| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146342226
Identifier: 146342226
GI number: 146342226
Start: 5584195
End: 5585115
Strand: Direct
Name: 146342226
Synonym: BRADO5378
Alternate gene names: NA
Gene position: 5584195-5585115 (Clockwise)
Preceding gene: 146342225
Following gene: 146342227
Centisome position: 74.89
GC content: 69.38
Gene sequence:
>921_bases ATGAGTGCTCCAGTTCAGAATGATCCGGACAGGCCGGCGCCGCCTTGGGCCAGCGCGGAGCTTCGCAAATACGCGCCGCG CCGCCGTCAGCCTGATGCTAGCCCGGCGCCTTACGATCTGCCTCAGGACGCCGGTTCCCTGCCGCACCATCTCGTGGCAC GGAAAAACTTGCTGCCAGTGCGCCAGCCAGCGATCAATCTGGACGACGAAGAGGTGCGTCGCGCCTGGAGCGCGAAGCTC GATCCCGTCGTGATGCCGCTGCCGCCTGAGGACATGGACAAGGCGTCGCCGCTCGGCCTCGTGATCAAGATCAGCGCGGC CGTCGGCATCGCAGCGTCCATCGCGCTGATGGTCGCCAATATGGTCGCAGTCGACGGGAGCGGGACCGCGGCGGCCGGCA AAGGCCCGATGATGCCCTCCACCGTGCTGGAGAGTCTCGCCCAGATCGACCCGGCGGAGGCCAAGGTCGCGCAGGATGAT CCGCCGCAGACGGTCGCATCGCTCGCGACACCCAGCACGACCGAGGCGGCGACGCGTAGCTGGCCGGCGGCACCCCAATC GCCTCCATCCATGACCGCCGCGCCGCCGGCAGCTTCGAGCCAGCCGTCGCCGCCGCCCGTCGCGACATCTCGTCCGACAA TCCCGCTGCCCCGCGACGAAGTCGATTCGCTGATGAAGCGCGGACGCGACCTGCTCGCCGCCGGCGATGTTGCGAGCGCC CGCCTGATCCTGACAAGGCTGTCCGATGCGGGCATCGCCGACGCATCGCTTCTGCTCGCACGCACCTACGACCCGAACGA GCTGACGAAGTCGCGTCTCCTCGGGGCCGTCCCCGACGCGGCCAGGGCGCGCACCTGGTATCTCAGGGCCGCAGAGCAGG GATCGCCGGAAGCCAACCGCCGGATCTCCGCGGCGCGCTGA
Upstream 100 bases:
>100_bases TCCTCCGATCTCGCAACATGCGATCATCGGGCAGGCCGCGCATGCCTGACGCCCTGAAGCTCTCTCCGGCGAGCGGATCG CCGGAGACAGGAGGCTAGTG
Downstream 100 bases:
>100_bases CGACGTCAGATCTCAGCTTCTCAGACGCGATCCGGACCGCCTGGCAACAAGGGCGGCAGCGATCCCCTGCGCTCAAAAGC CGGACCATCGACGGGAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSAPVQNDPDRPAPPWASAELRKYAPRRRQPDASPAPYDLPQDAGSLPHHLVARKNLLPVRQPAINLDDEEVRRAWSAKL DPVVMPLPPEDMDKASPLGLVIKISAAVGIAASIALMVANMVAVDGSGTAAAGKGPMMPSTVLESLAQIDPAEAKVAQDD PPQTVASLATPSTTEAATRSWPAAPQSPPSMTAAPPAASSQPSPPPVATSRPTIPLPRDEVDSLMKRGRDLLAAGDVASA RLILTRLSDAGIADASLLLARTYDPNELTKSRLLGAVPDAARARTWYLRAAEQGSPEANRRISAAR
Sequences:
>Translated_306_residues MSAPVQNDPDRPAPPWASAELRKYAPRRRQPDASPAPYDLPQDAGSLPHHLVARKNLLPVRQPAINLDDEEVRRAWSAKL DPVVMPLPPEDMDKASPLGLVIKISAAVGIAASIALMVANMVAVDGSGTAAAGKGPMMPSTVLESLAQIDPAEAKVAQDD PPQTVASLATPSTTEAATRSWPAAPQSPPSMTAAPPAASSQPSPPPVATSRPTIPLPRDEVDSLMKRGRDLLAAGDVASA RLILTRLSDAGIADASLLLARTYDPNELTKSRLLGAVPDAARARTWYLRAAEQGSPEANRRISAAR >Mature_305_residues SAPVQNDPDRPAPPWASAELRKYAPRRRQPDASPAPYDLPQDAGSLPHHLVARKNLLPVRQPAINLDDEEVRRAWSAKLD PVVMPLPPEDMDKASPLGLVIKISAAVGIAASIALMVANMVAVDGSGTAAAGKGPMMPSTVLESLAQIDPAEAKVAQDDP PQTVASLATPSTTEAATRSWPAAPQSPPSMTAAPPAASSQPSPPPVATSRPTIPLPRDEVDSLMKRGRDLLAAGDVASAR LILTRLSDAGIADASLLLARTYDPNELTKSRLLGAVPDAARARTWYLRAAEQGSPEANRRISAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32134; Mature: 32003
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPVQNDPDRPAPPWASAELRKYAPRRRQPDASPAPYDLPQDAGSLPHHLVARKNLLPV CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC RQPAINLDDEEVRRAWSAKLDPVVMPLPPEDMDKASPLGLVIKISAAVGIAASIALMVAN CCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH MVAVDGSGTAAAGKGPMMPSTVLESLAQIDPAEAKVAQDDPPQTVASLATPSTTEAATRS HHEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHCCCCCHHHHHCC WPAAPQSPPSMTAAPPAASSQPSPPPVATSRPTIPLPRDEVDSLMKRGRDLLAAGDVASA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHH RLILTRLSDAGIADASLLLARTYDPNELTKSRLLGAVPDAARARTWYLRAAEQGSPEANR HHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHEEEEEECCCCCCHHHC RISAAR CCCCCC >Mature Secondary Structure SAPVQNDPDRPAPPWASAELRKYAPRRRQPDASPAPYDLPQDAGSLPHHLVARKNLLPV CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC RQPAINLDDEEVRRAWSAKLDPVVMPLPPEDMDKASPLGLVIKISAAVGIAASIALMVAN CCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH MVAVDGSGTAAAGKGPMMPSTVLESLAQIDPAEAKVAQDDPPQTVASLATPSTTEAATRS HHEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHCCCCCHHHHHCC WPAAPQSPPSMTAAPPAASSQPSPPPVATSRPTIPLPRDEVDSLMKRGRDLLAAGDVASA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHH RLILTRLSDAGIADASLLLARTYDPNELTKSRLLGAVPDAARARTWYLRAAEQGSPEANR HHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHEEEEEECCCCCCHHHC RISAAR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA