| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is livK [C]
Identifier: 146342357
GI number: 146342357
Start: 5695249
End: 5696472
Strand: Reverse
Name: livK [C]
Synonym: BRADO5513
Alternate gene names: 146342357
Gene position: 5696472-5695249 (Counterclockwise)
Preceding gene: 146342358
Following gene: 146342356
Centisome position: 76.4
GC content: 64.79
Gene sequence:
>1224_bases ATGACGTTGAGCTCGAAGTCACTGTCACGCCGCACCGTGCTCAAAAGCGGTGTCGCGCTCACCTCGATGCTGGCGGCGCC TGGCCTGCTGCGCGCCGAGCCGGCGCCGGTCAAGGTCGGCCTGCTGCAGCCGATCTCCGGCGCCTTCGCGCTCGACGGCG ATCTCGCCAAGATCGGCGCGGAGTTCGCGATCAAGGAGATCAACGACGCCGGCGGCATCAAGGCGCTGGGCGGCGCCAAG CTCGAGCTTATCGTCGGCGACAGCCGCTCGAACGCGGAGGCCGGCGCGCAGGCGACCGAGGAGTTGCAATCGGCCGGCGT GGCCGCCGTGCTCGGCGGCTTTGCCTCGGGCATTGCTCTGACCGCCACGCAAACCGCCTCCCGCTACGATCTGCCCTTCG TGGTCGACTGTGCGGTGGCGGATACGATCACCGAGCGCGGCCTCAAGAACACCTTCCGCTTCAATCCGAATTTCAGCATG GCGACCGCGGTCGCGCTGAAGAACCTCGTCAAGCTCAACGACGACGCCGGCAAGCCGATCAAGACGGTGGCGATCGTGCA CGAAGACGGCCTCTTCGGCTCGGGCCTCGCCAAGATCATGCAGGAGAAGCTGCCGCCGCTCGGCTTCCAGATCGTCGAGA CCATCGCGCATCCGACCCCGGCGCGCGACATGACCAACGTCGTGCTGCGGCTGCGCGCGCTCAATCCAGATCTGATCGTG CCGTCGCATTACTTCAACGAGTTCGTGCTGATGGCCCGCACTCTGCAGCAGCAGCGCGTGCGCCCGAAGGGCATTTACGC CGTGTTCGGCGGCGCGGCATCGAGCTATCGCTTCGTGAACGAGTTCCCCGAGGCTGCCCAGGGCGTGATGGACTGCAACC ATTGGGGTGATCCGAAGAGCCCGATCACGGCCAAGCTGCGCGAGACCGTGACCGCTGCCGGCAAGTTCTACGCCTACAAT ACGCCGATCAACTATTCGCTGGTGAAGGTGTTCGCTCAGGCTGTCGAGAATGCCGGCAGCGCCGATCGTGCCAAGATCAT CGAGGCGCTGGCAGCGAACGAATTCGACAGCGGCGTCATGCCCTATGGCAAGACCAAGTTCGACGCCAAAGGCCAGAACA CCAGCGCACTGCCGCTGAACACGCAGGTGCAAGGCAAGGACATCAAAGTGATCTACCCGGCGGACTACGCCGACGCAAAG CCGGTGTTCCCGATCAACGGGTGA
Upstream 100 bases:
>100_bases GGACGGGCGACGAAGGGCACCGGCACTGGAGCCCGACCGCCGAGGTGTACCGCAGGGAGCGCCCGCGCCGGCGGCCGCCA GTCAGGAAAGTGGGGAAGTC
Downstream 100 bases:
>100_bases TCGGGGGGCACGACTCCCGCTTCGGTAAAAAAGCCGTGGCGATTGCGGTAGACTTGGCCATCCGTCGAGACGCCCGGCCT CGCCGGGCTCCTCAGGATCA
Product: putative leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MTLSSKSLSRRTVLKSGVALTSMLAAPGLLRAEPAPVKVGLLQPISGAFALDGDLAKIGAEFAIKEINDAGGIKALGGAK LELIVGDSRSNAEAGAQATEELQSAGVAAVLGGFASGIALTATQTASRYDLPFVVDCAVADTITERGLKNTFRFNPNFSM ATAVALKNLVKLNDDAGKPIKTVAIVHEDGLFGSGLAKIMQEKLPPLGFQIVETIAHPTPARDMTNVVLRLRALNPDLIV PSHYFNEFVLMARTLQQQRVRPKGIYAVFGGAASSYRFVNEFPEAAQGVMDCNHWGDPKSPITAKLRETVTAAGKFYAYN TPINYSLVKVFAQAVENAGSADRAKIIEALAANEFDSGVMPYGKTKFDAKGQNTSALPLNTQVQGKDIKVIYPADYADAK PVFPING
Sequences:
>Translated_407_residues MTLSSKSLSRRTVLKSGVALTSMLAAPGLLRAEPAPVKVGLLQPISGAFALDGDLAKIGAEFAIKEINDAGGIKALGGAK LELIVGDSRSNAEAGAQATEELQSAGVAAVLGGFASGIALTATQTASRYDLPFVVDCAVADTITERGLKNTFRFNPNFSM ATAVALKNLVKLNDDAGKPIKTVAIVHEDGLFGSGLAKIMQEKLPPLGFQIVETIAHPTPARDMTNVVLRLRALNPDLIV PSHYFNEFVLMARTLQQQRVRPKGIYAVFGGAASSYRFVNEFPEAAQGVMDCNHWGDPKSPITAKLRETVTAAGKFYAYN TPINYSLVKVFAQAVENAGSADRAKIIEALAANEFDSGVMPYGKTKFDAKGQNTSALPLNTQVQGKDIKVIYPADYADAK PVFPING >Mature_406_residues TLSSKSLSRRTVLKSGVALTSMLAAPGLLRAEPAPVKVGLLQPISGAFALDGDLAKIGAEFAIKEINDAGGIKALGGAKL ELIVGDSRSNAEAGAQATEELQSAGVAAVLGGFASGIALTATQTASRYDLPFVVDCAVADTITERGLKNTFRFNPNFSMA TAVALKNLVKLNDDAGKPIKTVAIVHEDGLFGSGLAKIMQEKLPPLGFQIVETIAHPTPARDMTNVVLRLRALNPDLIVP SHYFNEFVLMARTLQQQRVRPKGIYAVFGGAASSYRFVNEFPEAAQGVMDCNHWGDPKSPITAKLRETVTAAGKFYAYNT PINYSLVKVFAQAVENAGSADRAKIIEALAANEFDSGVMPYGKTKFDAKGQNTSALPLNTQVQGKDIKVIYPADYADAKP VFPING
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=341, Percent_Identity=24.9266862170088, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI48994941, Length=256, Percent_Identity=26.171875, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 43143; Mature: 43012
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSSKSLSRRTVLKSGVALTSMLAAPGLLRAEPAPVKVGLLQPISGAFALDGDLAKIGA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEECCCHHHHHH EFAIKEINDAGGIKALGGAKLELIVGDSRSNAEAGAQATEELQSAGVAAVLGGFASGIAL HHHHHHHCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCEEE TATQTASRYDLPFVVDCAVADTITERGLKNTFRFNPNFSMATAVALKNLVKLNDDAGKPI EEECCCCCCCCCEEEEHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCE KTVAIVHEDGLFGSGLAKIMQEKLPPLGFQIVETIAHPTPARDMTNVVLRLRALNPDLIV EEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHEECCCCEEC PSHYFNEFVLMARTLQQQRVRPKGIYAVFGGAASSYRFVNEFPEAAQGVMDCNHWGDPKS CHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC PITAKLRETVTAAGKFYAYNTPINYSLVKVFAQAVENAGSADRAKIIEALAANEFDSGVM CHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC PYGKTKFDAKGQNTSALPLNTQVQGKDIKVIYPADYADAKPVFPING CCCCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure TLSSKSLSRRTVLKSGVALTSMLAAPGLLRAEPAPVKVGLLQPISGAFALDGDLAKIGA CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEECCCHHHHHH EFAIKEINDAGGIKALGGAKLELIVGDSRSNAEAGAQATEELQSAGVAAVLGGFASGIAL HHHHHHHCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCEEE TATQTASRYDLPFVVDCAVADTITERGLKNTFRFNPNFSMATAVALKNLVKLNDDAGKPI EEECCCCCCCCCEEEEHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCE KTVAIVHEDGLFGSGLAKIMQEKLPPLGFQIVETIAHPTPARDMTNVVLRLRALNPDLIV EEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHEECCCCEEC PSHYFNEFVLMARTLQQQRVRPKGIYAVFGGAASSYRFVNEFPEAAQGVMDCNHWGDPKS CHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC PITAKLRETVTAAGKFYAYNTPINYSLVKVFAQAVENAGSADRAKIIEALAANEFDSGVM CHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC PYGKTKFDAKGQNTSALPLNTQVQGKDIKVIYPADYADAKPVFPING CCCCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA