| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is iorB [C]
Identifier: 146342334
GI number: 146342334
Start: 5670491
End: 5672824
Strand: Direct
Name: iorB [C]
Synonym: BRADO5489
Alternate gene names: 146342334
Gene position: 5670491-5672824 (Clockwise)
Preceding gene: 146342333
Following gene: 146342336
Centisome position: 76.05
GC content: 67.35
Gene sequence:
>2334_bases ATGACCATCATCGCAAATCCGGACATCGCGAGTTCCAACTCGCGCCGCGGCTTCGAGCGGCATCTCAAGGTCGAGAACGT CTCGCGCCGCGCCATCTTGCAGACGCTAGGTCTCGCGGGCGGCTTCGTGCTCGCTGCGCCCCTGCTCTCGCGGCCCGCAT TCGCCGCCTATGAGACCGGCGCCGGCAAGATGCCGCACGGCACCGTGGTCGATCCGAAGGTCTTCGTGTCGATCGCGCCC GACGGCATCGTCTCGATCCTGGCGCATCGCTCCGAGATGGGCACCGGCGTGCGCACCAGCCTGCCGCTGATCGTGGCCGA GGAGATGGAAGCCGACTGGACGAAGGTGCGCGTGGTGCAGGCGCCCGGCGACGAGGTGAAGTTCGGCAACCAGGACACCG ACGGCTCGCGCAGCACACGGCACTATCTGTTGCCGATGCGCCAGATCGGCGCGATGGCGCGCGCGATGCTCGAAGCCGCT GCCGCCAAGAAACTTGGCGTGCCCGCAAGCGAGGTGAAGGCGGTCAACCACGAGGTCGTGCACAGCGCCAGCGGCAAGCG CCTCAGCTTCGGCGAGCTCGCGGCCGATGCGGCCAGCCAGCCGGTGCCCGCGGTCGACACCATCAAGCTGAAGTCGCCTG GTGATTTCCGCTATCTCGGCAAGGGCCAGGTCAGCATCGTCGATCTCCGTGACATCACCGTCGGCAAGGCGAGCTACGGC GCCGACGTCCGCCTGCCCGGCATGAAATACGCCGTCATCGCCCGGCCGCCGGTGACCGGCGGCAAGGTCAAGTCGTTCGA CTCCGCCGAGGCGCTGAAAGTGTCCGGCGTCGAGAAGGTGCTCGAGGTCAAGGGCTGGCCGTGGCCATCGAAGTTCCAGC CGCTTGGTGGTGTCGCTGTCATTGCGCGCAACACGGGCGCTGCGATCAAGGGCCGCGACGCCCTGAAGGTCGAGTGGGAC GACGGTCCCAATGCGGCCTACGACTCGGTCGCCTATCGCGCCGAGCTCGAAGCCGCTGCGCGACAGCCGGGCCTTGTCGT GCGCCAGGAAGGTGATGCCGAAGCGGCGCTGAAATCGGCCGACAAGGTGATCACCGGCGAGTACTACCTGCCGCATTTCG CCCATGCCAGCATGGAGCCGCCGGTCGCGGTCGCCGACGTCAAGGGCGACAAGGCCGAGATCTGGGCGCCGGTGCAGAGC CCCGGCGGCACCCGCGAGGACGTCGCCAAGACGCTGCAGATCCCGATCGAGAACGTGACCGTCAACGTCACCCTGCTCGG CGGCGGCTTCGGCCGCAAATCGAAATGCGACTTCGCGCTCGAAGCCGCCCTGCTCTCCAAGGAGCTGGGCGCGCCGGTGA AGGTGCAGTGGACGCGTGACGACGACATCCAGCACGATTTCCTGCACACGGTCTCGGTCGAGCGCATCGAGGCGGGGCTG GACAAGAGCGGCAAGGTCGTCGCCTGGCGTCACCGCAGCGTCGCGCCGACGATCCTGTCGACCTTCGCGGCCGGCGCCGA CCATGCCGCGCCGTTCGAGCTCGGCATGGGCCTCGTCGACATGCCGTTCGAGATCGCCAACATCCAATGCGAGAACCCCG CCGCCAAGGCAATGACCCGCATCGGCTGGTTCCGCTCGGTCTCGAACATTCCGCGCGCCTTCGCCGTGCAGTCGATGGTC GGCGAGATCGCCGCCGCCACTGGCCGCGACCAGAAGGAGATGCTGCTCGAGCTGATCGGCAGTCCGCGCGTCGTCAAGCT CGCCTCGGTGAAGGATCTCTGGAACTATGGCGAGCCCTATGAGAGCTATCCGATCGACACCGGACGGCTGCGACGCGTTG TCGAGTTCGTCGCGGAGAAGGGCAATTGGGGCCGCAGCGTTCCCAAGGGCCACGGGCTCGGCATCGCCGCACATCGCAGC TTCGTCAGCTACATCGCCACCATCGTGGAGGTGTCGGTCGACGACAAGGGCAAGCTGACCGTGCATCAGGTCGACAGCGC GATCGACTGCGGTGTGTTCGTCAACCCGGAGCGCATCCAGTCGCAGCTCGAAGGTGCTGCGATCATGGGGCTGAGCCTCG CCAAATATGGCGAGGTCAGCTTTAAGAACGGCCGGGTGCAGCAGCGCAACTTCGACGACCATCAGGTGGTCCGGATCGAC GAGGCGCCGCTGGTCACCAACGTGCACATCGTCCCGGCGGATGCCGAGACGCCGCCGAGCGGCGTCGGGGAGCCGGGCGT GCCGCCATTCGCGCCGGCGCTCGCCAACGCGATCTTTGCCGCCACCGGCAAACGGCTGCGGGCGCTGCCAATCGGCAACC AGCTCGCGACCTGA
Upstream 100 bases:
>100_bases ATGACCAGATCCGGGACGCGATGTCCGGCAATATCTGCCGCTGCGGCTGCTATCAGCGCATCGAGAATGCGGTCCATCTG GCCTCGACGGGGGTGTGATC
Downstream 100 bases:
>100_bases CGGCCGCGACACGACGACGTCATCGGCCGGAGCAATCCGGCCGATGAGCGCCTCGACAGAGCTTTGATCTATCAGCGCCC GTAGCGCACCGAGGCATAGC
Product: isoquinoline 1-oxidoreductase subunit beta
Products: NA
Alternate protein names: ALDH [H]
Number of amino acids: Translated: 777; Mature: 776
Protein sequence:
>777_residues MTIIANPDIASSNSRRGFERHLKVENVSRRAILQTLGLAGGFVLAAPLLSRPAFAAYETGAGKMPHGTVVDPKVFVSIAP DGIVSILAHRSEMGTGVRTSLPLIVAEEMEADWTKVRVVQAPGDEVKFGNQDTDGSRSTRHYLLPMRQIGAMARAMLEAA AAKKLGVPASEVKAVNHEVVHSASGKRLSFGELAADAASQPVPAVDTIKLKSPGDFRYLGKGQVSIVDLRDITVGKASYG ADVRLPGMKYAVIARPPVTGGKVKSFDSAEALKVSGVEKVLEVKGWPWPSKFQPLGGVAVIARNTGAAIKGRDALKVEWD DGPNAAYDSVAYRAELEAAARQPGLVVRQEGDAEAALKSADKVITGEYYLPHFAHASMEPPVAVADVKGDKAEIWAPVQS PGGTREDVAKTLQIPIENVTVNVTLLGGGFGRKSKCDFALEAALLSKELGAPVKVQWTRDDDIQHDFLHTVSVERIEAGL DKSGKVVAWRHRSVAPTILSTFAAGADHAAPFELGMGLVDMPFEIANIQCENPAAKAMTRIGWFRSVSNIPRAFAVQSMV GEIAAATGRDQKEMLLELIGSPRVVKLASVKDLWNYGEPYESYPIDTGRLRRVVEFVAEKGNWGRSVPKGHGLGIAAHRS FVSYIATIVEVSVDDKGKLTVHQVDSAIDCGVFVNPERIQSQLEGAAIMGLSLAKYGEVSFKNGRVQQRNFDDHQVVRID EAPLVTNVHIVPADAETPPSGVGEPGVPPFAPALANAIFAATGKRLRALPIGNQLAT
Sequences:
>Translated_777_residues MTIIANPDIASSNSRRGFERHLKVENVSRRAILQTLGLAGGFVLAAPLLSRPAFAAYETGAGKMPHGTVVDPKVFVSIAP DGIVSILAHRSEMGTGVRTSLPLIVAEEMEADWTKVRVVQAPGDEVKFGNQDTDGSRSTRHYLLPMRQIGAMARAMLEAA AAKKLGVPASEVKAVNHEVVHSASGKRLSFGELAADAASQPVPAVDTIKLKSPGDFRYLGKGQVSIVDLRDITVGKASYG ADVRLPGMKYAVIARPPVTGGKVKSFDSAEALKVSGVEKVLEVKGWPWPSKFQPLGGVAVIARNTGAAIKGRDALKVEWD DGPNAAYDSVAYRAELEAAARQPGLVVRQEGDAEAALKSADKVITGEYYLPHFAHASMEPPVAVADVKGDKAEIWAPVQS PGGTREDVAKTLQIPIENVTVNVTLLGGGFGRKSKCDFALEAALLSKELGAPVKVQWTRDDDIQHDFLHTVSVERIEAGL DKSGKVVAWRHRSVAPTILSTFAAGADHAAPFELGMGLVDMPFEIANIQCENPAAKAMTRIGWFRSVSNIPRAFAVQSMV GEIAAATGRDQKEMLLELIGSPRVVKLASVKDLWNYGEPYESYPIDTGRLRRVVEFVAEKGNWGRSVPKGHGLGIAAHRS FVSYIATIVEVSVDDKGKLTVHQVDSAIDCGVFVNPERIQSQLEGAAIMGLSLAKYGEVSFKNGRVQQRNFDDHQVVRID EAPLVTNVHIVPADAETPPSGVGEPGVPPFAPALANAIFAATGKRLRALPIGNQLAT >Mature_776_residues TIIANPDIASSNSRRGFERHLKVENVSRRAILQTLGLAGGFVLAAPLLSRPAFAAYETGAGKMPHGTVVDPKVFVSIAPD GIVSILAHRSEMGTGVRTSLPLIVAEEMEADWTKVRVVQAPGDEVKFGNQDTDGSRSTRHYLLPMRQIGAMARAMLEAAA AKKLGVPASEVKAVNHEVVHSASGKRLSFGELAADAASQPVPAVDTIKLKSPGDFRYLGKGQVSIVDLRDITVGKASYGA DVRLPGMKYAVIARPPVTGGKVKSFDSAEALKVSGVEKVLEVKGWPWPSKFQPLGGVAVIARNTGAAIKGRDALKVEWDD GPNAAYDSVAYRAELEAAARQPGLVVRQEGDAEAALKSADKVITGEYYLPHFAHASMEPPVAVADVKGDKAEIWAPVQSP GGTREDVAKTLQIPIENVTVNVTLLGGGFGRKSKCDFALEAALLSKELGAPVKVQWTRDDDIQHDFLHTVSVERIEAGLD KSGKVVAWRHRSVAPTILSTFAAGADHAAPFELGMGLVDMPFEIANIQCENPAAKAMTRIGWFRSVSNIPRAFAVQSMVG EIAAATGRDQKEMLLELIGSPRVVKLASVKDLWNYGEPYESYPIDTGRLRRVVEFVAEKGNWGRSVPKGHGLGIAAHRSF VSYIATIVEVSVDDKGKLTVHQVDSAIDCGVFVNPERIQSQLEGAAIMGLSLAKYGEVSFKNGRVQQRNFDDHQVVRIDE APLVTNVHIVPADAETPPSGVGEPGVPPFAPALANAIFAATGKRLRALPIGNQLAT
Specific function: Presumed To Be A Dehydrogenase, But Possibly An Oxidase. Participates In Limited Purine Salvage (Requires Aspartate) But Does Not Support Aerobic Growth On Purines As The Sole Carbon Source (Purine Catabolism). Deletion Results In Increased Adenine Sensit
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI91823271, Length=258, Percent_Identity=26.3565891472868, Blast_Score=70, Evalue=9e-12, Organism=Escherichia coli, GI1789230, Length=486, Percent_Identity=24.4855967078189, Blast_Score=74, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.3 [H]
Molecular weight: Translated: 82983; Mature: 82852
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIIANPDIASSNSRRGFERHLKVENVSRRAILQTLGLAGGFVLAAPLLSRPAFAAYETG CEEECCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECC AGKMPHGTVVDPKVFVSIAPDGIVSILAHRSEMGTGVRTSLPLIVAEEMEADWTKVRVVQ CCCCCCCCEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEE APGDEVKFGNQDTDGSRSTRHYLLPMRQIGAMARAMLEAAAAKKLGVPASEVKAVNHEVV CCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH HSASGKRLSFGELAADAASQPVPAVDTIKLKSPGDFRYLGKGQVSIVDLRDITVGKASYG HCCCCCEEEHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCEEEEEEEEEEECCCCCC ADVRLPGMKYAVIARPPVTGGKVKSFDSAEALKVSGVEKVLEVKGWPWPSKFQPLGGVAV CCEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE IARNTGAAIKGRDALKVEWDDGPNAAYDSVAYRAELEAAARQPGLVVRQEGDAEAALKSA EEECCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHC DKVITGEYYLPHFAHASMEPPVAVADVKGDKAEIWAPVQSPGGTREDVAKTLQIPIENVT CCEEECCCCCCHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCEEEEEE VNVTLLGGGFGRKSKCDFALEAALLSKELGAPVKVQWTRDDDIQHDFLHTVSVERIEAGL EEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC DKSGKVVAWRHRSVAPTILSTFAAGADHAAPFELGMGLVDMPFEIANIQCENPAAKAMTR CCCCCEEEEECCCCCHHHHHHHHCCCCCCCCHHHCCCEECCCEEEEEEEECCHHHHHHHH IGWFRSVSNIPRAFAVQSMVGEIAAATGRDQKEMLLELIGSPRVVKLASVKDLWNYGEPY HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECHHHHHHCCCCH ESYPIDTGRLRRVVEFVAEKGNWGRSVPKGHGLGIAAHRSFVSYIATIVEVSVDDKGKLT HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCEE VHQVDSAIDCGVFVNPERIQSQLEGAAIMGLSLAKYGEVSFKNGRVQQRNFDDHQVVRID EEECCCCCCCCEEECHHHHHHHHCCEEEEEEEHHHCCCEEECCCCCCCCCCCCCEEEEEE EAPLVTNVHIVPADAETPPSGVGEPGVPPFAPALANAIFAATGKRLRALPIGNQLAT CCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHCCC >Mature Secondary Structure TIIANPDIASSNSRRGFERHLKVENVSRRAILQTLGLAGGFVLAAPLLSRPAFAAYETG EEECCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECC AGKMPHGTVVDPKVFVSIAPDGIVSILAHRSEMGTGVRTSLPLIVAEEMEADWTKVRVVQ CCCCCCCCEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEE APGDEVKFGNQDTDGSRSTRHYLLPMRQIGAMARAMLEAAAAKKLGVPASEVKAVNHEVV CCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH HSASGKRLSFGELAADAASQPVPAVDTIKLKSPGDFRYLGKGQVSIVDLRDITVGKASYG HCCCCCEEEHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCEEEEEEEEEEECCCCCC ADVRLPGMKYAVIARPPVTGGKVKSFDSAEALKVSGVEKVLEVKGWPWPSKFQPLGGVAV CCEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE IARNTGAAIKGRDALKVEWDDGPNAAYDSVAYRAELEAAARQPGLVVRQEGDAEAALKSA EEECCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHC DKVITGEYYLPHFAHASMEPPVAVADVKGDKAEIWAPVQSPGGTREDVAKTLQIPIENVT CCEEECCCCCCHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCEEEEEE VNVTLLGGGFGRKSKCDFALEAALLSKELGAPVKVQWTRDDDIQHDFLHTVSVERIEAGL EEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC DKSGKVVAWRHRSVAPTILSTFAAGADHAAPFELGMGLVDMPFEIANIQCENPAAKAMTR CCCCCEEEEECCCCCHHHHHHHHCCCCCCCCHHHCCCEECCCEEEEEEEECCHHHHHHHH IGWFRSVSNIPRAFAVQSMVGEIAAATGRDQKEMLLELIGSPRVVKLASVKDLWNYGEPY HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECHHHHHHCCCCH ESYPIDTGRLRRVVEFVAEKGNWGRSVPKGHGLGIAAHRSFVSYIATIVEVSVDDKGKLT HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCEE VHQVDSAIDCGVFVNPERIQSQLEGAAIMGLSLAKYGEVSFKNGRVQQRNFDDHQVVRID EEECCCCCCCCEEECHHHHHHHHCCEEEEEEEHHHCCCEEECCCCCCCCCCCCCEEEEEE EAPLVTNVHIVPADAETPPSGVGEPGVPPFAPALANAIFAATGKRLRALPIGNQLAT CCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2606906 [H]