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The map label for this gene is dctP [H]

Identifier: 146342370

GI number: 146342370

Start: 5711306

End: 5712322

Strand: Reverse

Name: dctP [H]

Synonym: BRADO5527

Alternate gene names: 146342370

Gene position: 5712322-5711306 (Counterclockwise)

Preceding gene: 146342371

Following gene: 146342369

Centisome position: 76.61

GC content: 63.23

Gene sequence:

>1017_bases
TTGCAGCCGTTCAAATTCCGTCACGTGATCGCCACCGCCGCCTCGCTGGCCGTGCTCGCGCTGGCCGGCCCGGCACTCGC
GGCCGATCCGATCGTCATCAAGTTCAGCCACGTGGTGGCCTCGAACACGCCGAAGGGCCTCGCCGCCGACAAGTTCAAGG
AACTCGCCGAGAAGTACACCGACGGCAAGGTGAAGGTCGAAGTCTATCCGAACTCGCAGCTCTACAAGGACAAGGAAGAG
CTTGAGGCGCTGCAGCTCGGCGCCGTCCAGATGCTGGCGCCGTCGAACTCGAAGTTCGGCCCGATCGGCATCAAGGAATT
CGAGGTGTTCGATCTGCCCTACATCCTGCCCGACCTCGCCACGCTGCGGAAGGTCACGGACGGCCCGCTCGGCGCCAAGC
TGCTCAAGCTGCTGGAGCCGAAAGGGATGATCGGGCTGGCCTATTGGGACAACGGCTTCAAGCAGATGAGCGCCAACAAG
AAGCTCGTCGATCCCGCCGACTACAAGGGCCTGAAATTCCGCATCCAGTCGTCCAAGGTGCTGGACGCCCAGTTCCGCAC
GCTCGGCGCCATCCCGCAGGTGATGGCGTTCTCCGAAGTCTACCAGGCGCTGCAGACCGGCGTCGTCGACGGCCAGGAAA
ACACGCCCTCGAACATCTACACCCAGAAGATGCACGAGGTGCAGAAGTACATCACGCTCACCAATCACGGCTATATCGGC
TACGTCGTGGTCGTGAACAAGAAGTTCTGGGACGGCCTGCCGCCGGACATCCGCGCCGCCTGCGACAAGGCGATGAAGGA
GGCCACCGAATACGGAAACGGCCAGTCCGCGAAGGAGAACGACGACGCGCTGGAGGAGATCCGCAAGTCCGGAAAGTCCG
AGCTCGTCAAGCTGACGCCGGCGCAGGACGAGGCGATGCGCAAGGCGATGATGCCGGTCTACAAGGACGTCGCCGGCCGC
GTCGGCCAGCCGCTGATCGACGAGTTCCTGAAGGAGACTCGCGGCACGACGAACTGA

Upstream 100 bases:

>100_bases
TAACGGTCAATGGCAATCCCGCCGTCGACCAGCTAACAATGTCCCTGGCATACAAAGCGGGGGCGTCATTGCAATGCCCC
CCGAACGTCGGGAGGACACC

Downstream 100 bases:

>100_bases
TGAATTGAGCGAGACAGGCGCGGGCCGGCGGCCCGCGCGGGGCAAGGCCTGGCAGGGCGCCAGGATAAGCAGACGGCGCA
GTCAAGCGTCGCGAACGTTT

Product: TRAP-Type C4-dicarboxylate transport system binding periplasmic subunit DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MQPFKFRHVIATAASLAVLALAGPALAADPIVIKFSHVVASNTPKGLAADKFKELAEKYTDGKVKVEVYPNSQLYKDKEE
LEALQLGAVQMLAPSNSKFGPIGIKEFEVFDLPYILPDLATLRKVTDGPLGAKLLKLLEPKGMIGLAYWDNGFKQMSANK
KLVDPADYKGLKFRIQSSKVLDAQFRTLGAIPQVMAFSEVYQALQTGVVDGQENTPSNIYTQKMHEVQKYITLTNHGYIG
YVVVVNKKFWDGLPPDIRAACDKAMKEATEYGNGQSAKENDDALEEIRKSGKSELVKLTPAQDEAMRKAMMPVYKDVAGR
VGQPLIDEFLKETRGTTN

Sequences:

>Translated_338_residues
MQPFKFRHVIATAASLAVLALAGPALAADPIVIKFSHVVASNTPKGLAADKFKELAEKYTDGKVKVEVYPNSQLYKDKEE
LEALQLGAVQMLAPSNSKFGPIGIKEFEVFDLPYILPDLATLRKVTDGPLGAKLLKLLEPKGMIGLAYWDNGFKQMSANK
KLVDPADYKGLKFRIQSSKVLDAQFRTLGAIPQVMAFSEVYQALQTGVVDGQENTPSNIYTQKMHEVQKYITLTNHGYIG
YVVVVNKKFWDGLPPDIRAACDKAMKEATEYGNGQSAKENDDALEEIRKSGKSELVKLTPAQDEAMRKAMMPVYKDVAGR
VGQPLIDEFLKETRGTTN
>Mature_338_residues
MQPFKFRHVIATAASLAVLALAGPALAADPIVIKFSHVVASNTPKGLAADKFKELAEKYTDGKVKVEVYPNSQLYKDKEE
LEALQLGAVQMLAPSNSKFGPIGIKEFEVFDLPYILPDLATLRKVTDGPLGAKLLKLLEPKGMIGLAYWDNGFKQMSANK
KLVDPADYKGLKFRIQSSKVLDAQFRTLGAIPQVMAFSEVYQALQTGVVDGQENTPSNIYTQKMHEVQKYITLTNHGYIG
YVVVVNKKFWDGLPPDIRAACDKAMKEATEYGNGQSAKENDDALEEIRKSGKSELVKLTPAQDEAMRKAMMPVYKDVAGR
VGQPLIDEFLKETRGTTN

Specific function: Binds C4-dicarboxylates; part of the binding-protein- dependent transport system for uptake of C4-dicarboxylates [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=288, Percent_Identity=30.9027777777778, Blast_Score=153, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 37261; Mature: 37261

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPFKFRHVIATAASLAVLALAGPALAADPIVIKFSHVVASNTPKGLAADKFKELAEKYT
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHHC
DGKVKVEVYPNSQLYKDKEELEALQLGAVQMLAPSNSKFGPIGIKEFEVFDLPYILPDLA
CCEEEEEECCCCHHHCCHHHHHHHHHCHHEEECCCCCCCCCCCCCEEEEECCCHHHHHHH
TLRKVTDGPLGAKLLKLLEPKGMIGLAYWDNGFKQMSANKKLVDPADYKGLKFRIQSSKV
HHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCEEEEECCCHH
LDAQFRTLGAIPQVMAFSEVYQALQTGVVDGQENTPSNIYTQKMHEVQKYITLTNHGYIG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCEEE
YVVVVNKKFWDGLPPDIRAACDKAMKEATEYGNGQSAKENDDALEEIRKSGKSELVKLTP
EEEEEECHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECC
AQDEAMRKAMMPVYKDVAGRVGQPLIDEFLKETRGTTN
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQPFKFRHVIATAASLAVLALAGPALAADPIVIKFSHVVASNTPKGLAADKFKELAEKYT
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHHC
DGKVKVEVYPNSQLYKDKEELEALQLGAVQMLAPSNSKFGPIGIKEFEVFDLPYILPDLA
CCEEEEEECCCCHHHCCHHHHHHHHHCHHEEECCCCCCCCCCCCCEEEEECCCHHHHHHH
TLRKVTDGPLGAKLLKLLEPKGMIGLAYWDNGFKQMSANKKLVDPADYKGLKFRIQSSKV
HHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCEEEEECCCHH
LDAQFRTLGAIPQVMAFSEVYQALQTGVVDGQENTPSNIYTQKMHEVQKYITLTNHGYIG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCEEE
YVVVVNKKFWDGLPPDIRAACDKAMKEATEYGNGQSAKENDDALEEIRKSGKSELVKLTP
EEEEEECHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEECC
AQDEAMRKAMMPVYKDVAGRVGQPLIDEFLKETRGTTN
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1809844 [H]