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The map label for this gene is ssuC [C]

Identifier: 146342318

GI number: 146342318

Start: 5657543

End: 5658280

Strand: Direct

Name: ssuC [C]

Synonym: BRADO5473

Alternate gene names: 146342318

Gene position: 5657543-5658280 (Clockwise)

Preceding gene: 146342317

Following gene: 146342319

Centisome position: 75.87

GC content: 68.83

Gene sequence:

>738_bases
GTGCTGCGTCTTCTATCCTTCGCGCTCCTGCTGGCCACCTGGTGGGTGGCCGCGACCCTCGCCGGCAGCGCCAAGCTGCC
GCCGCCCTCGACCGTGCTGGCGGTCGCCGTCGCGGAAGCAAAATCCGGCGCGCTGTTCCTCCACCTCGGCGCGACGCTCG
CCCGCGTCGCCCTCGCTTTCACCTTGTCGATGGCGATCGGATCGGCGCTCGGCTACTGGATGGGCCGCAGCCGTCTCGCC
AACCGCCTCGGCGATCCCTGGCTGATCCTGTTGCTGAACCTGCCGGCGCTGGTGGTGATCGTGCTGGCCTATATCTGGGC
CGGCCTCACCGAGGTCGCGGCCATCGCGGCGATCGCGATCAACAAGCTGCCGACCGCCGTCGTCACCTTGCGCGAGGGGG
CCCGCGCGCTCGATCCGTCGCTGGATGAGATGGCCAAGGTGTTCGCCTTGCCGCGCAGCCGCATCCTCCGCCACGTCCTG
CTGCCGCAGCTCGCCCCCTATATTGCGGCCGCTGCGCGCTCCGGCCTGTCGCTGGTCTGGAAGATCGTGCTGGTGGCCGA
GCTGCTCGGACGGCCTAACGGCATCGGCTTCGAGATCGGCGTCGCCTTCCAGCTGTTCGACATCCCGCTGCTGCTCGCCT
ACTCCCTCAGCTTCGCCGCCGTCGTTCTGGTGATCGAAGCTCTCTTCGTGCAGCCATTCGAGCAGCGCGCATCGAGGTGG
CGTCTCCGTGCGGCTTGA

Upstream 100 bases:

>100_bases
TTCTCTACGGCGTGCTCGCCTCGATCGGCGGCCGCGATCTGGTCGGCCCCGCCGCTGAGCTCAGTCCCGGCACTTACTAC
AGGGCGGATGCGAGGGATTA

Downstream 100 bases:

>100_bases
GGTCGATATCAGGTCAAAGAGCTACACCAGCGCCAATGGCAAGCGCCAGGAGGTGATATCAGGCATTGCCTTCACCCTGG
AGCGCGGAGAGCTCGGCGTC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLRLLSFALLLATWWVAATLAGSAKLPPPSTVLAVAVAEAKSGALFLHLGATLARVALAFTLSMAIGSALGYWMGRSRLA
NRLGDPWLILLLNLPALVVIVLAYIWAGLTEVAAIAAIAINKLPTAVVTLREGARALDPSLDEMAKVFALPRSRILRHVL
LPQLAPYIAAAARSGLSLVWKIVLVAELLGRPNGIGFEIGVAFQLFDIPLLLAYSLSFAAVVLVIEALFVQPFEQRASRW
RLRAA

Sequences:

>Translated_245_residues
MLRLLSFALLLATWWVAATLAGSAKLPPPSTVLAVAVAEAKSGALFLHLGATLARVALAFTLSMAIGSALGYWMGRSRLA
NRLGDPWLILLLNLPALVVIVLAYIWAGLTEVAAIAAIAINKLPTAVVTLREGARALDPSLDEMAKVFALPRSRILRHVL
LPQLAPYIAAAARSGLSLVWKIVLVAELLGRPNGIGFEIGVAFQLFDIPLLLAYSLSFAAVVLVIEALFVQPFEQRASRW
RLRAA
>Mature_245_residues
MLRLLSFALLLATWWVAATLAGSAKLPPPSTVLAVAVAEAKSGALFLHLGATLARVALAFTLSMAIGSALGYWMGRSRLA
NRLGDPWLILLLNLPALVVIVLAYIWAGLTEVAAIAAIAINKLPTAVVTLREGARALDPSLDEMAKVFALPRSRILRHVL
LPQLAPYIAAAARSGLSLVWKIVLVAELLGRPNGIGFEIGVAFQLFDIPLLLAYSLSFAAVVLVIEALFVQPFEQRASRW
RLRAA

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=190, Percent_Identity=31.5789473684211, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1786564, Length=243, Percent_Identity=27.5720164609054, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 26233; Mature: 26233

Theoretical pI: Translated: 11.19; Mature: 11.19

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLLSFALLLATWWVAATLAGSAKLPPPSTVLAVAVAEAKSGALFLHLGATLARVALAF
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH
TLSMAIGSALGYWMGRSRLANRLGDPWLILLLNLPALVVIVLAYIWAGLTEVAAIAAIAI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKLPTAVVTLREGARALDPSLDEMAKVFALPRSRILRHVLLPQLAPYIAAAARSGLSLVW
HHHHHHHHHHHHCCHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIVLVAELLGRPNGIGFEIGVAFQLFDIPLLLAYSLSFAAVVLVIEALFVQPFEQRASRW
HHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHC
RLRAA
CCCCC
>Mature Secondary Structure
MLRLLSFALLLATWWVAATLAGSAKLPPPSTVLAVAVAEAKSGALFLHLGATLARVALAF
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH
TLSMAIGSALGYWMGRSRLANRLGDPWLILLLNLPALVVIVLAYIWAGLTEVAAIAAIAI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKLPTAVVTLREGARALDPSLDEMAKVFALPRSRILRHVLLPQLAPYIAAAARSGLSLVW
HHHHHHHHHHHHCCHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIVLVAELLGRPNGIGFEIGVAFQLFDIPLLLAYSLSFAAVVLVIEALFVQPFEQRASRW
HHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHC
RLRAA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA