADO5538
Alternate gene names: NA
Gene position: 5721581-5722306 (Clockwise)
Preceding gene: 146342379
Following gene: 146342384
Centisome position: 76.73
GC content: 67.08
Gene sequence:
>726_bases ATGGATGCCGACAAGATCGTCATCAACAAGCTCAGGGAGCATTCCCGGCTTTCCGGCGAAGACATCGCCGAGATCAGAGA TCTCACCTTCATGCCGCGCGGGCTCGCCGATCAGGAGGACCTGATCCGGCAGGGCGACGAGCCCGACAAGTCCGTCGTCG TGCTCTCCGGCTGGGTGGCGCGCTATCATCTGCTGCCGGGCGGGGGCCGGCAATATCTCTCGTTCCACATGGCCGGCGAC TGGCCGGATGCGCAGGCGCTGTTCCTTGACCGCATGGATCATGCGGTGTGCGCGATCGGACCGGCCGTGGTCTCCGGCAT CGCGCACAAGGAGCTGACGCGGGCGCTCGTCCGGCGCCCGGCGCTCGGCTTTGCGATCTGGCGCGAGACGCTGATCGACG CGGCGATCTTCCGCGAGGCGATCACCAACAACAGCGCACGGGGCAAGCCGGCGCGCATGGCCCATCTGTTCTGCGAGCTG TTCTATCGCGCCCGCACGCTCGGCCATGTCGAGGGCGATCAGCTGCTGCTCCCGGTCAGCCTGGCGCAGCTCGGCGAGGC GTTGGGCATGGCGATCGCGACGGTGAATCGCACGCTGGTCGAGTTGCGCGCCAGCCGCGCGGTCGATTTCCGCAGCGGCA CGATGTCGGTGCACAACTGGCAACGGCTGTGCGCGATCGGCGAGTTCGATCCCGGCTATCTGCACCTGAAGAAGCAGCCG CGCTGA
Upstream 100 bases:
>100_bases GCGACATTCTCCGCATTTCCTGATACCAACGTCGACCTTAGTAGGAACCGTGGGCCGCGTGATCTCATTTGATACGTGAG AATCAACAGGCCCGATTTCC
Downstream 100 bases:
>100_bases GACGCGGCGTCAGATGCACAGGCCGATCAGCTTGATGTTGAGATGGCAGTCCTTGCTGGCGGGAGGCTTGGCGCCCCAGC GCGTCTGTGTCGTGGCCTCG
Product: CRP/FNR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator Crp/Fnr Family; Crp/Fnr Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Transcriptional Regulator; Crp/Fnr-Family Transcriptional Regulator; Crp-Fnr Family Transcriptional Regulator; Regulatory Protein Crp; Transcriptional Regulator Fnr-Type; Transcriptional Regulator Crp; Transcription Regulator Protein; Crp-Type Transcriptional Activatory Protein; Transcriptional Regulator Protein; Signal Transduction Histidine Kinase; Transcriptional Regulator Crp-Fnr Family
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MDADKIVINKLREHSRLSGEDIAEIRDLTFMPRGLADQEDLIRQGDEPDKSVVVLSGWVARYHLLPGGGRQYLSFHMAGD WPDAQALFLDRMDHAVCAIGPAVVSGIAHKELTRALVRRPALGFAIWRETLIDAAIFREAITNNSARGKPARMAHLFCEL FYRARTLGHVEGDQLLLPVSLAQLGEALGMAIATVNRTLVELRASRAVDFRSGTMSVHNWQRLCAIGEFDPGYLHLKKQP R
Sequences:
>Translated_241_residues MDADKIVINKLREHSRLSGEDIAEIRDLTFMPRGLADQEDLIRQGDEPDKSVVVLSGWVARYHLLPGGGRQYLSFHMAGD WPDAQALFLDRMDHAVCAIGPAVVSGIAHKELTRALVRRPALGFAIWRETLIDAAIFREAITNNSARGKPARMAHLFCEL FYRARTLGHVEGDQLLLPVSLAQLGEALGMAIATVNRTLVELRASRAVDFRSGTMSVHNWQRLCAIGEFDPGYLHLKKQP R >Mature_241_residues MDADKIVINKLREHSRLSGEDIAEIRDLTFMPRGLADQEDLIRQGDEPDKSVVVLSGWVARYHLLPGGGRQYLSFHMAGD WPDAQALFLDRMDHAVCAIGPAVVSGIAHKELTRALVRRPALGFAIWRETLIDAAIFREAITNNSARGKPARMAHLFCEL FYRARTLGHVEGDQLLLPVSLAQLGEALGMAIATVNRTLVELRASRAVDFRSGTMSVHNWQRLCAIGEFDPGYLHLKKQP R
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26859; Mature: 26859
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: PS51063 HTH_CRP_2 ; PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDADKIVINKLREHSRLSGEDIAEIRDLTFMPRGLADQEDLIRQGDEPDKSVVVLSGWVA CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEEEECHHH RYHLLPGGGRQYLSFHMAGDWPDAQALFLDRMDHAVCAIGPAVVSGIAHKELTRALVRRP HEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ALGFAIWRETLIDAAIFREAITNNSARGKPARMAHLFCELFYRARTLGHVEGDQLLLPVS CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHH LAQLGEALGMAIATVNRTLVELRASRAVDFRSGTMSVHNWQRLCAIGEFDPGYLHLKKQP HHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCHHHHHHHHHCCCCCCCEEEECCCC R C >Mature Secondary Structure MDADKIVINKLREHSRLSGEDIAEIRDLTFMPRGLADQEDLIRQGDEPDKSVVVLSGWVA CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEEEECHHH RYHLLPGGGRQYLSFHMAGDWPDAQALFLDRMDHAVCAIGPAVVSGIAHKELTRALVRRP HEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ALGFAIWRETLIDAAIFREAITNNSARGKPARMAHLFCELFYRARTLGHVEGDQLLLPVS CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHH LAQLGEALGMAIATVNRTLVELRASRAVDFRSGTMSVHNWQRLCAIGEFDPGYLHLKKQP HHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCHHHHHHHHHCCCCCCCEEEECCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA