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The map label for this gene is 146341623

Identifier: 146341623

GI number: 146341623

Start: 4912132

End: 4912671

Strand: Direct

Name: 146341623

Synonym: BRADO4726

Alternate gene names: NA

Gene position: 4912132-4912671 (Clockwise)

Preceding gene: 146341621

Following gene: 146341624

Centisome position: 65.88

GC content: 59.81

Gene sequence:

>540_bases
ATGCGCCCCTTGTTGGCAATTAGTACGGCCATCGATCAGCTGAACGAAAAGATCGGCTACGTTTGCAATCTCCTGGTGCT
CCTGGCCTGCCTGGTCAGCGCGATCAACGCGATGATCCGGTACGCCTTCAGCTATTCGTCGAACGGCTGGCTGGAATTGC
AGTGGTACATGTTCGCCCTGCTGGTGATGTTCGGCGCCTCCTACACGTTCCGCCGCAACGAGCATGTCCGGGTGGAGCTG
CTCTATCTCTATCTGTCCGAACGCGGCCAGCTCTGGCTCGACCTGATCGGCACCCTGTTCTTCCTGATCCCGACCTGCCT
GCTGCTGGCCTATCTGTCCTGGCCGTTCTTCATGCAGTCCTATTCGATCAACGAGATGTCCGGCAATGCCGGCGGCCTGT
TGCGCTGGCCGGTCAAATTCGCAATCCCCGCCGGCTTCGTGATGCTGGCGCTGCAGGGCCTTTCCGAGGTGATCAAGCGC
GCGGCGGCGCTGCAGGGTTATGTGACGATCGACGCGAAATATGAGAGGCCGACGCAATGA

Upstream 100 bases:

>100_bases
GCGCCGTCGTGACGACATGCACGTTTTGCGTGATCGCGGGACCATGCCTTCCGAAAGCTTGGGCGTGCTGTCCTGACCGG
CACCCGCAGCGGAGAGAATG

Downstream 100 bases:

>100_bases
TTACGCTGGAGATGATGCCGCCGCTGATGTTCGGCGGCCTTGTCGTGGCGATGCTGATCGGCTTCCCGGTGGCGTTCACG
CTCGCCGCCGTCGGCCTGTC

Product: putative TRAP C4-dicarboxylate transport system subunit DctQ

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transporter Family Protein DctQ Subunit; Tripartite Transporter Small Subunit; TRAP-T Family Tripartite Transporter; C4-Dicarboxylate Transporter Permease; Tripartite ATP-Independent Periplasmic Transporter; TRAP Mannitol/C4-Dicarboxylate Transporter; Permease Component Of C4 Dicarboxylate Transporter; Transmembrane Transporter Component; TRAP C4-Dicarboxylate Transport System DctQ Subunit; TRAP Dicarboxylate Family Transporter DctQ Subunit; TRAP-Type Transporter Small Permease Component; Small Permease Of TRAP-Type Transporter; Trap Dicarboxylate Transporter Dctm Subunit; Trap-Type Transport System Small Permease Component; TRAP Dicarboxylate Transporter; TRAP-Type Large Permease Component; Mannitol Transporter; TRAP Transporter Small Transmembrane Protein; TRAP Transporter DctQ-Like Membrane Protein Family; Triosephosphate Isomerase (TIM; TRAP-Type Transport System Small Permease Component; TRAP Transporter Small Subunit; TRAP Dicarboxylate Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic Protein; Tripartite ATP-Independent Periplasmic; C4-Dicarboxylate Transporter Small Subunit

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MRPLLAISTAIDQLNEKIGYVCNLLVLLACLVSAINAMIRYAFSYSSNGWLELQWYMFALLVMFGASYTFRRNEHVRVEL
LYLYLSERGQLWLDLIGTLFFLIPTCLLLAYLSWPFFMQSYSINEMSGNAGGLLRWPVKFAIPAGFVMLALQGLSEVIKR
AAALQGYVTIDAKYERPTQ

Sequences:

>Translated_179_residues
MRPLLAISTAIDQLNEKIGYVCNLLVLLACLVSAINAMIRYAFSYSSNGWLELQWYMFALLVMFGASYTFRRNEHVRVEL
LYLYLSERGQLWLDLIGTLFFLIPTCLLLAYLSWPFFMQSYSINEMSGNAGGLLRWPVKFAIPAGFVMLALQGLSEVIKR
AAALQGYVTIDAKYERPTQ
>Mature_179_residues
MRPLLAISTAIDQLNEKIGYVCNLLVLLACLVSAINAMIRYAFSYSSNGWLELQWYMFALLVMFGASYTFRRNEHVRVEL
LYLYLSERGQLWLDLIGTLFFLIPTCLLLAYLSWPFFMQSYSINEMSGNAGGLLRWPVKFAIPAGFVMLALQGLSEVIKR
AAALQGYVTIDAKYERPTQ

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20387; Mature: 20387

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLLAISTAIDQLNEKIGYVCNLLVLLACLVSAINAMIRYAFSYSSNGWLELQWYMFAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH
LVMFGASYTFRRNEHVRVELLYLYLSERGQLWLDLIGTLFFLIPTCLLLAYLSWPFFMQS
HHHHCCCCEEECCCCEEEEHHEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSINEMSGNAGGLLRWPVKFAIPAGFVMLALQGLSEVIKRAAALQGYVTIDAKYERPTQ
CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCC
>Mature Secondary Structure
MRPLLAISTAIDQLNEKIGYVCNLLVLLACLVSAINAMIRYAFSYSSNGWLELQWYMFAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH
LVMFGASYTFRRNEHVRVELLYLYLSERGQLWLDLIGTLFFLIPTCLLLAYLSWPFFMQS
HHHHCCCCEEECCCCEEEEHHEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSINEMSGNAGGLLRWPVKFAIPAGFVMLALQGLSEVIKRAAALQGYVTIDAKYERPTQ
CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA