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The map label for this gene is yiaN [C]

Identifier: 146341624

GI number: 146341624

Start: 4912668

End: 4914269

Strand: Direct

Name: yiaN [C]

Synonym: BRADO4727

Alternate gene names: 146341624

Gene position: 4912668-4914269 (Clockwise)

Preceding gene: 146341623

Following gene: 146341627

Centisome position: 65.88

GC content: 64.23

Gene sequence:

>1602_bases
ATGATTACGCTGGAGATGATGCCGCCGCTGATGTTCGGCGGCCTTGTCGTGGCGATGCTGATCGGCTTCCCGGTGGCGTT
CACGCTCGCCGCCGTCGGCCTGTCGTTCGGCTTCCTCGCCATCCATCTGGGCTTCTTCGACCTCAACTTCCTGCAGGCGA
TCCCGGGCCGCATCTTCGGCAGCGTGCTCGCCAACGACCTCCTGCTCGCGATCCCGTTCTTCACCTTCATGGGCGCGATC
CTGGAGAGATGCGGGCTTGCGGAGGACATGCTGGATTCCATGGGCCAGCTGTTCGGCCCGATCCGCGGCGGCCTCGGCTA
CTCCGTCATCATCGTCGGCTTCATCCTCGGCGCCATCACCGGCACGGTGGCGGCGCAGGTCATCGCCATGGCGATGATCT
CGATGCCGGTCATGATGCGCTACGGCTACAACATGCGCTACATCACCGGCGTGCTCGCGGCCTCCGGCACGATCACGCAA
CTGGTCCCGCCGTCGCTGGTGCTGATCGTGCTGGCCGACCAGCTCGGCAAGTCGGTCGGCGACATGTATCTCGGCGCCTG
GGGCCCCTCGATCTTCCAGGTCGTTCTGTTCGCCGGCTACACCTTCGTTCTAGGCCTCATCAAGCCGAACCACTTGCCGC
CCGTACCGAAAGAGGCACGCACCTTGACCGGCTGGGCGTTGTGGAAGAAGTGCCTGATGGGCATCATCCCCTCCGCCGTC
CTGATCTTCGTGGTGCTTGGCACCATGATGATGGGCCTGGCCACCCCGACCGAAGCCGGCGCCATGGGTGCGGTCGGCGC
CATCGTGCTGGCGGTGATCCACCACAAGGAGTTCACCAAGAAGGACCGCAGCGTCCTGATCGTGGGCGTGGTCGCGGCCG
GCGTCGGCACCATCGTGGCGATGCTCTTCACCGAGAACGTCGTGTTCAAGCTGGCGTTTGCGATCACCTATCTCGCGGTC
GCCTGGCTTGGCATCCGCGCTGTGGCCATCCCCGACCTGCGCGACCTGATCAAGCAGGGCTACGAGACCACCATGCGGAT
CACCTGCATGGTGACCTTCATCCTGATCGGCTCGACCTGCTTCTCGGTGGTGTTCCAGGGCGTGTCCGGCGGCGAGTGGC
TGGAGCACCTCTTGACGTCCCTGCCCGGCGGCGTCTGGGGCTTCCTCATCTTCATCAACGTCTTCATCTTCTTCCTGGCC
TTCTTCCTCGACTTCTTCGAGATCGCCTTCATCATCCTGCCGATGATCGCGCCGATCGCGCAGAAGATCCTGGCCCCGGT
GGTCGGGCCCGAGGCAGCGCTGATCTGGTTCGGCGTGATGCTGTGCGTGAACATGCAGACCTCGTTCCTGCATCCGCCGT
TCGGCTTCGCGCTGTTCTATCTGCGCGGCGTGGCGCCGAAGGAAGTGAAGAGCTCCGACATCTACTGGGGCGCGATGCCG
TGGATCGGCCTGCAGGCGATCATGGTGCTGCTGGTGATCGCCTTCCCGGTCACGGTCACCGGCCTGCTCGACAAGCCGGT
CCAGGTCGACCTCGACAAGGTCAAGATCGAGGTGCCGCAGATCGAGCTGCCGCCGCTGGACTTCGGCCAGCCGAAGCAAT
AA

Upstream 100 bases:

>100_bases
TCGTGATGCTGGCGCTGCAGGGCCTTTCCGAGGTGATCAAGCGCGCGGCGGCGCTGCAGGGTTATGTGACGATCGACGCG
AAATATGAGAGGCCGACGCA

Downstream 100 bases:

>100_bases
CGGCCGGCCGCTCTAGGCGGCGGCCGAAGGTGCCGGAGCGGGCCTGAAGCGCAGCGAGAACTCGGTGCCCCCGCCCGCGA
GGTCGCCCACCATGATGCTG

Product: putative TRAP C4-dicarboxylate transport system permease DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MITLEMMPPLMFGGLVVAMLIGFPVAFTLAAVGLSFGFLAIHLGFFDLNFLQAIPGRIFGSVLANDLLLAIPFFTFMGAI
LERCGLAEDMLDSMGQLFGPIRGGLGYSVIIVGFILGAITGTVAAQVIAMAMISMPVMMRYGYNMRYITGVLAASGTITQ
LVPPSLVLIVLADQLGKSVGDMYLGAWGPSIFQVVLFAGYTFVLGLIKPNHLPPVPKEARTLTGWALWKKCLMGIIPSAV
LIFVVLGTMMMGLATPTEAGAMGAVGAIVLAVIHHKEFTKKDRSVLIVGVVAAGVGTIVAMLFTENVVFKLAFAITYLAV
AWLGIRAVAIPDLRDLIKQGYETTMRITCMVTFILIGSTCFSVVFQGVSGGEWLEHLLTSLPGGVWGFLIFINVFIFFLA
FFLDFFEIAFIILPMIAPIAQKILAPVVGPEAALIWFGVMLCVNMQTSFLHPPFGFALFYLRGVAPKEVKSSDIYWGAMP
WIGLQAIMVLLVIAFPVTVTGLLDKPVQVDLDKVKIEVPQIELPPLDFGQPKQ

Sequences:

>Translated_533_residues
MITLEMMPPLMFGGLVVAMLIGFPVAFTLAAVGLSFGFLAIHLGFFDLNFLQAIPGRIFGSVLANDLLLAIPFFTFMGAI
LERCGLAEDMLDSMGQLFGPIRGGLGYSVIIVGFILGAITGTVAAQVIAMAMISMPVMMRYGYNMRYITGVLAASGTITQ
LVPPSLVLIVLADQLGKSVGDMYLGAWGPSIFQVVLFAGYTFVLGLIKPNHLPPVPKEARTLTGWALWKKCLMGIIPSAV
LIFVVLGTMMMGLATPTEAGAMGAVGAIVLAVIHHKEFTKKDRSVLIVGVVAAGVGTIVAMLFTENVVFKLAFAITYLAV
AWLGIRAVAIPDLRDLIKQGYETTMRITCMVTFILIGSTCFSVVFQGVSGGEWLEHLLTSLPGGVWGFLIFINVFIFFLA
FFLDFFEIAFIILPMIAPIAQKILAPVVGPEAALIWFGVMLCVNMQTSFLHPPFGFALFYLRGVAPKEVKSSDIYWGAMP
WIGLQAIMVLLVIAFPVTVTGLLDKPVQVDLDKVKIEVPQIELPPLDFGQPKQ
>Mature_533_residues
MITLEMMPPLMFGGLVVAMLIGFPVAFTLAAVGLSFGFLAIHLGFFDLNFLQAIPGRIFGSVLANDLLLAIPFFTFMGAI
LERCGLAEDMLDSMGQLFGPIRGGLGYSVIIVGFILGAITGTVAAQVIAMAMISMPVMMRYGYNMRYITGVLAASGTITQ
LVPPSLVLIVLADQLGKSVGDMYLGAWGPSIFQVVLFAGYTFVLGLIKPNHLPPVPKEARTLTGWALWKKCLMGIIPSAV
LIFVVLGTMMMGLATPTEAGAMGAVGAIVLAVIHHKEFTKKDRSVLIVGVVAAGVGTIVAMLFTENVVFKLAFAITYLAV
AWLGIRAVAIPDLRDLIKQGYETTMRITCMVTFILIGSTCFSVVFQGVSGGEWLEHLLTSLPGGVWGFLIFINVFIFFLA
FFLDFFEIAFIILPMIAPIAQKILAPVVGPEAALIWFGVMLCVNMQTSFLHPPFGFALFYLRGVAPKEVKSSDIYWGAMP
WIGLQAIMVLLVIAFPVTVTGLLDKPVQVDLDKVKIEVPQIELPPLDFGQPKQ

Specific function: Unknown

COG id: COG4664

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=272, Percent_Identity=28.3088235294118, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 57532; Mature: 57532

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHEEEECCCEECCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHEEEECCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]