| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341710
Identifier: 146341710
GI number: 146341710
Start: 5015508
End: 5016896
Strand: Direct
Name: 146341710
Synonym: BRADO4815
Alternate gene names: NA
Gene position: 5015508-5016896 (Clockwise)
Preceding gene: 146341707
Following gene: 146341712
Centisome position: 67.26
GC content: 62.63
Gene sequence:
>1389_bases ATGGCCAGACCTTCAACGACGCACATTTCAGCAGGGCCCCGCGTCGCCGCGTCGAGCTTCGACATCTGTGCGCTGATTCC GGTCGTCGCCTTCGCCTATTCGTCGCTGATCCAGCCGCTGATCTATTTCGGCTTCCCGCCATCGCCGGGGCTTCAGGGCC TGCTGGAAAGCCGAATCGAGAACCGCATCTTCTGGCCGGCTCTGGCGGCCATTGCCATGATCATTGCCGCGCAGCGGCTC GCCCGCGGCGGACGCCTCCCCGTTCCGCCGAACATCGTCAGTCTCTGCGCCTATTTCGGTTTCGCCGGCGCCAGCATCGG CTGGGCGCTCAAACCCGAATTCGCCTTCGTCCGCTTCGTGCAGGAAGCGATGGTACTCACCGCGATCGTGCTGCCCGCCT TGTTGTCGAACCCGGCGGTCGACATCCTGCGCGGGATGTTCTTCTGTTTCGCAGCCGGCGTCATCCTCAACGTGCTTTTG ATCCCCGGCGGCTATGCGAGCTACGCGCAATACGGCGCTCAGCTGGTCGACATCGGCTACCAGGGATATTTCTCGGGAAA GAACCTGCTCGGTGAGTTCTCCGCGAGCGCACTTCTGCTGGCACTTCACGAGCTGTGTTATGCCGGACACCGCCGCGTGT TGGGGCTCGTGGTCGCCATCGGGGCAGTCACCTTGATCTTCATCTCCAGCTCCAAGACGGCGCTTGGGCTCGCCCTTCTG GCTCCCGCTCTTGCCATCATCGTGCTGCTGTTCGCTCGAACCTTGCGGCTCTCACCGGTCCTCATTCTCGCCGCGCTGGC TCTGGCCTACATCGTCATGAGCGAGCTCGCAGGCTTCAGCACCCAACGTATCGCCTATCTGTTGACAGGAGACTCGAGCT TCACGGGCCGCACCACCATATGGGCCTTTACGACGTCGGAGATCGCACAGCGGCCGCTGCTCGGCTGGGGCTATCAGAGC TTCTGGCTGGTCGGGGCAGATGCCCCGAGCGTGACCGAGGCGCCCGGCTGGGTGAAGGCCATGCCGAACTCTCATAACGG CTTCTACGACACGATTTTGGAACTGGGCTATGTGGGCTTCGCCCTCCTCCTGGTGTTTCTCGCCGCGACCGTGCATGTGA TCGGTCGCGTGATGGCCTATGATTTCAAGCGCGCATGGGTTCTTCTCTCGATGGCCTTGTTCGTCATGATCTACAATGGC CTTGAAACACTGTGGCTGCGCGCGTTCGACGTCACATGGGTGGTGTTCGTGCTCGTGACCGTCGAGGCTGCGCGATACTG GAGCCGGTTACAACAGACGACGCAGATCCACCAGCCGGCGGCGCAGCCACCGGTTCGCCCGATCGGTACACGAGCGATGT GGCGTCCCCGCCTGGGTGTTCGCCTCTGA
Upstream 100 bases:
>100_bases CTGGGGCGATATTTGATTTAATTGCCGCCCAGGGTCATAATCAAACATTACGGCACGGCCGGCGTGACGGCTTTAGCCAT GACATTCGGGCAGAGCGCAG
Downstream 100 bases:
>100_bases CCGGCACCGCGTGTTGTCGCAGCGCTAGCCGTTCATTGCATTGAGCCGGGCGCCGTCGCGAACGGCGTGCCGGCATCGAA CCTCTCCTTGGCTGGCAAGA
Product: putative exopolysaccharide production protein (ExoQ-like) membrane protein
Products: NA
Alternate protein names: Exopolysaccharide Production Protein
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MARPSTTHISAGPRVAASSFDICALIPVVAFAYSSLIQPLIYFGFPPSPGLQGLLESRIENRIFWPALAAIAMIIAAQRL ARGGRLPVPPNIVSLCAYFGFAGASIGWALKPEFAFVRFVQEAMVLTAIVLPALLSNPAVDILRGMFFCFAAGVILNVLL IPGGYASYAQYGAQLVDIGYQGYFSGKNLLGEFSASALLLALHELCYAGHRRVLGLVVAIGAVTLIFISSSKTALGLALL APALAIIVLLFARTLRLSPVLILAALALAYIVMSELAGFSTQRIAYLLTGDSSFTGRTTIWAFTTSEIAQRPLLGWGYQS FWLVGADAPSVTEAPGWVKAMPNSHNGFYDTILELGYVGFALLLVFLAATVHVIGRVMAYDFKRAWVLLSMALFVMIYNG LETLWLRAFDVTWVVFVLVTVEAARYWSRLQQTTQIHQPAAQPPVRPIGTRAMWRPRLGVRL
Sequences:
>Translated_462_residues MARPSTTHISAGPRVAASSFDICALIPVVAFAYSSLIQPLIYFGFPPSPGLQGLLESRIENRIFWPALAAIAMIIAAQRL ARGGRLPVPPNIVSLCAYFGFAGASIGWALKPEFAFVRFVQEAMVLTAIVLPALLSNPAVDILRGMFFCFAAGVILNVLL IPGGYASYAQYGAQLVDIGYQGYFSGKNLLGEFSASALLLALHELCYAGHRRVLGLVVAIGAVTLIFISSSKTALGLALL APALAIIVLLFARTLRLSPVLILAALALAYIVMSELAGFSTQRIAYLLTGDSSFTGRTTIWAFTTSEIAQRPLLGWGYQS FWLVGADAPSVTEAPGWVKAMPNSHNGFYDTILELGYVGFALLLVFLAATVHVIGRVMAYDFKRAWVLLSMALFVMIYNG LETLWLRAFDVTWVVFVLVTVEAARYWSRLQQTTQIHQPAAQPPVRPIGTRAMWRPRLGVRL >Mature_461_residues ARPSTTHISAGPRVAASSFDICALIPVVAFAYSSLIQPLIYFGFPPSPGLQGLLESRIENRIFWPALAAIAMIIAAQRLA RGGRLPVPPNIVSLCAYFGFAGASIGWALKPEFAFVRFVQEAMVLTAIVLPALLSNPAVDILRGMFFCFAAGVILNVLLI PGGYASYAQYGAQLVDIGYQGYFSGKNLLGEFSASALLLALHELCYAGHRRVLGLVVAIGAVTLIFISSSKTALGLALLA PALAIIVLLFARTLRLSPVLILAALALAYIVMSELAGFSTQRIAYLLTGDSSFTGRTTIWAFTTSEIAQRPLLGWGYQSF WLVGADAPSVTEAPGWVKAMPNSHNGFYDTILELGYVGFALLLVFLAATVHVIGRVMAYDFKRAWVLLSMALFVMIYNGL ETLWLRAFDVTWVVFVLVTVEAARYWSRLQQTTQIHQPAAQPPVRPIGTRAMWRPRLGVRL
Specific function: Unknown
COG id: COG3307
COG function: function code M; Lipid A core - O-antigen ligase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50137; Mature: 50006
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPSTTHISAGPRVAASSFDICALIPVVAFAYSSLIQPLIYFGFPPSPGLQGLLESRIE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH NRIFWPALAAIAMIIAAQRLARGGRLPVPPNIVSLCAYFGFAGASIGWALKPEFAFVRFV CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH QEAMVLTAIVLPALLSNPAVDILRGMFFCFAAGVILNVLLIPGGYASYAQYGAQLVDIGY HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHEEECC QGYFSGKNLLGEFSASALLLALHELCYAGHRRVLGLVVAIGAVTLIFISSSKTALGLALL CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH APALAIIVLLFARTLRLSPVLILAALALAYIVMSELAGFSTQRIAYLLTGDSSFTGRTTI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCEEE WAFTTSEIAQRPLLGWGYQSFWLVGADAPSVTEAPGWVKAMPNSHNGFYDTILELGYVGF EEEEHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHEECCCCCCCHHHHHHHHHHHHH ALLLVFLAATVHVIGRVMAYDFKRAWVLLSMALFVMIYNGLETLWLRAFDVTWVVFVLVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEAARYWSRLQQTTQIHQPAAQPPVRPIGTRAMWRPRLGVRL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCC >Mature Secondary Structure ARPSTTHISAGPRVAASSFDICALIPVVAFAYSSLIQPLIYFGFPPSPGLQGLLESRIE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH NRIFWPALAAIAMIIAAQRLARGGRLPVPPNIVSLCAYFGFAGASIGWALKPEFAFVRFV CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH QEAMVLTAIVLPALLSNPAVDILRGMFFCFAAGVILNVLLIPGGYASYAQYGAQLVDIGY HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHEEECC QGYFSGKNLLGEFSASALLLALHELCYAGHRRVLGLVVAIGAVTLIFISSSKTALGLALL CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH APALAIIVLLFARTLRLSPVLILAALALAYIVMSELAGFSTQRIAYLLTGDSSFTGRTTI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCEEE WAFTTSEIAQRPLLGWGYQSFWLVGADAPSVTEAPGWVKAMPNSHNGFYDTILELGYVGF EEEEHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHEECCCCCCCHHHHHHHHHHHHH ALLLVFLAATVHVIGRVMAYDFKRAWVLLSMALFVMIYNGLETLWLRAFDVTWVVFVLVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEAARYWSRLQQTTQIHQPAAQPPVRPIGTRAMWRPRLGVRL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA