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The map label for this gene is rbsC [H]

Identifier: 146341685

GI number: 146341685

Start: 4986426

End: 4987406

Strand: Direct

Name: rbsC [H]

Synonym: BRADO4790

Alternate gene names: 146341685

Gene position: 4986426-4987406 (Clockwise)

Preceding gene: 146341684

Following gene: 146341686

Centisome position: 66.87

GC content: 67.07

Gene sequence:

>981_bases
ATGAGCGAGTGGCGGTACTGGCTCGCCGAGCGGCGCGGCACCCTGCTCGCGATCGGCATCTTCGTCGCGATGTTCCTGAT
CTATGCGACCAATCATCCGGCCGGCTTCAGCGCCAACATGGTGCAGACCGCGTCCAACAAGGCGACCCTGCTCGCCTTCG
TCGCCATGGCGCAGGCGATCGTGGTAATCACCGCCGGCATCGATCTCTCCGTGGGCATGATCCTGACGCTCACCAACTGC
CTTGCTTCCTGGATCGTCGTCGGCACCGCCACCGAGACGGCGCTCGGCGTGATCGGCGTACTCGGCACCGGCATCCTTTG
CGGCATGGTCAACGGCGCGATCGTGATCTTCGGCCGCCTGCAGCCGATCGTCACCACGATCGCCACCGGGGCGATGTACT
ACGGCGTCGCGCTGATGCTGCGCCCCAATCCCGGCGGCTCGGTGAACGAGACGCTGGCGGATGCGCTGACGGGCCGGCTG
TTCGGCGTCGTGCCGACCAGCCTCGTAGCGCTGGCCGCGGCGGCGGTCTTGATCTGGCTGCCCTATAGCCGCTCGACGAT
CGGCCGCGCCGCCTTCGCCACCGGCTCTTCGGAAGTCGCCGCCTACATGTCGGGCGCTCCGGTGCGCGCCGCCAAGTTCA
TGGCCTACACACTCGCCGGCCTGTTGTCGGCGATCGGAGGTCTGTTTCTCACGTTCTTCTCGTACACCGGCGAAGCGGCC
CATGCGAGCGGCAACGCCTATACGCTGTTCTCGATCGCGGCCGTCGTGCTCGGCGGCGTCTCGCTGATGGGCGGACGCGG
CAGCGCCATCGGCGCGATCTTCGGCGCGCTCGCCTTCCGCACGATCGGCGATCTGCTTTTCGTGTTCGACTTCGATCCGC
TCTGGCAGCCGCTGTTCCAGGGCCTGGTGCTGATGCTCGCGGTCTCGATTGGCGCGTTCGGGCTGCTGCGCGTGCGCAAT
CGACTGGAGTGGTTCGGATGA

Upstream 100 bases:

>100_bases
CTGTCAGGCGCGAGCTCGCGGGCGCCGAGATCACCGAGCGCGCGCTGGTCAGCAGCGCCCTCAATGTCGATGATGGCGAA
CCGGCGAAAGCGAGCGCGCC

Downstream 100 bases:

>100_bases
GCGACGCAACGGCAACCCGGCCGGTCGCTCGCGGGATAGGCTGGCTGCGGCGAATCGATCCGGCGGTGGCGGCCTCGTTC
GGCTGCATCCTGCTGCTGCT

Product: putative sugar ABC transporter permease ribose ABC transporter rbsC-like

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MSEWRYWLAERRGTLLAIGIFVAMFLIYATNHPAGFSANMVQTASNKATLLAFVAMAQAIVVITAGIDLSVGMILTLTNC
LASWIVVGTATETALGVIGVLGTGILCGMVNGAIVIFGRLQPIVTTIATGAMYYGVALMLRPNPGGSVNETLADALTGRL
FGVVPTSLVALAAAAVLIWLPYSRSTIGRAAFATGSSEVAAYMSGAPVRAAKFMAYTLAGLLSAIGGLFLTFFSYTGEAA
HASGNAYTLFSIAAVVLGGVSLMGGRGSAIGAIFGALAFRTIGDLLFVFDFDPLWQPLFQGLVLMLAVSIGAFGLLRVRN
RLEWFG

Sequences:

>Translated_326_residues
MSEWRYWLAERRGTLLAIGIFVAMFLIYATNHPAGFSANMVQTASNKATLLAFVAMAQAIVVITAGIDLSVGMILTLTNC
LASWIVVGTATETALGVIGVLGTGILCGMVNGAIVIFGRLQPIVTTIATGAMYYGVALMLRPNPGGSVNETLADALTGRL
FGVVPTSLVALAAAAVLIWLPYSRSTIGRAAFATGSSEVAAYMSGAPVRAAKFMAYTLAGLLSAIGGLFLTFFSYTGEAA
HASGNAYTLFSIAAVVLGGVSLMGGRGSAIGAIFGALAFRTIGDLLFVFDFDPLWQPLFQGLVLMLAVSIGAFGLLRVRN
RLEWFG
>Mature_325_residues
SEWRYWLAERRGTLLAIGIFVAMFLIYATNHPAGFSANMVQTASNKATLLAFVAMAQAIVVITAGIDLSVGMILTLTNCL
ASWIVVGTATETALGVIGVLGTGILCGMVNGAIVIFGRLQPIVTTIATGAMYYGVALMLRPNPGGSVNETLADALTGRLF
GVVPTSLVALAAAAVLIWLPYSRSTIGRAAFATGSSEVAAYMSGAPVRAAKFMAYTLAGLLSAIGGLFLTFFSYTGEAAH
ASGNAYTLFSIAAVVLGGVSLMGGRGSAIGAIFGALAFRTIGDLLFVFDFDPLWQPLFQGLVLMLAVSIGAFGLLRVRNR
LEWFG

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=311, Percent_Identity=31.5112540192926, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1788896, Length=303, Percent_Identity=30.6930693069307, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1790524, Length=307, Percent_Identity=23.7785016286645, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI145693152, Length=199, Percent_Identity=30.6532663316583, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1789992, Length=126, Percent_Identity=37.3015873015873, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI145693214, Length=250, Percent_Identity=30.8, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787794, Length=247, Percent_Identity=28.3400809716599, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787793, Length=272, Percent_Identity=30.1470588235294, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87082395, Length=270, Percent_Identity=25.1851851851852, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 33944; Mature: 33813

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEWRYWLAERRGTLLAIGIFVAMFLIYATNHPAGFSANMVQTASNKATLLAFVAMAQAI
CCCHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHH
VVITAGIDLSVGMILTLTNCLASWIVVGTATETALGVIGVLGTGILCGMVNGAIVIFGRL
HHEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECH
QPIVTTIATGAMYYGVALMLRPNPGGSVNETLADALTGRLFGVVPTSLVALAAAAVLIWL
HHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PYSRSTIGRAAFATGSSEVAAYMSGAPVRAAKFMAYTLAGLLSAIGGLFLTFFSYTGEAA
CCCCCHHCHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HASGNAYTLFSIAAVVLGGVSLMGGRGSAIGAIFGALAFRTIGDLLFVFDFDPLWQPLFQ
CCCCCCHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHH
GLVLMLAVSIGAFGLLRVRNRLEWFG
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEWRYWLAERRGTLLAIGIFVAMFLIYATNHPAGFSANMVQTASNKATLLAFVAMAQAI
CCHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHH
VVITAGIDLSVGMILTLTNCLASWIVVGTATETALGVIGVLGTGILCGMVNGAIVIFGRL
HHEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECH
QPIVTTIATGAMYYGVALMLRPNPGGSVNETLADALTGRLFGVVPTSLVALAAAAVLIWL
HHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PYSRSTIGRAAFATGSSEVAAYMSGAPVRAAKFMAYTLAGLLSAIGGLFLTFFSYTGEAA
CCCCCHHCHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HASGNAYTLFSIAAVVLGGVSLMGGRGSAIGAIFGALAFRTIGDLLFVFDFDPLWQPLFQ
CCCCCCHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHH
GLVLMLAVSIGAFGLLRVRNRLEWFG
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]