Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is fct [H]

Identifier: 146341636

GI number: 146341636

Start: 4930199

End: 4932577

Strand: Direct

Name: fct [H]

Synonym: BRADO4739

Alternate gene names: 146341636

Gene position: 4930199-4932577 (Clockwise)

Preceding gene: 146341634

Following gene: 146341637

Centisome position: 66.12

GC content: 64.86

Gene sequence:

>2379_bases
ATGAGCGCGGGGGATTTCTGGGGTTCAGTGTCGTTGGCGGGTGTGGTGGTGGCGGGTTTCGCAACGATGACCCCTGCCAA
AGCGCAGGACAGGCGGGCCGCAAGCGACACCTTGCTTCCCGACGTGACGGTCGAAGCGCCGCGCCGATCGCCGGCAGCCC
GCCGAACGCCATCGTCGGCACAGACTGTCCCTCCAACGGCGCGGACAGCGCCGCGGCGCGCGACGACGGCATCGCAGGCG
GCTGGTCCGTCCGCTCCCTCCTCCGTCTCGGCCGGAACGCCGCTCAACAGCAACACCGTCCCGGCGGCCGGCAGCCGGCT
CGGCCTCACGGCGCGCGAGGTGCCCGCGGCGGTCGAGGTGGTCGGTAGCGAGACGCTGCGCGAGCAGGGCTACCACACGA
CGGTCGATGCGGTGAAAGGCGCGAGCGGCGTGAGCGCCGGCGATGCGCCGAACGACGTCGGCTATGCGATGCGTGGATTC
CAGGGCAACCAGGTCAACGTGCTCTACAACGGCATCAACATCGGACCGACCGGTTTCACCGCGCTGACGATGGAGACCTT
CAATCTCGACCGCGTCGAGTTTCTCAAGGGCCCCTCCTCCCTGAGTTCGGGCCAGGGCGCCGTGGGCGGCACCATCAATT
TCGTCACCAAGACCCCGCACACCGGGCCGGTGCAGAACGAGGCCTTCGTCGGCTTCGACCAGCGCGGCAGCTTTCGCAGC
GGCTTCGGCTCCGGCGGCAGCACGAGCGTGCAAGAGCTCGACTATCGCTTCGACATCAGCCGGACCAAGGAAGTCGGCTT
CATCGCCGACACCGAGTTCAAGAATGTCCACGTGTCCGGCCAGTTGAACTACCGCCTGTCCGACAGCTTCCGGACCTTCG
TGGCCGCCGAGTTCAAGGACTACAAGGCCAAGCCCTATGAAGGCACGCCGCTGGTGCCGGCAGCCGACAGCGGCACCAAT
GCGACCGCCGGCATCGTCTCGGGCAGCAAGATATCCGCCTACAACGGCAGCACTCTCGACGCCGTCACGATCGACCGCCG
TACGCTGTCGACCAATTACAATGTGGTCGACGGTCACAAGACGATCAAGGAGTCGTGGGTCCGCAGCGGCTTCGAATGGG
ACCTGAACAATGCGGTTACCCTGCGGAGCCAAATCTACAACTACAATGCCAGCCGCGACTGGTACAACAACGAGGTCTCG
GCGTTCAATGCGGACACCAATGTGGTCGACCGCGAGCGCTTCTTCGTCCACCACAACCATGACATCCTCGGCAACCTCAC
CGACGTGACGTGGAACGGAAGCATCTTCGGCCTCGCCAACCGCCTCATTGGCTTGGTCGAGAGCTCACATACCGACTTCA
CGCGGCCCGGCGCGGCGAATTTCTTTCACGACACGGTGCCGCTCGTCGGGTTCGACCGAGGCGTGTTCGGCAGTCTCACA
ACGCAAATGCAGACAGCCACCATCGACAGCGTCGCATTCAACCTCGAGGACCGGCTGAAGCTGACCGACACCTTCGCCCT
CGTCGGCGGCCTCCGCTACAATCCATTCACGCTCGATCGCAATTCAACCGACATGAACGGCGTGGTGAAAAACGGATTCC
CCTATTCGAAGAGCTGGCAGCCGGTCACCGGCCGCATCGGATATACCTGGGAAGCGCTGCCGGGCACGACCTTCTACAGC
CAATATGCAACGGCGACCGATATCTCGGCGGACAGCATCTTTCTGCTGAGCCCAACGCAGAACCTCACGCTCTCGGACTC
CCGCAGCTACGAAACCGGCGTCAAGCAGCTCACCTGGAACGGCCGCGCCGAATGGACCTTCTCGGCGTTCGACATCGCGC
GCCACAACGTCTACAGCGCCCAGGCCGGCCAGCAACTCAATTTCGCCGGCAAGGTGAGGTCGCAGGGCGTCGAGCTCGCC
GCCGCCGTGCGGCCGACGCCGGAGAGCAAGCTATGGGGTAACGTCGCCTATGTCCGCGCGCGCTACGCCGACTATGATCT
CGCCGGCGGCGGCTCCTTCTCCGGCCACACGCCGCCGAACATCCCCGCCGTGATCGTCAATGGCGGCGGCTCCTACCGCT
TCCTCAATCCCGCCTGGTGGCCGGTCGAGCTCGGCTTCTCAGTGCGCCATGTCGGCGACCGCTGGAGCACCGATGCCAAC
ACCGTGAAGCTGCTCGCCTACACCACCGCGGACCTGTTCGCCTTCATCGACCTGCCGAAGGTGCCGCTGTTCGCCACCGC
AACCAGCACCCGTCTCGCCTTTCGCGTCCGCAACGTCACCGACAGGCGCTACGCTGCCTGGAGCGATCCGTTCTATCCCG
ACCAGATCTTCCTCGGCGCGCCCCGCACCTACGAGGTCGAAGCCTCGTTCAAATTCTGA

Upstream 100 bases:

>100_bases
ACGTTACATAATTTGGCAGATCGGCTAACTGTCGTCCTGGTCATCGGGAACATGAGGGGACGCGGAGGCCGGCTGGCCGG
TCACCGTGGTGGGAGTCGAA

Downstream 100 bases:

>100_bases
GGCGGCATGATCCGGGCGCTGATCCCCACGCATCGCTGGCTCAGCATTCCCCTGGCTCCGCTGTTCGTGCTGTGGTTCGC
CACCGGCATCGTGATGCACT

Product: putative TonB-dependent receptor (Outer membrane siderophore receptor)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 792; Mature: 791

Protein sequence:

>792_residues
MSAGDFWGSVSLAGVVVAGFATMTPAKAQDRRAASDTLLPDVTVEAPRRSPAARRTPSSAQTVPPTARTAPRRATTASQA
AGPSAPSSVSAGTPLNSNTVPAAGSRLGLTAREVPAAVEVVGSETLREQGYHTTVDAVKGASGVSAGDAPNDVGYAMRGF
QGNQVNVLYNGINIGPTGFTALTMETFNLDRVEFLKGPSSLSSGQGAVGGTINFVTKTPHTGPVQNEAFVGFDQRGSFRS
GFGSGGSTSVQELDYRFDISRTKEVGFIADTEFKNVHVSGQLNYRLSDSFRTFVAAEFKDYKAKPYEGTPLVPAADSGTN
ATAGIVSGSKISAYNGSTLDAVTIDRRTLSTNYNVVDGHKTIKESWVRSGFEWDLNNAVTLRSQIYNYNASRDWYNNEVS
AFNADTNVVDRERFFVHHNHDILGNLTDVTWNGSIFGLANRLIGLVESSHTDFTRPGAANFFHDTVPLVGFDRGVFGSLT
TQMQTATIDSVAFNLEDRLKLTDTFALVGGLRYNPFTLDRNSTDMNGVVKNGFPYSKSWQPVTGRIGYTWEALPGTTFYS
QYATATDISADSIFLLSPTQNLTLSDSRSYETGVKQLTWNGRAEWTFSAFDIARHNVYSAQAGQQLNFAGKVRSQGVELA
AAVRPTPESKLWGNVAYVRARYADYDLAGGGSFSGHTPPNIPAVIVNGGGSYRFLNPAWWPVELGFSVRHVGDRWSTDAN
TVKLLAYTTADLFAFIDLPKVPLFATATSTRLAFRVRNVTDRRYAAWSDPFYPDQIFLGAPRTYEVEASFKF

Sequences:

>Translated_792_residues
MSAGDFWGSVSLAGVVVAGFATMTPAKAQDRRAASDTLLPDVTVEAPRRSPAARRTPSSAQTVPPTARTAPRRATTASQA
AGPSAPSSVSAGTPLNSNTVPAAGSRLGLTAREVPAAVEVVGSETLREQGYHTTVDAVKGASGVSAGDAPNDVGYAMRGF
QGNQVNVLYNGINIGPTGFTALTMETFNLDRVEFLKGPSSLSSGQGAVGGTINFVTKTPHTGPVQNEAFVGFDQRGSFRS
GFGSGGSTSVQELDYRFDISRTKEVGFIADTEFKNVHVSGQLNYRLSDSFRTFVAAEFKDYKAKPYEGTPLVPAADSGTN
ATAGIVSGSKISAYNGSTLDAVTIDRRTLSTNYNVVDGHKTIKESWVRSGFEWDLNNAVTLRSQIYNYNASRDWYNNEVS
AFNADTNVVDRERFFVHHNHDILGNLTDVTWNGSIFGLANRLIGLVESSHTDFTRPGAANFFHDTVPLVGFDRGVFGSLT
TQMQTATIDSVAFNLEDRLKLTDTFALVGGLRYNPFTLDRNSTDMNGVVKNGFPYSKSWQPVTGRIGYTWEALPGTTFYS
QYATATDISADSIFLLSPTQNLTLSDSRSYETGVKQLTWNGRAEWTFSAFDIARHNVYSAQAGQQLNFAGKVRSQGVELA
AAVRPTPESKLWGNVAYVRARYADYDLAGGGSFSGHTPPNIPAVIVNGGGSYRFLNPAWWPVELGFSVRHVGDRWSTDAN
TVKLLAYTTADLFAFIDLPKVPLFATATSTRLAFRVRNVTDRRYAAWSDPFYPDQIFLGAPRTYEVEASFKF
>Mature_791_residues
SAGDFWGSVSLAGVVVAGFATMTPAKAQDRRAASDTLLPDVTVEAPRRSPAARRTPSSAQTVPPTARTAPRRATTASQAA
GPSAPSSVSAGTPLNSNTVPAAGSRLGLTAREVPAAVEVVGSETLREQGYHTTVDAVKGASGVSAGDAPNDVGYAMRGFQ
GNQVNVLYNGINIGPTGFTALTMETFNLDRVEFLKGPSSLSSGQGAVGGTINFVTKTPHTGPVQNEAFVGFDQRGSFRSG
FGSGGSTSVQELDYRFDISRTKEVGFIADTEFKNVHVSGQLNYRLSDSFRTFVAAEFKDYKAKPYEGTPLVPAADSGTNA
TAGIVSGSKISAYNGSTLDAVTIDRRTLSTNYNVVDGHKTIKESWVRSGFEWDLNNAVTLRSQIYNYNASRDWYNNEVSA
FNADTNVVDRERFFVHHNHDILGNLTDVTWNGSIFGLANRLIGLVESSHTDFTRPGAANFFHDTVPLVGFDRGVFGSLTT
QMQTATIDSVAFNLEDRLKLTDTFALVGGLRYNPFTLDRNSTDMNGVVKNGFPYSKSWQPVTGRIGYTWEALPGTTFYSQ
YATATDISADSIFLLSPTQNLTLSDSRSYETGVKQLTWNGRAEWTFSAFDIARHNVYSAQAGQQLNFAGKVRSQGVELAA
AVRPTPESKLWGNVAYVRARYADYDLAGGGSFSGHTPPNIPAVIVNGGGSYRFLNPAWWPVELGFSVRHVGDRWSTDANT
VKLLAYTTADLFAFIDLPKVPLFATATSTRLAFRVRNVTDRRYAAWSDPFYPDQIFLGAPRTYEVEASFKF

Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 85668; Mature: 85536

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGDFWGSVSLAGVVVAGFATMTPAKAQDRRAASDTLLPDVTVEAPRRSPAARRTPSSA
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCC
QTVPPTARTAPRRATTASQAAGPSAPSSVSAGTPLNSNTVPAAGSRLGLTAREVPAAVEV
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHEEH
VGSETLREQGYHTTVDAVKGASGVSAGDAPNDVGYAMRGFQGNQVNVLYNGINIGPTGFT
HCCHHHHHCCCEEEHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECEEECCCCEE
ALTMETFNLDRVEFLKGPSSLSSGQGAVGGTINFVTKTPHTGPVQNEAFVGFDQRGSFRS
EEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCC
GFGSGGSTSVQELDYRFDISRTKEVGFIADTEFKNVHVSGQLNYRLSDSFRTFVAAEFKD
CCCCCCCCCHHHEEEEECCCCCCCCCEEECCCCCEEEEEEEEEEEECCCHHEEEEEHHHH
YKAKPYEGTPLVPAADSGTNATAGIVSGSKISAYNGSTLDAVTIDRRTLSTNYNVVDGHK
CCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCEEEEEEECCEEECCCCEEECCHH
TIKESWVRSGFEWDLNNAVTLRSQIYNYNASRDWYNNEVSAFNADTNVVDRERFFVHHNH
HHHHHHHHCCCEECCCCEEEEEEHHCCCCCCCCCCCCCCEEEECCCCEEECEEEEEEECC
DILGNLTDVTWNGSIFGLANRLIGLVESSHTDFTRPGAANFFHDTVPLVGFDRGVFGSLT
CEECCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEECCCCCCHHH
TQMQTATIDSVAFNLEDRLKLTDTFALVGGLRYNPFTLDRNSTDMNGVVKNGFPYSKSWQ
HHEEHEEHHHEEECCCCCEEEEEEEHHHCCCCCCCEEECCCCCCCCCEEECCCCCCCCCC
PVTGRIGYTWEALPGTTFYSQYATATDISADSIFLLSPTQNLTLSDSRSYETGVKQLTWN
CCCCCCCEEEECCCCCCHHHHCCCCCCCCCCEEEEECCCCCEEECCCCCHHCCCCEEEEC
GRAEWTFSAFDIARHNVYSAQAGQQLNFAGKVRSQGVELAAAVRPTPESKLWGNVAYVRA
CCCEEEEEHHHHHHCCEECCCCCCCCCCHHHHHCCCEEEEEEECCCCCHHHCCCEEEEEE
RYADYDLAGGGSFSGHTPPNIPAVIVNGGGSYRFLNPAWWPVELGFSVRHVGDRWSTDAN
EECCCEECCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCEEEECCEEEECCCCCCCCCC
TVKLLAYTTADLFAFIDLPKVPLFATATSTRLAFRVRNVTDRRYAAWSDPFYPDQIFLGA
EEEEEEEECCCEEEEECCCCCCEEEEECCCEEEEEEECCCCCCEECCCCCCCCCEEEECC
PRTYEVEASFKF
CCEEEEEEEECC
>Mature Secondary Structure 
SAGDFWGSVSLAGVVVAGFATMTPAKAQDRRAASDTLLPDVTVEAPRRSPAARRTPSSA
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCC
QTVPPTARTAPRRATTASQAAGPSAPSSVSAGTPLNSNTVPAAGSRLGLTAREVPAAVEV
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHEEH
VGSETLREQGYHTTVDAVKGASGVSAGDAPNDVGYAMRGFQGNQVNVLYNGINIGPTGFT
HCCHHHHHCCCEEEHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECEEECCCCEE
ALTMETFNLDRVEFLKGPSSLSSGQGAVGGTINFVTKTPHTGPVQNEAFVGFDQRGSFRS
EEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCC
GFGSGGSTSVQELDYRFDISRTKEVGFIADTEFKNVHVSGQLNYRLSDSFRTFVAAEFKD
CCCCCCCCCHHHEEEEECCCCCCCCCEEECCCCCEEEEEEEEEEEECCCHHEEEEEHHHH
YKAKPYEGTPLVPAADSGTNATAGIVSGSKISAYNGSTLDAVTIDRRTLSTNYNVVDGHK
CCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCEEEEEEECCEEECCCCEEECCHH
TIKESWVRSGFEWDLNNAVTLRSQIYNYNASRDWYNNEVSAFNADTNVVDRERFFVHHNH
HHHHHHHHCCCEECCCCEEEEEEHHCCCCCCCCCCCCCCEEEECCCCEEECEEEEEEECC
DILGNLTDVTWNGSIFGLANRLIGLVESSHTDFTRPGAANFFHDTVPLVGFDRGVFGSLT
CEECCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEECCCCCCHHH
TQMQTATIDSVAFNLEDRLKLTDTFALVGGLRYNPFTLDRNSTDMNGVVKNGFPYSKSWQ
HHEEHEEHHHEEECCCCCEEEEEEEHHHCCCCCCCEEECCCCCCCCCEEECCCCCCCCCC
PVTGRIGYTWEALPGTTFYSQYATATDISADSIFLLSPTQNLTLSDSRSYETGVKQLTWN
CCCCCCCEEEECCCCCCHHHHCCCCCCCCCCEEEEECCCCCEEECCCCCHHCCCCEEEEC
GRAEWTFSAFDIARHNVYSAQAGQQLNFAGKVRSQGVELAAAVRPTPESKLWGNVAYVRA
CCCEEEEEHHHHHHCCEECCCCCCCCCCHHHHHCCCEEEEEEECCCCCHHHCCCEEEEEE
RYADYDLAGGGSFSGHTPPNIPAVIVNGGGSYRFLNPAWWPVELGFSVRHVGDRWSTDAN
EECCCEECCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCEEEECCEEEECCCCCCCCCC
TVKLLAYTTADLFAFIDLPKVPLFATATSTRLAFRVRNVTDRRYAAWSDPFYPDQIFLGA
EEEEEEEECCCEEEEECCCCCCEEEEECCCEEEEEEECCCCCCEECCCCCCCCCEEEECC
PRTYEVEASFKF
CCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8576065 [H]