| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is hyuB
Identifier: 146342351
GI number: 146342351
Start: 5689077
End: 5690810
Strand: Reverse
Name: hyuB
Synonym: BRADO5507
Alternate gene names: NA
Gene position: 5690810-5689077 (Counterclockwise)
Preceding gene: 146342352
Following gene: 146342350
Centisome position: 76.32
GC content: 67.07
Gene sequence:
>1734_bases ATGACCAACATGGATCCGATCACGCTCGCGGTGCTGAAGGGGCGGCTGGAGCAGATCGCCGACGAAATGGATGCGACGTT GTACCGCTCCGCGTTCAACCCGACGATCGCGGAGGCGCGCGACGCCTGCCACGGCATCTATCACGCGACGACCGGCGACA CGCTGGTGCAGGGGCAGGGCGGTCTGCCGATCTTCGTCGGCGCGATGGCTTTCGCCGTGCGCGCCGTCATCGCCAAGGTC GAGAAGGAGGGCGGGCTCGAGGAGGGCGACACCTTTATCTTCAACGATCCCTATGACGGCGGCACCCATCTTAACGATTT CCGCCTGGTGCGACCGGTGTTCCGCGACAACAGGGTGTTCTGCTGGATTGCCTCGGTCGGCCACTGGCTCGACATTGGCG GCAACGTCGCCGGCGGCTACAATCCGAAGGCGGTCGAGAGTTTTCAGGAAGGCATGCGTATCCCGCCGGTCAAGCTGATC GCGGCGGGACGCATGAACCACGACATCCTCGGCATCATCGAAGCCAATTCGCGCGTGCCGATGTCGAACTGGGGCGACCT CAACGGCCAGCTCAACGCGCTCGATCTCGGCGAGATCAGACTGCGCGCGCTGCTCGACGATTACGGCGACAAAACCGTCT CCAATGCGTTCGAGGCGTTCTCTGATCGCGCCGAGACCCTGATGCGGGCGGCGATCGCCTCACTGCCGGACGGCACCTAT TCATTCGAGGACGTGCTCGACAATGACGGCATCGTCGACGAACCGCTGACCGTCGCGCTCGATGTCACCATTGCCGGCGA CACGCTGACGCTCGATTTCACCCGCTCGTCGGCGGCCTGCAAGGGCCCGATCAACATCTCGCGCTCGACCACGATCGCGG CCTGCTACGTCGCGCTGAAGCATGTGTTCACCGAGGTGCCGGCCAATGCCGGCTGCCTGCGGCCGATCTCGTTCGACATC ACCGACGGCTCGCTGCTGGCGGCCGGGCCGCCGAAGCCGGTCGCGGGCTATACCGAGACCATCCTGCGCCTGATCGGCGT CGTGCTCGGCGCGCTCGCCAAGGCCGATCCGTCGCGCGCCACCGCCGCGCCGTTCGGCACCATCAATGCGCTGTCGATCG CGGGCCATCGCAAGGACAACAGCCGCTTCGTGATGTTCTCGTTCTTCGGCGGCGGCCTCGGCGGCAATCCCGCGACCGAC GGCCTCAACCACGCCAACAACCCGATCTCGACCGCGACCATTCCGCCCGTGGAAATCTTGGAAGCAGCCTATCCCGTCAT GTTCACGCAATGGGCGTTGCGCCCGGATTCCGCCGGTGCCGGCACCCATCGCGGCGGCGTCGGCGCTGTCTATGAGGTCG AACTGCTGGCCGATGCCGATGTCGCGCTGCTCGGCGAGCGCGGCAAAGCGGCGCCGTTCGGCGTCGCCGGCGGCGGCAGC GCCGCGCTCAATCATTTCGCCTGGCAGACGGAGCAGGGCGAGGCGAGCCCGCCGATGGTGTCCAAGATCACCGACCTGCA TTTGAAGGCCGGCAAGCGCGTGCGGCTGGAGACACCCGGAGGCGGCGGCTGGGGTCCGCCGGAGGCGCGGCCCGTTGCTG AGGTCGCGCACGACGTCGCGCTCGGCTTCGTCTCGGCGGCGCAGGCGCGTGACGTCTACAAGGTTGCCGTGAAGGCAGAC GGCGCGGTCGATGAAGCCGCGACGCACACGCTCCGTGCGGGAGGTGCGGCATGA
Upstream 100 bases:
>100_bases ACCGCATGCTCGATTTCGCCGGTCTCAACGCGATGCTCGGCACCGCCGATATCCTGGCGAACGGTGCCCGTTACGCAGCA GATGACGAGGGAACGCGGGC
Downstream 100 bases:
>100_bases GCAAGCTCGGCACCATCGTCGGCGTCGATGTCGGCGGCACCTTCACGGACCTGTTCTACTTCGACGAGGCGAAGCGCAGC TTCCGCACCAACAAGGTGCC
Product: N-methylhydantoinase B
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 577; Mature: 576
Protein sequence:
>577_residues MTNMDPITLAVLKGRLEQIADEMDATLYRSAFNPTIAEARDACHGIYHATTGDTLVQGQGGLPIFVGAMAFAVRAVIAKV EKEGGLEEGDTFIFNDPYDGGTHLNDFRLVRPVFRDNRVFCWIASVGHWLDIGGNVAGGYNPKAVESFQEGMRIPPVKLI AAGRMNHDILGIIEANSRVPMSNWGDLNGQLNALDLGEIRLRALLDDYGDKTVSNAFEAFSDRAETLMRAAIASLPDGTY SFEDVLDNDGIVDEPLTVALDVTIAGDTLTLDFTRSSAACKGPINISRSTTIAACYVALKHVFTEVPANAGCLRPISFDI TDGSLLAAGPPKPVAGYTETILRLIGVVLGALAKADPSRATAAPFGTINALSIAGHRKDNSRFVMFSFFGGGLGGNPATD GLNHANNPISTATIPPVEILEAAYPVMFTQWALRPDSAGAGTHRGGVGAVYEVELLADADVALLGERGKAAPFGVAGGGS AALNHFAWQTEQGEASPPMVSKITDLHLKAGKRVRLETPGGGGWGPPEARPVAEVAHDVALGFVSAAQARDVYKVAVKAD GAVDEAATHTLRAGGAA
Sequences:
>Translated_577_residues MTNMDPITLAVLKGRLEQIADEMDATLYRSAFNPTIAEARDACHGIYHATTGDTLVQGQGGLPIFVGAMAFAVRAVIAKV EKEGGLEEGDTFIFNDPYDGGTHLNDFRLVRPVFRDNRVFCWIASVGHWLDIGGNVAGGYNPKAVESFQEGMRIPPVKLI AAGRMNHDILGIIEANSRVPMSNWGDLNGQLNALDLGEIRLRALLDDYGDKTVSNAFEAFSDRAETLMRAAIASLPDGTY SFEDVLDNDGIVDEPLTVALDVTIAGDTLTLDFTRSSAACKGPINISRSTTIAACYVALKHVFTEVPANAGCLRPISFDI TDGSLLAAGPPKPVAGYTETILRLIGVVLGALAKADPSRATAAPFGTINALSIAGHRKDNSRFVMFSFFGGGLGGNPATD GLNHANNPISTATIPPVEILEAAYPVMFTQWALRPDSAGAGTHRGGVGAVYEVELLADADVALLGERGKAAPFGVAGGGS AALNHFAWQTEQGEASPPMVSKITDLHLKAGKRVRLETPGGGGWGPPEARPVAEVAHDVALGFVSAAQARDVYKVAVKAD GAVDEAATHTLRAGGAA >Mature_576_residues TNMDPITLAVLKGRLEQIADEMDATLYRSAFNPTIAEARDACHGIYHATTGDTLVQGQGGLPIFVGAMAFAVRAVIAKVE KEGGLEEGDTFIFNDPYDGGTHLNDFRLVRPVFRDNRVFCWIASVGHWLDIGGNVAGGYNPKAVESFQEGMRIPPVKLIA AGRMNHDILGIIEANSRVPMSNWGDLNGQLNALDLGEIRLRALLDDYGDKTVSNAFEAFSDRAETLMRAAIASLPDGTYS FEDVLDNDGIVDEPLTVALDVTIAGDTLTLDFTRSSAACKGPINISRSTTIAACYVALKHVFTEVPANAGCLRPISFDIT DGSLLAAGPPKPVAGYTETILRLIGVVLGALAKADPSRATAAPFGTINALSIAGHRKDNSRFVMFSFFGGGLGGNPATDG LNHANNPISTATIPPVEILEAAYPVMFTQWALRPDSAGAGTHRGGVGAVYEVELLADADVALLGERGKAAPFGVAGGGSA ALNHFAWQTEQGEASPPMVSKITDLHLKAGKRVRLETPGGGGWGPPEARPVAEVAHDVALGFVSAAQARDVYKVAVKADG AVDEAATHTLRAGGAA
Specific function: Unknown
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=551, Percent_Identity=28.6751361161525, Blast_Score=159, Evalue=6e-39, Organism=Caenorhabditis elegans, GI133901900, Length=551, Percent_Identity=29.4010889292196, Blast_Score=182, Evalue=5e-46, Organism=Caenorhabditis elegans, GI133901902, Length=491, Percent_Identity=29.3279022403259, Blast_Score=157, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6322634, Length=554, Percent_Identity=25.9927797833935, Blast_Score=152, Evalue=1e-37, Organism=Drosophila melanogaster, GI45550492, Length=546, Percent_Identity=28.021978021978, Blast_Score=152, Evalue=9e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: 3.5.2.14
Molecular weight: Translated: 60569; Mature: 60438
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNMDPITLAVLKGRLEQIADEMDATLYRSAFNPTIAEARDACHGIYHATTGDTLVQGQG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCEEEECCC GLPIFVGAMAFAVRAVIAKVEKEGGLEEGDTFIFNDPYDGGTHLNDFRLVRPVFRDNRVF CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEE CWIASVGHWLDIGGNVAGGYNPKAVESFQEGMRIPPVKLIAAGRMNHDILGIIEANSRVP EEEECCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCC MSNWGDLNGQLNALDLGEIRLRALLDDYGDKTVSNAFEAFSDRAETLMRAAIASLPDGTY CCCCCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SFEDVLDNDGIVDEPLTVALDVTIAGDTLTLDFTRSSAACKGPINISRSTTIAACYVALK CHHHHHCCCCCCCCCEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH HVFTEVPANAGCLRPISFDITDGSLLAAGPPKPVAGYTETILRLIGVVLGALAKADPSRA HHHHHCCCCCCCCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC TAAPFGTINALSIAGHRKDNSRFVMFSFFGGGLGGNPATDGLNHANNPISTATIPPVEIL CCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH EAAYPVMFTQWALRPDSAGAGTHRGGVGAVYEVELLADADVALLGERGKAAPFGVAGGGS HHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCCCCCH AALNHFAWQTEQGEASPPMVSKITDLHLKAGKRVRLETPGGGGWGPPEARPVAEVAHDVA HHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH LGFVSAAQARDVYKVAVKADGAVDEAATHTLRAGGAA HHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCCCC >Mature Secondary Structure TNMDPITLAVLKGRLEQIADEMDATLYRSAFNPTIAEARDACHGIYHATTGDTLVQGQG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCEEEECCC GLPIFVGAMAFAVRAVIAKVEKEGGLEEGDTFIFNDPYDGGTHLNDFRLVRPVFRDNRVF CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEE CWIASVGHWLDIGGNVAGGYNPKAVESFQEGMRIPPVKLIAAGRMNHDILGIIEANSRVP EEEECCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCC MSNWGDLNGQLNALDLGEIRLRALLDDYGDKTVSNAFEAFSDRAETLMRAAIASLPDGTY CCCCCCCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SFEDVLDNDGIVDEPLTVALDVTIAGDTLTLDFTRSSAACKGPINISRSTTIAACYVALK CHHHHHCCCCCCCCCEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH HVFTEVPANAGCLRPISFDITDGSLLAAGPPKPVAGYTETILRLIGVVLGALAKADPSRA HHHHHCCCCCCCCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC TAAPFGTINALSIAGHRKDNSRFVMFSFFGGGLGGNPATDGLNHANNPISTATIPPVEIL CCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH EAAYPVMFTQWALRPDSAGAGTHRGGVGAVYEVELLADADVALLGERGKAAPFGVAGGGS HHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCCCCCH AALNHFAWQTEQGEASPPMVSKITDLHLKAGKRVRLETPGGGGWGPPEARPVAEVAHDVA HHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH LGFVSAAQARDVYKVAVKADGAVDEAATHTLRAGGAA HHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]