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The map label for this gene is rbsC [H]

Identifier: 146341686

GI number: 146341686

Start: 4987403

End: 4988383

Strand: Direct

Name: rbsC [H]

Synonym: BRADO4791

Alternate gene names: 146341686

Gene position: 4987403-4988383 (Clockwise)

Preceding gene: 146341685

Following gene: 146341697

Centisome position: 66.89

GC content: 67.28

Gene sequence:

>981_bases
ATGAGCGACGCAACGGCAACCCGGCCGGTCGCTCGCGGGATAGGCTGGCTGCGGCGAATCGATCCGGCGGTGGCGGCCTC
GTTCGGCTGCATCCTGCTGCTGCTGCTCGTCGGCAGCCTCTACTCGCGCAGCTTCCTGTCGCCGGACTATCTGCTGCAGC
AGCTGAAGGTCGCGAGCTTTCTCGGCGTGATCGCCACCGGCATGATGCTGGTGATCCTGCTCGGCCAGATCGATCTCTCG
GTGCCCTGGGTCGTTACGACAGGCGCGATGATGGCCTGCGCCGCCGCGGCGCATGGCACGACCGGCGCCATCCTCGCGAT
CCCCTTCGGCATCCTCTGTGGCGCCGCCATCGGTCTGCTCAACGGCATCGGCGTCGCCTATTTGCGCATTCCCTCGATGA
TCATCACGCTGGCCGCCAACGCGGTCGCGCAAGGCCTGATGGTCGCCTACACCGGCGGCTTCTCGCCGCAGGATTCCGCC
TCCAGGGCGATGCGCTATCTCGCCACCGGAACGGCCGTTCCCGGCCTTCCGAATGCGGTGCTCGCCTGGGCGATCATCGG
AGCCGCCGCGGTCTGGCTGCTGTCTCGCACCACCTTCGGCCGCGCCATCTATGCCATCGGCAACCGCGAGCGCGCCGCGT
ATCTCTCCGGCATCGATACGCGCCGGATCACGATGCTGGCGTTCATGCTGTCGGGCGCCCTCTCTGCCTTCGGCGGCGTG
CTGCTCGCCGGCTACGCCTCGAAGGCGGCGCAGTCGATGGGCGATGCCTATCTGCTGCCGTCGATTGCCGCGGTCGTGCT
CGGCGGCACACATATCCTCGGCGGCCGCGGCAGCTATCTCGGCACCATCGCCGGGGTCATCCTGATCACGCTGCTGCAGT
CGATCCTCTCGGTGATGCAGATCAGCGAGGCCGGCCGCCAGCTGATCTATGGCGCGGTGATCATCCTGATGCTGCTGATC
TACGGCCGCCAAAAGGAGTGA

Upstream 100 bases:

>100_bases
CGCTCTGGCAGCCGCTGTTCCAGGGCCTGGTGCTGATGCTCGCGGTCTCGATTGGCGCGTTCGGGCTGCTGCGCGTGCGC
AATCGACTGGAGTGGTTCGG

Downstream 100 bases:

>100_bases
TCAGCGCGACGACGCTCGCGGAGCCTGCGCTGAACTCTACAGCTGCGCCTCGAAAGCCTCGCGCTCGGCGCGGGTCAGGT
GCAGGCCGTGCTTGGTCCGG

Product: putative sugar ABC transporter permease ribose ABC transporter rbsC-like

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MSDATATRPVARGIGWLRRIDPAVAASFGCILLLLLVGSLYSRSFLSPDYLLQQLKVASFLGVIATGMMLVILLGQIDLS
VPWVVTTGAMMACAAAAHGTTGAILAIPFGILCGAAIGLLNGIGVAYLRIPSMIITLAANAVAQGLMVAYTGGFSPQDSA
SRAMRYLATGTAVPGLPNAVLAWAIIGAAAVWLLSRTTFGRAIYAIGNRERAAYLSGIDTRRITMLAFMLSGALSAFGGV
LLAGYASKAAQSMGDAYLLPSIAAVVLGGTHILGGRGSYLGTIAGVILITLLQSILSVMQISEAGRQLIYGAVIILMLLI
YGRQKE

Sequences:

>Translated_326_residues
MSDATATRPVARGIGWLRRIDPAVAASFGCILLLLLVGSLYSRSFLSPDYLLQQLKVASFLGVIATGMMLVILLGQIDLS
VPWVVTTGAMMACAAAAHGTTGAILAIPFGILCGAAIGLLNGIGVAYLRIPSMIITLAANAVAQGLMVAYTGGFSPQDSA
SRAMRYLATGTAVPGLPNAVLAWAIIGAAAVWLLSRTTFGRAIYAIGNRERAAYLSGIDTRRITMLAFMLSGALSAFGGV
LLAGYASKAAQSMGDAYLLPSIAAVVLGGTHILGGRGSYLGTIAGVILITLLQSILSVMQISEAGRQLIYGAVIILMLLI
YGRQKE
>Mature_325_residues
SDATATRPVARGIGWLRRIDPAVAASFGCILLLLLVGSLYSRSFLSPDYLLQQLKVASFLGVIATGMMLVILLGQIDLSV
PWVVTTGAMMACAAAAHGTTGAILAIPFGILCGAAIGLLNGIGVAYLRIPSMIITLAANAVAQGLMVAYTGGFSPQDSAS
RAMRYLATGTAVPGLPNAVLAWAIIGAAAVWLLSRTTFGRAIYAIGNRERAAYLSGIDTRRITMLAFMLSGALSAFGGVL
LAGYASKAAQSMGDAYLLPSIAAVVLGGTHILGGRGSYLGTIAGVILITLLQSILSVMQISEAGRQLIYGAVIILMLLIY
GRQKE

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=326, Percent_Identity=31.5950920245399, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1788896, Length=296, Percent_Identity=31.4189189189189, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI87082395, Length=274, Percent_Identity=33.5766423357664, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI145693152, Length=280, Percent_Identity=30.3571428571429, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1789992, Length=392, Percent_Identity=26.530612244898, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1790524, Length=315, Percent_Identity=26.3492063492064, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787793, Length=292, Percent_Identity=30.4794520547945, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1788471, Length=226, Percent_Identity=34.5132743362832, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787794, Length=129, Percent_Identity=35.6589147286822, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI145693214, Length=258, Percent_Identity=34.8837209302326, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 33711; Mature: 33579

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDATATRPVARGIGWLRRIDPAVAASFGCILLLLLVGSLYSRSFLSPDYLLQQLKVASF
CCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LGVIATGMMLVILLGQIDLSVPWVVTTGAMMACAAAAHGTTGAILAIPFGILCGAAIGLL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
NGIGVAYLRIPSMIITLAANAVAQGLMVAYTGGFSPQDSASRAMRYLATGTAVPGLPNAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHH
LAWAIIGAAAVWLLSRTTFGRAIYAIGNRERAAYLSGIDTRRITMLAFMLSGALSAFGGV
HHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LLAGYASKAAQSMGDAYLLPSIAAVVLGGTHILGGRGSYLGTIAGVILITLLQSILSVMQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHH
ISEAGRQLIYGAVIILMLLIYGRQKE
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDATATRPVARGIGWLRRIDPAVAASFGCILLLLLVGSLYSRSFLSPDYLLQQLKVASF
CCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LGVIATGMMLVILLGQIDLSVPWVVTTGAMMACAAAAHGTTGAILAIPFGILCGAAIGLL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
NGIGVAYLRIPSMIITLAANAVAQGLMVAYTGGFSPQDSASRAMRYLATGTAVPGLPNAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHH
LAWAIIGAAAVWLLSRTTFGRAIYAIGNRERAAYLSGIDTRRITMLAFMLSGALSAFGGV
HHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LLAGYASKAAQSMGDAYLLPSIAAVVLGGTHILGGRGSYLGTIAGVILITLLQSILSVMQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHH
ISEAGRQLIYGAVIILMLLIYGRQKE
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]