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The map label for this gene is ssuC [H]

Identifier: 146342347

GI number: 146342347

Start: 5684264

End: 5685031

Strand: Direct

Name: ssuC [H]

Synonym: BRADO5503

Alternate gene names: 146342347

Gene position: 5684264-5685031 (Clockwise)

Preceding gene: 146342346

Following gene: 146342359

Centisome position: 76.23

GC content: 69.53

Gene sequence:

>768_bases
ATGAGATGGTCCGTGATCGCGTGGCGTGTTGCCAGCTTCGCCGTTGCCGCAGGCTTCATCGCGGCCTGGCAGCTTGCCGC
CGATCGGCGCCTGGTCTCGCCCGTGTTCCTGCCGGGGCCCGATCGCGCCTGGGCATCGCTGCTGCGCGGCTTCACGAGCG
GCGATCTGCTGACGAAGCTCGCGGGCACGCTGGCGCACATGGCCTATGGCTGGCTGCTCGCCTCGATCGTCGGCATCGCG
CTCGGCGCGATGATCGGCTCCTCCAAGGCGATGCGCAGCTACGTCGCGCCGACGCTCGAGCTGCTGCGGCCGCTGCCGGT
CTCGGCGATCATTCCGGTCGCGATCGCCGCGCTTGGCCTGAGCCAAAGCATGGCGCTGTTCGTGATCGCGTTCGGCTCGC
TGTGGCCAATGCTGCTCGGGACCATCCACGGCTTTGCCGCGGTCGAGCCTCGGCTCTATGAGGTCGCACGCGTGCTGCAC
ATGTCGCGGCTTGCCGTCATCTTCAAGATCGCGCTGCCGTCAGCGGCGCCCGACATTCTCGCCGGGATGCGGCTGAGCTT
GACCGTGGCGCTGATCCTCGCCGTCGTGTGCGAGATGCTCGCGGGGCTCGACGGCCTCGGCCAGTGGGTGCTGCTGTCGG
CGCGCGCGTTCCGATCCGCCGACCTGTTCGCCGGCGTGCTGTTGCTCGGCGCCATCGGCTACGTCACGTCGGTCGCAATG
GGCGCCGCCGAAAGCCGCCTCTTGCGTTGGCAGGCCGCGCGGCGATAG

Upstream 100 bases:

>100_bases
ATCTCGTCTGGATCGGCGTCACGGGATTCGCGCTCAATGCTGCGTTGATCGCCGCACAGCGGACTTTGTTCGGGCGCGCC
GCATTGTCAGGTGACAATCC

Downstream 100 bases:

>100_bases
CTCAGCGCGCCAGCCCCGCGACGCGGCCAAGCGCGACGGCGGTGAGCAGGCCGTTGCCGGAGAGATAGCCGGCGGCGTCC
GCGCCGGAGACGCCGCAAGC

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MRWSVIAWRVASFAVAAGFIAAWQLAADRRLVSPVFLPGPDRAWASLLRGFTSGDLLTKLAGTLAHMAYGWLLASIVGIA
LGAMIGSSKAMRSYVAPTLELLRPLPVSAIIPVAIAALGLSQSMALFVIAFGSLWPMLLGTIHGFAAVEPRLYEVARVLH
MSRLAVIFKIALPSAAPDILAGMRLSLTVALILAVVCEMLAGLDGLGQWVLLSARAFRSADLFAGVLLLGAIGYVTSVAM
GAAESRLLRWQAARR

Sequences:

>Translated_255_residues
MRWSVIAWRVASFAVAAGFIAAWQLAADRRLVSPVFLPGPDRAWASLLRGFTSGDLLTKLAGTLAHMAYGWLLASIVGIA
LGAMIGSSKAMRSYVAPTLELLRPLPVSAIIPVAIAALGLSQSMALFVIAFGSLWPMLLGTIHGFAAVEPRLYEVARVLH
MSRLAVIFKIALPSAAPDILAGMRLSLTVALILAVVCEMLAGLDGLGQWVLLSARAFRSADLFAGVLLLGAIGYVTSVAM
GAAESRLLRWQAARR
>Mature_255_residues
MRWSVIAWRVASFAVAAGFIAAWQLAADRRLVSPVFLPGPDRAWASLLRGFTSGDLLTKLAGTLAHMAYGWLLASIVGIA
LGAMIGSSKAMRSYVAPTLELLRPLPVSAIIPVAIAALGLSQSMALFVIAFGSLWPMLLGTIHGFAAVEPRLYEVARVLH
MSRLAVIFKIALPSAAPDILAGMRLSLTVALILAVVCEMLAGLDGLGQWVLLSARAFRSADLFAGVLLLGAIGYVTSVAM
GAAESRLLRWQAARR

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=246, Percent_Identity=28.4552845528455, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1786564, Length=226, Percent_Identity=29.2035398230088, Blast_Score=91, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27021; Mature: 27021

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]