Click here to switch to the map view.

The map label for this gene is ycdQ [C]

Identifier: 146341712

GI number: 146341712

Start: 5019072

End: 5020022

Strand: Direct

Name: ycdQ [C]

Synonym: BRADO4817

Alternate gene names: 146341712

Gene position: 5019072-5020022 (Clockwise)

Preceding gene: 146341710

Following gene: 146341713

Centisome position: 67.31

GC content: 65.09

Gene sequence:

>951_bases
GTGACGCCATCGCGCCGCTACCTGTTGATCTCGCCCTGCCGGGACGAGGCACAATATCTCCGCCGGACCCTGGACAGCGT
CGCAGCCCAATCGGTGCCGCCGGCGGTTTGGATCGTTGTGGACGACGGCTCGACCGACGAGACGCCCGCCATTCTCGACG
AATATGCGCGGCGGCTGCCCTATCTGCGCGTCGTGCGCCGTGCCGATCGCGGCGGGCGCAAGGTCGGTCCCGGGGTGATC
GAGGCCTTTTACGCCGGACTCGAGACCGTGCGGCTGGAAGATTTCGACTATGTCTGCAAGCTCGATATGGATCTCGACCT
GCCCGCGCGCTACTTCGAATTGCTGATGGAGCGCATGGAGGGAGATCCGCGCGTCGGGACCACCTCAGGCAAGCCATGGT
TCGTGCATCCGCAGACAGGCGCCTTGGAGCCGGAGGTCTGCGGCGACGAGATGTCGGTCGGCATGACCAAGTTCTACCGT
GTCGCCTGCTTCAAGGAGATCGGCGGCTTCGTCCGCGAGGTCATGTGGGACGGCATCGATTGCCACCGCTGCCGCATGCT
CGGCTGGATCGCCGAGAGCACGGACGCCGAAGCGCTGCGCTTTGTCCACCTGCGGCCGCAGGGTGCAAGTCACAAGGGCA
TCTGGACGGGCCGCCTGCGCAAGGGCTTTGGCCAGTATTTCATGGGCACCTCGCCGCTCTATCATGTGGCCGTCGCAGTC
TATCATCTGCCAGCCTATCCCGCGCTGATCGGCAGCGCAGCGATGCTGTGGGGCTACTTTCGAAGCTGGCTGAAAGGTCT
GCCACGCTACGACGACGTCGAGTTCCGGCGCTTCCTCCGCGCCTATCAGCGCGCCTGCCTGCGCCTCGGAAAACGTGCTG
CGACGGCGCGCATCAATGCCGAGCGGGCTCAGCTTTGGCAGGCGAGCCATCCCCTCACAGACAGCAGGTAA

Upstream 100 bases:

>100_bases
TTAAATCAGGATTTAATTTATTGAAAGACGCCGATGCCGCCAGCGGTTTGCCGGGAGCATTTGCGACCGGACCGCGGCCT
TCCGCAAAGGGATTTGAGAC

Downstream 100 bases:

>100_bases
TCATCCCACAACCGATTTTCGAACATCCCTGAAGCGATCTTTTGCAAAGCAAGTCTTTCTCCGACCTCATCGATTGGGCA
CCATGGCCAAAATTCTCCCT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyltransferase; Family Glycosyltransferase; Glycosyltransferase Family 2 Domain Protein; Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MTPSRRYLLISPCRDEAQYLRRTLDSVAAQSVPPAVWIVVDDGSTDETPAILDEYARRLPYLRVVRRADRGGRKVGPGVI
EAFYAGLETVRLEDFDYVCKLDMDLDLPARYFELLMERMEGDPRVGTTSGKPWFVHPQTGALEPEVCGDEMSVGMTKFYR
VACFKEIGGFVREVMWDGIDCHRCRMLGWIAESTDAEALRFVHLRPQGASHKGIWTGRLRKGFGQYFMGTSPLYHVAVAV
YHLPAYPALIGSAAMLWGYFRSWLKGLPRYDDVEFRRFLRAYQRACLRLGKRAATARINAERAQLWQASHPLTDSR

Sequences:

>Translated_316_residues
MTPSRRYLLISPCRDEAQYLRRTLDSVAAQSVPPAVWIVVDDGSTDETPAILDEYARRLPYLRVVRRADRGGRKVGPGVI
EAFYAGLETVRLEDFDYVCKLDMDLDLPARYFELLMERMEGDPRVGTTSGKPWFVHPQTGALEPEVCGDEMSVGMTKFYR
VACFKEIGGFVREVMWDGIDCHRCRMLGWIAESTDAEALRFVHLRPQGASHKGIWTGRLRKGFGQYFMGTSPLYHVAVAV
YHLPAYPALIGSAAMLWGYFRSWLKGLPRYDDVEFRRFLRAYQRACLRLGKRAATARINAERAQLWQASHPLTDSR
>Mature_315_residues
TPSRRYLLISPCRDEAQYLRRTLDSVAAQSVPPAVWIVVDDGSTDETPAILDEYARRLPYLRVVRRADRGGRKVGPGVIE
AFYAGLETVRLEDFDYVCKLDMDLDLPARYFELLMERMEGDPRVGTTSGKPWFVHPQTGALEPEVCGDEMSVGMTKFYRV
ACFKEIGGFVREVMWDGIDCHRCRMLGWIAESTDAEALRFVHLRPQGASHKGIWTGRLRKGFGQYFMGTSPLYHVAVAVY
HLPAYPALIGSAAMLWGYFRSWLKGLPRYDDVEFRRFLRAYQRACLRLGKRAATARINAERAQLWQASHPLTDSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787259, Length=239, Percent_Identity=26.7782426778243, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36053; Mature: 35922

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSRRYLLISPCRDEAQYLRRTLDSVAAQSVPPAVWIVVDDGSTDETPAILDEYARRLP
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCH
YLRVVRRADRGGRKVGPGVIEAFYAGLETVRLEDFDYVCKLDMDLDLPARYFELLMERME
HHHHHHHHHCCCCCCCHHHHHHHHHCHHHEEECCCCEEEEECCCCCCCHHHHHHHHHHHC
GDPRVGTTSGKPWFVHPQTGALEPEVCGDEMSVGMTKFYRVACFKEIGGFVREVMWDGID
CCCCCCCCCCCCEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
CHRCRMLGWIAESTDAEALRFVHLRPQGASHKGIWTGRLRKGFGQYFMGTSPLYHVAVAV
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHH
YHLPAYPALIGSAAMLWGYFRSWLKGLPRYDDVEFRRFLRAYQRACLRLGKRAATARINA
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ERAQLWQASHPLTDSR
HHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TPSRRYLLISPCRDEAQYLRRTLDSVAAQSVPPAVWIVVDDGSTDETPAILDEYARRLP
CCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCH
YLRVVRRADRGGRKVGPGVIEAFYAGLETVRLEDFDYVCKLDMDLDLPARYFELLMERME
HHHHHHHHHCCCCCCCHHHHHHHHHCHHHEEECCCCEEEEECCCCCCCHHHHHHHHHHHC
GDPRVGTTSGKPWFVHPQTGALEPEVCGDEMSVGMTKFYRVACFKEIGGFVREVMWDGID
CCCCCCCCCCCCEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
CHRCRMLGWIAESTDAEALRFVHLRPQGASHKGIWTGRLRKGFGQYFMGTSPLYHVAVAV
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHH
YHLPAYPALIGSAAMLWGYFRSWLKGLPRYDDVEFRRFLRAYQRACLRLGKRAATARINA
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ERAQLWQASHPLTDSR
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA