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The map label for this gene is ahpD [H]

Identifier: 146342225

GI number: 146342225

Start: 5583149

End: 5583694

Strand: Direct

Name: ahpD [H]

Synonym: BRADO5377

Alternate gene names: 146342225

Gene position: 5583149-5583694 (Clockwise)

Preceding gene: 146342224

Following gene: 146342226

Centisome position: 74.88

GC content: 64.65

Gene sequence:

>546_bases
ATGTCGATCGAGCAGCTCAAGGACCAGATTCCGGACTTCGCCAAGGACGTCCGGCTCAACCTGTCGTCGATGGCGTCCGA
CGAGACGCTGTCGCCGCAGGCGAAGTATGGCCTGTTCGTCGCCTGCGCGATTGCGACGCGCAATCCGATGGTGATGGCGG
CCTTCGAAGCGGTCGCAGCGGCACAGTTGTCGGCGACGGCGCTTGCGGCGGCCAAGTCGGCCGCCGCGATCATGGCGATG
AATAACGTCTACTATCGTTTTGTGCACCTTGCCTCGAACAAGGAGTACGCGACGATGCCGGCCCGGCTGCGAATGAACGT
CATCGCCAATCCCGGGGTCGACAAGGCGGATTTCGAGCTGTGGTCGCTGGCGGTGTCGGCCATCAATGGCTGTGGCACCT
GCATCGACGCCCACGAAAAGGTCCTGCAAGAGGCCGCCGTTCCCGCTGCCTCGATCCAGACCGCCGTCCGCTTCGCGGCC
ATCATTCAGTCGGTCGCAGTGGCCATCGAGGCCGCCGGTGTGACGGTCGCGCTGGCCGCCGAGTAG

Upstream 100 bases:

>100_bases
CGCCGAAGGACACGCTGCGCGTGCTCGACGCGCTGCAGACCGACGAGCTCTGCCCGTGCAACCGCGAGGTCGGCGGCGAG
ACCCTGAAGGTCGCTTGATC

Downstream 100 bases:

>100_bases
AAATCTATCTTATCTGTGAATGCGGCCGGCAATGTCCGGCCGCATTTGTTTTTTGTGAGTTCACTTCAGGGTTGAAGTCG
CCGCGGCGACGATGCAGCCG

Product: alkylhydroperoxidase, AhpD protein

Products: NA

Alternate protein names: Alkylhydroperoxidase AhpD [H]

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSIEQLKDQIPDFAKDVRLNLSSMASDETLSPQAKYGLFVACAIATRNPMVMAAFEAVAAAQLSATALAAAKSAAAIMAM
NNVYYRFVHLASNKEYATMPARLRMNVIANPGVDKADFELWSLAVSAINGCGTCIDAHEKVLQEAAVPAASIQTAVRFAA
IIQSVAVAIEAAGVTVALAAE

Sequences:

>Translated_181_residues
MSIEQLKDQIPDFAKDVRLNLSSMASDETLSPQAKYGLFVACAIATRNPMVMAAFEAVAAAQLSATALAAAKSAAAIMAM
NNVYYRFVHLASNKEYATMPARLRMNVIANPGVDKADFELWSLAVSAINGCGTCIDAHEKVLQEAAVPAASIQTAVRFAA
IIQSVAVAIEAAGVTVALAAE
>Mature_180_residues
SIEQLKDQIPDFAKDVRLNLSSMASDETLSPQAKYGLFVACAIATRNPMVMAAFEAVAAAQLSATALAAAKSAAAIMAMN
NVYYRFVHLASNKEYATMPARLRMNVIANPGVDKADFELWSLAVSAINGCGTCIDAHEKVLQEAAVPAASIQTAVRFAAI
IQSVAVAIEAAGVTVALAAE

Specific function: Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity [H]

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AhpD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004674
- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 18964; Mature: 18833

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEQLKDQIPDFAKDVRLNLSSMASDETLSPQAKYGLFVACAIATRNPMVMAAFEAVAA
CCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHCEEEEEEECCCCCHHHHHHHHHHH
AQLSATALAAAKSAAAIMAMNNVYYRFVHLASNKEYATMPARLRMNVIANPGVDKADFEL
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEECCHHEEEEEEECCCCCHHHHHH
WSLAVSAINGCGTCIDAHEKVLQEAAVPAASIQTAVRFAAIIQSVAVAIEAAGVTVALAA
HHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
E
C
>Mature Secondary Structure 
SIEQLKDQIPDFAKDVRLNLSSMASDETLSPQAKYGLFVACAIATRNPMVMAAFEAVAA
CHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHCEEEEEEECCCCCHHHHHHHHHHH
AQLSATALAAAKSAAAIMAMNNVYYRFVHLASNKEYATMPARLRMNVIANPGVDKADFEL
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEECCHHEEEEEEECCCCCHHHHHH
WSLAVSAINGCGTCIDAHEKVLQEAAVPAASIQTAVRFAAIIQSVAVAIEAAGVTVALAA
HHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA