| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342336
Identifier: 146342336
GI number: 146342336
Start: 5673578
End: 5674516
Strand: Direct
Name: 146342336
Synonym: BRADO5492
Alternate gene names: NA
Gene position: 5673578-5674516 (Clockwise)
Preceding gene: 146342334
Following gene: 146342339
Centisome position: 76.09
GC content: 65.6
Gene sequence:
>939_bases ATGTCCAAACGCCACGAGATTCCCGCGACGCATGAGAGCATGGTGTGGGGCTATCTCGACAGCACCACGCCGCCGGTGCT CGAGGTCGCCTCCGGCGATACGGTGACGCTGCATTCCTTCCCGGCCGGCGGCAAGGAGACCTTGCCCAAGGACCACAGCA TCGTTCCGCCTGCGTACCTCACCGCGCTGGACACCATGATCCAGGGGCCGGGGCCGCATTTCATCACCGGCCCGGTCTAT GTGAAGGGCGCACAGCCCGGCGACACGCTGCAGGTCGACATCCTCAGTTGCAAGGTCAGCCAGGACTGGGGCTTCGTCTC GATCCTGCCCTTGCTCGGCACCCTGCCCGACGAGTTCACCGACTACGAGACCATCCATCCGAAGGTCGATCACGAGCGCC AGGTCTGCATCATGCCCTGGGGCACCGAGATCGCGCTCGATCCGTTCTTCGGCATCATCGCGACAGCGCCGCCGCCGGCG TGGGGACGGTGCGGCTCTCCGGTGCCGCGCAGCTTCGGCGGCAACATGGACAACAAGGAGCTGCGGCCCGGCACGACGCT GTATCTGCCCGTGTTCAACGAGGGCGCGCTGTTCTTCGCCGGCGATGGCCACGGCGTGCAGGGTGACGGCGAGGTCTGCA TCACCGCGCTCGAGACCGGCGTCACCGGCACCTTCCGCCTCACGGTACGCAAGGACATGGATATCACCTGGCCGTTCGCC GAGAACGCCACCCACCTGATGTCGATCGGCCTCGACGAGGATCTCGACGACGCCGCCAAGCAGGCGACTCGCGAGATGGT CAAGCATGTCTGCGCCCGCACCAACCTGTCGCGCAACCAGGCCTACATGCTGTGCTCGCTGGCCGGCAATCTGCGCGTCA CCCAGATGGTGGACGGCAACAAGGGCATCCACATGCTGCTGCCGAAGGCTTATCTTTAG
Upstream 100 bases:
>100_bases TGCCAGGAGCGTAAGCAAGGCTGAACAGTTTTTGGCATTGCTCGATGCCGCGACCTGCCTTGAAATCAGCGCGCAGACCC GAGCCCGACGGAGACAGCCC
Downstream 100 bases:
>100_bases TCCCTCCTCTACCGGTTGACGAAGCGGTCGTGCGCGCTCAGCACGACCTGCCCGGCGGCATCGATCGCCTGGAAGGTGAC ATCGGCATCCAAAGGCTCGG
Product: putative acetamidase/formamidase family protein
Products: NA
Alternate protein names: Acetamidase/Formamidase Family Protein; Formamidase; Acetamidase; Amidase; Acetamidase/Formamidase Family; Transcriptional Regulator; AraC Family Transcriptional Regulator; Acetamidase/Formamidase Protein; Amidase-Related Protein; Amidae; Twin-Arginine Translocation Pathway Signal; Formamidase/Acetamidase; Transcriptional Regulatory Protein; Transcription Regulator AraC Family; Helix-Turn-Helix Domain-Containing Protein
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MSKRHEIPATHESMVWGYLDSTTPPVLEVASGDTVTLHSFPAGGKETLPKDHSIVPPAYLTALDTMIQGPGPHFITGPVY VKGAQPGDTLQVDILSCKVSQDWGFVSILPLLGTLPDEFTDYETIHPKVDHERQVCIMPWGTEIALDPFFGIIATAPPPA WGRCGSPVPRSFGGNMDNKELRPGTTLYLPVFNEGALFFAGDGHGVQGDGEVCITALETGVTGTFRLTVRKDMDITWPFA ENATHLMSIGLDEDLDDAAKQATREMVKHVCARTNLSRNQAYMLCSLAGNLRVTQMVDGNKGIHMLLPKAYL
Sequences:
>Translated_312_residues MSKRHEIPATHESMVWGYLDSTTPPVLEVASGDTVTLHSFPAGGKETLPKDHSIVPPAYLTALDTMIQGPGPHFITGPVY VKGAQPGDTLQVDILSCKVSQDWGFVSILPLLGTLPDEFTDYETIHPKVDHERQVCIMPWGTEIALDPFFGIIATAPPPA WGRCGSPVPRSFGGNMDNKELRPGTTLYLPVFNEGALFFAGDGHGVQGDGEVCITALETGVTGTFRLTVRKDMDITWPFA ENATHLMSIGLDEDLDDAAKQATREMVKHVCARTNLSRNQAYMLCSLAGNLRVTQMVDGNKGIHMLLPKAYL >Mature_311_residues SKRHEIPATHESMVWGYLDSTTPPVLEVASGDTVTLHSFPAGGKETLPKDHSIVPPAYLTALDTMIQGPGPHFITGPVYV KGAQPGDTLQVDILSCKVSQDWGFVSILPLLGTLPDEFTDYETIHPKVDHERQVCIMPWGTEIALDPFFGIIATAPPPAW GRCGSPVPRSFGGNMDNKELRPGTTLYLPVFNEGALFFAGDGHGVQGDGEVCITALETGVTGTFRLTVRKDMDITWPFAE NATHLMSIGLDEDLDDAAKQATREMVKHVCARTNLSRNQAYMLCSLAGNLRVTQMVDGNKGIHMLLPKAYL
Specific function: Unknown
COG id: COG2421
COG function: function code C; Predicted acetamidase/formamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33916; Mature: 33785
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRHEIPATHESMVWGYLDSTTPPVLEVASGDTVTLHSFPAGGKETLPKDHSIVPPAYL CCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHH TALDTMIQGPGPHFITGPVYVKGAQPGDTLQVDILSCKVSQDWGFVSILPLLGTLPDEFT HHHHHHHCCCCCCEEECCEEEECCCCCCEEEEEEEEEEECCCCCCEEHHHHHCCCCHHHC DYETIHPKVDHERQVCIMPWGTEIALDPFFGIIATAPPPAWGRCGSPVPRSFGGNMDNKE CCCCCCCCCCCCCEEEEEECCCCEEECCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCCC LRPGTTLYLPVFNEGALFFAGDGHGVQGDGEVCITALETGVTGTFRLTVRKDMDITWPFA CCCCCEEEEEEECCCEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCEEECCCC ENATHLMSIGLDEDLDDAAKQATREMVKHVCARTNLSRNQAYMLCSLAGNLRVTQMVDGN CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCC KGIHMLLPKAYL CCEEEECCCCCC >Mature Secondary Structure SKRHEIPATHESMVWGYLDSTTPPVLEVASGDTVTLHSFPAGGKETLPKDHSIVPPAYL CCCCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHH TALDTMIQGPGPHFITGPVYVKGAQPGDTLQVDILSCKVSQDWGFVSILPLLGTLPDEFT HHHHHHHCCCCCCEEECCEEEECCCCCCEEEEEEEEEEECCCCCCEEHHHHHCCCCHHHC DYETIHPKVDHERQVCIMPWGTEIALDPFFGIIATAPPPAWGRCGSPVPRSFGGNMDNKE CCCCCCCCCCCCCEEEEEECCCCEEECCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCCC LRPGTTLYLPVFNEGALFFAGDGHGVQGDGEVCITALETGVTGTFRLTVRKDMDITWPFA CCCCCEEEEEEECCCEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCEEECCCC ENATHLMSIGLDEDLDDAAKQATREMVKHVCARTNLSRNQAYMLCSLAGNLRVTQMVDGN CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCC KGIHMLLPKAYL CCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA