| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is hyuA [H]
Identifier: 146342350
GI number: 146342350
Start: 5687020
End: 5689080
Strand: Reverse
Name: hyuA [H]
Synonym: BRADO5506
Alternate gene names: 146342350
Gene position: 5689080-5687020 (Counterclockwise)
Preceding gene: 146342351
Following gene: 146342349
Centisome position: 76.3
GC content: 69.09
Gene sequence:
>2061_bases ATGAGCAAGCTCGGCACCATCGTCGGCGTCGATGTCGGCGGCACCTTCACGGACCTGTTCTACTTCGACGAGGCGAAGCG CAGCTTCCGCACCAACAAGGTGCCGTCGAACCGCGGCGACGAAGCGGTCGGCTTCCTCGAAGGCCTGCAAGGTTTCGGCG CGGTCTCGCATCTCACCTCGATCGTGCACGGCACGACCGTCGGCACCAATGCGCTGTTGGAGCGCAAGGGCGCGCGCATC GGCCTGATCACGACGCGTGGCTTCCGCGACGTGCTGGAGATGCGCCGCCGCGACCGCCGCAACACCTGGGGCCTGTGGGG CGACTTCGTGCCCGTCGTCGAGCGCGACATGCGCGCCGAGGTCGACGAGCGCGTGCTGTCGGACGGCACCATCCGCACGG CCGTTGACGTTGCGCAGGTCGAGACGACCGCGCGCGAGCTGTTGGCAAAGGGCGCGCAGGCGCTGGCGATCGTGTTCGTC AACGCCTTCGCCAATCCCGACAACGAGCGCCGCGCGCTCGAAGCCGTGCAGGCGATCTGGCCGAACGACAATGTCGCCTG CTCCAGCCAGATCCTGCCGGAGATCCGCGAGTTCGAGCGGACCTCGACGACCGCGCTCAACGCCTATCTGCAGCCGGTGG TCGGCTCCTATTTGCAGAAGCTGCAGAACGCGCTGGCGGGTGAAGCGTTCGACGGCCGCTTCCACATCGTGCAGTCCAAT GGCGGCGTGATGTCCACGGACGCGGCGCGGCGCTTCCCGATCCGCACCGCGCTGTCGGGCCCGGCGGCTGGCGTGATCGC CGCGGCGGAGATCGCCAAGGCGGCCGGCTTTCCCAACGTCATCACCGGCGATCTCGGCGGCACCTCGTTCGACGTGTCGC TGGTGGTCGACGGCGCGACCTCGCTGGCGGCGCAGACCACGATCGATTTCGGCCTCGTCGTGCGCACGCCGATGATCGAG ATCACCACCATCGGCGCCGGCGGCGGCTCGATCGCTCATGTCGATGCCGGCGGCCTGCTGCAGGTCGGCCCGGAGAGCGC CGGCTCGCGTCCGGGTCCGGTGTGCTATGGCGGCGGCAACGACCGGCCGACGCTCACTGACGCCAACGTCGTGCTCGGCC GCATCAATGCTGACAGGCCGATCGGCGGCAAGCTCAAGGCGCTCGATGTCGAGGCCGCCAAGCGCGCCATCGCCAAGCAT GTCGGCGAGCCGCTGGGTCTCGGCGTGATGGAGGCGGCGGAAGCCATCGTGCGCATCGCCGACAGCAAGATGGCCGGGGC CATCCGGCTGATGTCGATCGAGCGCGGCCATGATCCGGCGCGCTTCGCGGCGGTGCCGTTCGGCGGCGGCGGCGCGCTGC ACGTCTCGGCGCTGATCAAGGATGTCGGGCTCAAGGCCGCGCTGGTGCCGCGCTATCCCGGCGTCACCTCGGCGCTCGGC TGCGTCATCGCCGACATCCGCCATGACCAGGTGCAGACGCTCAACATGTTCGTCGACGGCCTCGACATCGCGGCGCTGAT CCGGTGGATGCTGTCCGAGGCCGAGCATGCCCAGGGCGTGGTGAAGGACGCACGGCTCGCGGTCGAGCGTATCGACACGC TGTTCGAGCTCGACATGCACTATGTCGGCCAGACCCACACCATCCGCGCGACCGTGCCGGCCGAGATCCGCGACGGTGCC ATTGCGCTGACCGTGGAGGACGTGCGCAAGGCGTTCGAGACCGCCTATCAGAAGAGCTTCAGCCGGCTGTTGCCGGGCGT GCCGATCAAGATCGTGAATCTGCGTACGGCGGCGATCGGCGTGCGGCCGCGCTTTGACCTCTCGGCCCTCGCGCCCGATG CCGGCGCCGATTTGATGACCGCGCGGCTCGGCAGCCGCGACGTCTGGTTCGACGGCAAATGGTGGAGCACGGCGATCTAC GCCCGGCTCGGTCTTCCGGTCGGCAGCGACATCGCCGGGCCCGCGATCCTGGAGCAGCCGGACGCGACCACGGTGATCGC ACCCGGCTTCAAGGCGCGGGTCGACCAGTTCGGCAACGTCATCGTGGAGCGCAGCGCATGA
Upstream 100 bases:
>100_bases TCTCGGCGGCGCAGGCGCGTGACGTCTACAAGGTTGCCGTGAAGGCAGACGGCGCGGTCGATGAAGCCGCGACGCACACG CTCCGTGCGGGAGGTGCGGC
Downstream 100 bases:
>100_bases GTGATCACAAGGTGTCGGCCGCGCAGAGCGCGCTGCTGATCGTCGATCTCCAGAACGATTTCCTCGATCCGAATGGCGCG TATGGCCGTGCGGGACAGAC
Product: N-methylhydantoinase A
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 686; Mature: 685
Protein sequence:
>686_residues MSKLGTIVGVDVGGTFTDLFYFDEAKRSFRTNKVPSNRGDEAVGFLEGLQGFGAVSHLTSIVHGTTVGTNALLERKGARI GLITTRGFRDVLEMRRRDRRNTWGLWGDFVPVVERDMRAEVDERVLSDGTIRTAVDVAQVETTARELLAKGAQALAIVFV NAFANPDNERRALEAVQAIWPNDNVACSSQILPEIREFERTSTTALNAYLQPVVGSYLQKLQNALAGEAFDGRFHIVQSN GGVMSTDAARRFPIRTALSGPAAGVIAAAEIAKAAGFPNVITGDLGGTSFDVSLVVDGATSLAAQTTIDFGLVVRTPMIE ITTIGAGGGSIAHVDAGGLLQVGPESAGSRPGPVCYGGGNDRPTLTDANVVLGRINADRPIGGKLKALDVEAAKRAIAKH VGEPLGLGVMEAAEAIVRIADSKMAGAIRLMSIERGHDPARFAAVPFGGGGALHVSALIKDVGLKAALVPRYPGVTSALG CVIADIRHDQVQTLNMFVDGLDIAALIRWMLSEAEHAQGVVKDARLAVERIDTLFELDMHYVGQTHTIRATVPAEIRDGA IALTVEDVRKAFETAYQKSFSRLLPGVPIKIVNLRTAAIGVRPRFDLSALAPDAGADLMTARLGSRDVWFDGKWWSTAIY ARLGLPVGSDIAGPAILEQPDATTVIAPGFKARVDQFGNVIVERSA
Sequences:
>Translated_686_residues MSKLGTIVGVDVGGTFTDLFYFDEAKRSFRTNKVPSNRGDEAVGFLEGLQGFGAVSHLTSIVHGTTVGTNALLERKGARI GLITTRGFRDVLEMRRRDRRNTWGLWGDFVPVVERDMRAEVDERVLSDGTIRTAVDVAQVETTARELLAKGAQALAIVFV NAFANPDNERRALEAVQAIWPNDNVACSSQILPEIREFERTSTTALNAYLQPVVGSYLQKLQNALAGEAFDGRFHIVQSN GGVMSTDAARRFPIRTALSGPAAGVIAAAEIAKAAGFPNVITGDLGGTSFDVSLVVDGATSLAAQTTIDFGLVVRTPMIE ITTIGAGGGSIAHVDAGGLLQVGPESAGSRPGPVCYGGGNDRPTLTDANVVLGRINADRPIGGKLKALDVEAAKRAIAKH VGEPLGLGVMEAAEAIVRIADSKMAGAIRLMSIERGHDPARFAAVPFGGGGALHVSALIKDVGLKAALVPRYPGVTSALG CVIADIRHDQVQTLNMFVDGLDIAALIRWMLSEAEHAQGVVKDARLAVERIDTLFELDMHYVGQTHTIRATVPAEIRDGA IALTVEDVRKAFETAYQKSFSRLLPGVPIKIVNLRTAAIGVRPRFDLSALAPDAGADLMTARLGSRDVWFDGKWWSTAIY ARLGLPVGSDIAGPAILEQPDATTVIAPGFKARVDQFGNVIVERSA >Mature_685_residues SKLGTIVGVDVGGTFTDLFYFDEAKRSFRTNKVPSNRGDEAVGFLEGLQGFGAVSHLTSIVHGTTVGTNALLERKGARIG LITTRGFRDVLEMRRRDRRNTWGLWGDFVPVVERDMRAEVDERVLSDGTIRTAVDVAQVETTARELLAKGAQALAIVFVN AFANPDNERRALEAVQAIWPNDNVACSSQILPEIREFERTSTTALNAYLQPVVGSYLQKLQNALAGEAFDGRFHIVQSNG GVMSTDAARRFPIRTALSGPAAGVIAAAEIAKAAGFPNVITGDLGGTSFDVSLVVDGATSLAAQTTIDFGLVVRTPMIEI TTIGAGGGSIAHVDAGGLLQVGPESAGSRPGPVCYGGGNDRPTLTDANVVLGRINADRPIGGKLKALDVEAAKRAIAKHV GEPLGLGVMEAAEAIVRIADSKMAGAIRLMSIERGHDPARFAAVPFGGGGALHVSALIKDVGLKAALVPRYPGVTSALGC VIADIRHDQVQTLNMFVDGLDIAALIRWMLSEAEHAQGVVKDARLAVERIDTLFELDMHYVGQTHTIRATVPAEIRDGAI ALTVEDVRKAFETAYQKSFSRLLPGVPIKIVNLRTAAIGVRPRFDLSALAPDAGADLMTARLGSRDVWFDGKWWSTAIYA RLGLPVGSDIAGPAILEQPDATTVIAPGFKARVDQFGNVIVERSA
Specific function: HyuA and hyuB convert D- and L-substituted hydantoins to corresponding N-carbamyl-amino acids [H]
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=729, Percent_Identity=29.7668038408779, Blast_Score=221, Evalue=2e-57, Organism=Caenorhabditis elegans, GI133901900, Length=721, Percent_Identity=27.877947295423, Blast_Score=197, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6322634, Length=671, Percent_Identity=28.4649776453055, Blast_Score=211, Evalue=3e-55, Organism=Drosophila melanogaster, GI45550492, Length=745, Percent_Identity=28.4563758389262, Blast_Score=203, Evalue=4e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: 3.5.2.14
Molecular weight: Translated: 72790; Mature: 72659
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLGTIVGVDVGGTFTDLFYFDEAKRSFRTNKVPSNRGDEAVGFLEGLQGFGAVSHLTS CCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHH IVHGTTVGTNALLERKGARIGLITTRGFRDVLEMRRRDRRNTWGLWGDFVPVVERDMRAE HHHCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH VDERVLSDGTIRTAVDVAQVETTARELLAKGAQALAIVFVNAFANPDNERRALEAVQAIW HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHCCCCHHHHHHHHHHHHC PNDNVACSSQILPEIREFERTSTTALNAYLQPVVGSYLQKLQNALAGEAFDGRFHIVQSN CCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC GGVMSTDAARRFPIRTALSGPAAGVIAAAEIAKAAGFPNVITGDLGGTSFDVSLVVDGAT CCEEECCCHHCCCCHHHCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEEECCCH SLAAQTTIDFGLVVRTPMIEITTIGAGGGSIAHVDAGGLLQVGPESAGSRPGPVCYGGGN HHHHHHHHCEEEEEECCEEEEEEEECCCCCEEEECCCCEEEECCCCCCCCCCCEEECCCC DRPTLTDANVVLGRINADRPIGGKLKALDVEAAKRAIAKHVGEPLGLGVMEAAEAIVRIA CCCCEEECCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH DSKMAGAIRLMSIERGHDPARFAAVPFGGGGALHVSALIKDVGLKAALVPRYPGVTSALG CCHHCCEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCHHHHHH CVIADIRHDQVQTLNMFVDGLDIAALIRWMLSEAEHAQGVVKDARLAVERIDTLFELDMH HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVGQTHTIRATVPAEIRDGAIALTVEDVRKAFETAYQKSFSRLLPGVPIKIVNLRTAAIG HCCCCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEE VRPRFDLSALAPDAGADLMTARLGSRDVWFDGKWWSTAIYARLGLPVGSDIAGPAILEQP CCCCCCHHHCCCCCCCHHHHHHCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCC DATTVIAPGFKARVDQFGNVIVERSA CCCEEECCCHHHHHHHHCCEEEECCC >Mature Secondary Structure SKLGTIVGVDVGGTFTDLFYFDEAKRSFRTNKVPSNRGDEAVGFLEGLQGFGAVSHLTS CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHH IVHGTTVGTNALLERKGARIGLITTRGFRDVLEMRRRDRRNTWGLWGDFVPVVERDMRAE HHHCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH VDERVLSDGTIRTAVDVAQVETTARELLAKGAQALAIVFVNAFANPDNERRALEAVQAIW HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHCCCCHHHHHHHHHHHHC PNDNVACSSQILPEIREFERTSTTALNAYLQPVVGSYLQKLQNALAGEAFDGRFHIVQSN CCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC GGVMSTDAARRFPIRTALSGPAAGVIAAAEIAKAAGFPNVITGDLGGTSFDVSLVVDGAT CCEEECCCHHCCCCHHHCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEEECCCH SLAAQTTIDFGLVVRTPMIEITTIGAGGGSIAHVDAGGLLQVGPESAGSRPGPVCYGGGN HHHHHHHHCEEEEEECCEEEEEEEECCCCCEEEECCCCEEEECCCCCCCCCCCEEECCCC DRPTLTDANVVLGRINADRPIGGKLKALDVEAAKRAIAKHVGEPLGLGVMEAAEAIVRIA CCCCEEECCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH DSKMAGAIRLMSIERGHDPARFAAVPFGGGGALHVSALIKDVGLKAALVPRYPGVTSALG CCHHCCEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCHHHHHH CVIADIRHDQVQTLNMFVDGLDIAALIRWMLSEAEHAQGVVKDARLAVERIDTLFELDMH HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVGQTHTIRATVPAEIRDGAIALTVEDVRKAFETAYQKSFSRLLPGVPIKIVNLRTAAIG HCCCCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEE VRPRFDLSALAPDAGADLMTARLGSRDVWFDGKWWSTAIYARLGLPVGSDIAGPAILEQP CCCCCCHHHCCCCCCCHHHHHHCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCC DATTVIAPGFKARVDQFGNVIVERSA CCCEEECCCHHHHHHHHCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732229 [H]