| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341566
Identifier: 146341566
GI number: 146341566
Start: 4857282
End: 4858961
Strand: Direct
Name: 146341566
Synonym: BRADO4667
Alternate gene names: NA
Gene position: 4857282-4858961 (Clockwise)
Preceding gene: 146341563
Following gene: 146341567
Centisome position: 65.14
GC content: 65.3
Gene sequence:
>1680_bases ATGAGCGTTTCCGAGCTTCGCGCGACAGTGGGCCGCTTCATCAGCATTCGCTGCCCCAGCGCCACGATCATTGCGATCAT CACCGAGGTCACCAGCGAAGACCTGTCGCATGCGGACGAATTTGTCGCGACGGCCTCGGTCGACCTTCTCGGCGAGATCC TGGGCCCAGCGGAAAAGCCCAAGTTCCAGCGCGGCGTCACCCACTACCCCACGATTGGCGACGCCGTCGACATGATCACC AGCCAGGAGCTGCGGACGATCTACACGCCCACGGCCGGCGACCACATCGATATCGGCGCGCTGCAGCAGGACCCGTCCGT GCGCGCCTGCGTCAATGTCGAGGAGATGCTGTCGAAACACTTTGCCGTGCTGGGCTCGACCGGCGTCGGTAAATCGACCG GCGTGTCGCTGCTGCTGAACGAGATCCTCAAGGCGCGGCCGAACCTGCGCATCTTCCTGCTCGACGTCCACAACGAGTAT GGCCGCTGCTTCGGCGAGCGCGCGCTGGTCTTGAATCCGCGCAACCTGAAACTGCCGTTCTGGCTGTTCAATTTTGAGGA GATCGTCGACGTCCTGTTCGGCGGCCGCCCCGGCGTGCCGGAGGAACTCGACATTCTCGCCGAGGTGATCCCGCTGGCGA AGGGCATCTACACCCAGTACCAGAACTCCGACCGCATCGGCCTCAAGCGCATCGACCCGAAGACGATCGGCTACACCGTC GATACGCCCGTGCCCTACCGCCTCGTCGACCTGATCAACCTGATCGACGAGCGCATGGGAAAGCTCGAGAACCGCTCCTC GCGCATCATCTATCACAAGCTGATCTCGCGCATCGAGACGGTGCGCAACGACCCGCGCTACGCCTTCATGTTCGACAACG CGAATGTGGGTGGCGACACCATGGCCGAGGTCATCAGCCACCTGTTCCGGCTGCCCGCCAATGGCCGGCCGATGACGGTC ATGCAGCTCGCCGGCTTCCCGGCCGAGGTGGTCGACTCCGTGGTCTCCGTCGTGTGCCGCATGGCCTTCGATTTCGGCCT GTGGAGCGACGGCGTCTCGCCACTCTTGTTCGTCTGCGAGGAAGCGCACCGCTACGCCTCTGCCGACCGCTCGATCGGTT TCGGCCCAACCCGCAAGGCGATCTCGCGCATCGCCAAGGAAGGCCGCAAATATGGCGTCTATCTCGGCCTGGTGACCCAG CGACCGGCCGAGCTGGACTCCACCATCATTTCCCAGTGCAACACGCTCTTCACGATGCGCCTCGCCAACGAGCGCGACCA GTCGCTGCTGCGCTCGGCGGTCTCCGACGCCGCCGCCAATCTGCTCTCCTTCGTCCCCTCGCTCGGCACCCGCGAGGTGC TGGCCTTCGGTGAGGGCGTGGCATTGCCGACGCGGCTTCGCTTCAAGGAAGTGCCGCTGCATCAGCTGCCGCGCAGCGAG GCGACCATTGCGACCGTCCGCTCGGTCAACGCCGGCCACGACATGCATTTCGTCAGCGCCGTGCTGGAGCGGTGGCGCGG CGCGACCTCGAGCCGCGAGGCCTCGAACGGCGATGGCGGCATGAACAATGTCGGCGATCGCAGCGTCGGGCTCGCGACGG CACTGGACGCGCCCATGTTGCAGCCGTCGCTCGGTCTGGACCCCGACCGCTTTTCCCTGCTGAAGAAGCCGCTGCGCTGA
Upstream 100 bases:
>100_bases ACAATTCACCACAGGTTTCATGACCGTGACATCCTTCGGACGTGTGATCTCGGTTCGAGGCTCTCAGGCCCGCGTCGGCA TTCTGCTGCAGGCGAAGCAG
Downstream 100 bases:
>100_bases GCTGAAGACCGCTTCGCGCCGATCGCGGTTGGGAACCGGCTGCGGCGCAGCCGGATCCAAAACTCCCATCACAAAGATGT TCGACCCGATCGATTGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 559; Mature: 558
Protein sequence:
>559_residues MSVSELRATVGRFISIRCPSATIIAIITEVTSEDLSHADEFVATASVDLLGEILGPAEKPKFQRGVTHYPTIGDAVDMIT SQELRTIYTPTAGDHIDIGALQQDPSVRACVNVEEMLSKHFAVLGSTGVGKSTGVSLLLNEILKARPNLRIFLLDVHNEY GRCFGERALVLNPRNLKLPFWLFNFEEIVDVLFGGRPGVPEELDILAEVIPLAKGIYTQYQNSDRIGLKRIDPKTIGYTV DTPVPYRLVDLINLIDERMGKLENRSSRIIYHKLISRIETVRNDPRYAFMFDNANVGGDTMAEVISHLFRLPANGRPMTV MQLAGFPAEVVDSVVSVVCRMAFDFGLWSDGVSPLLFVCEEAHRYASADRSIGFGPTRKAISRIAKEGRKYGVYLGLVTQ RPAELDSTIISQCNTLFTMRLANERDQSLLRSAVSDAAANLLSFVPSLGTREVLAFGEGVALPTRLRFKEVPLHQLPRSE ATIATVRSVNAGHDMHFVSAVLERWRGATSSREASNGDGGMNNVGDRSVGLATALDAPMLQPSLGLDPDRFSLLKKPLR
Sequences:
>Translated_559_residues MSVSELRATVGRFISIRCPSATIIAIITEVTSEDLSHADEFVATASVDLLGEILGPAEKPKFQRGVTHYPTIGDAVDMIT SQELRTIYTPTAGDHIDIGALQQDPSVRACVNVEEMLSKHFAVLGSTGVGKSTGVSLLLNEILKARPNLRIFLLDVHNEY GRCFGERALVLNPRNLKLPFWLFNFEEIVDVLFGGRPGVPEELDILAEVIPLAKGIYTQYQNSDRIGLKRIDPKTIGYTV DTPVPYRLVDLINLIDERMGKLENRSSRIIYHKLISRIETVRNDPRYAFMFDNANVGGDTMAEVISHLFRLPANGRPMTV MQLAGFPAEVVDSVVSVVCRMAFDFGLWSDGVSPLLFVCEEAHRYASADRSIGFGPTRKAISRIAKEGRKYGVYLGLVTQ RPAELDSTIISQCNTLFTMRLANERDQSLLRSAVSDAAANLLSFVPSLGTREVLAFGEGVALPTRLRFKEVPLHQLPRSE ATIATVRSVNAGHDMHFVSAVLERWRGATSSREASNGDGGMNNVGDRSVGLATALDAPMLQPSLGLDPDRFSLLKKPLR >Mature_558_residues SVSELRATVGRFISIRCPSATIIAIITEVTSEDLSHADEFVATASVDLLGEILGPAEKPKFQRGVTHYPTIGDAVDMITS QELRTIYTPTAGDHIDIGALQQDPSVRACVNVEEMLSKHFAVLGSTGVGKSTGVSLLLNEILKARPNLRIFLLDVHNEYG RCFGERALVLNPRNLKLPFWLFNFEEIVDVLFGGRPGVPEELDILAEVIPLAKGIYTQYQNSDRIGLKRIDPKTIGYTVD TPVPYRLVDLINLIDERMGKLENRSSRIIYHKLISRIETVRNDPRYAFMFDNANVGGDTMAEVISHLFRLPANGRPMTVM QLAGFPAEVVDSVVSVVCRMAFDFGLWSDGVSPLLFVCEEAHRYASADRSIGFGPTRKAISRIAKEGRKYGVYLGLVTQR PAELDSTIISQCNTLFTMRLANERDQSLLRSAVSDAAANLLSFVPSLGTREVLAFGEGVALPTRLRFKEVPLHQLPRSEA TIATVRSVNAGHDMHFVSAVLERWRGATSSREASNGDGGMNNVGDRSVGLATALDAPMLQPSLGLDPDRFSLLKKPLR
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1429 and MJ1565 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 - InterPro: IPR002789 - InterPro: IPR018538 [H]
Pfam domain/function: PF05872 DUF853; PF01935 DUF87; PF09378 HAS-barrel [H]
EC number: NA
Molecular weight: Translated: 61451; Mature: 61320
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSELRATVGRFISIRCPSATIIAIITEVTSEDLSHADEFVATASVDLLGEILGPAEKP CCHHHHHHHHCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KFQRGVTHYPTIGDAVDMITSQELRTIYTPTAGDHIDIGALQQDPSVRACVNVEEMLSKH HHHCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCEEECCCCCCCCHHHHCCHHHHHHHH FAVLGSTGVGKSTGVSLLLNEILKARPNLRIFLLDVHNEYGRCFGERALVLNPRNLKLPF HHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCEEEECCCCCCCCE WLFNFEEIVDVLFGGRPGVPEELDILAEVIPLAKGIYTQYQNSDRIGLKRIDPKTIGYTV EECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEE DTPVPYRLVDLINLIDERMGKLENRSSRIIYHKLISRIETVRNDPRYAFMFDNANVGGDT CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH MAEVISHLFRLPANGRPMTVMQLAGFPAEVVDSVVSVVCRMAFDFGLWSDGVSPLLFVCE HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH EAHRYASADRSIGFGPTRKAISRIAKEGRKYGVYLGLVTQRPAELDSTIISQCNTLFTMR HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH LANERDQSLLRSAVSDAAANLLSFVPSLGTREVLAFGEGVALPTRLRFKEVPLHQLPRSE HHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHCCCHHHCCCCC ATIATVRSVNAGHDMHFVSAVLERWRGATSSREASNGDGGMNNVGDRSVGLATALDAPML HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC QPSLGLDPDRFSLLKKPLR CCCCCCCHHHHHHHHCCCC >Mature Secondary Structure SVSELRATVGRFISIRCPSATIIAIITEVTSEDLSHADEFVATASVDLLGEILGPAEKP CHHHHHHHHCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KFQRGVTHYPTIGDAVDMITSQELRTIYTPTAGDHIDIGALQQDPSVRACVNVEEMLSKH HHHCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCEEECCCCCCCCHHHHCCHHHHHHHH FAVLGSTGVGKSTGVSLLLNEILKARPNLRIFLLDVHNEYGRCFGERALVLNPRNLKLPF HHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCEEEECCCCCCCCE WLFNFEEIVDVLFGGRPGVPEELDILAEVIPLAKGIYTQYQNSDRIGLKRIDPKTIGYTV EECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEE DTPVPYRLVDLINLIDERMGKLENRSSRIIYHKLISRIETVRNDPRYAFMFDNANVGGDT CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH MAEVISHLFRLPANGRPMTVMQLAGFPAEVVDSVVSVVCRMAFDFGLWSDGVSPLLFVCE HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH EAHRYASADRSIGFGPTRKAISRIAKEGRKYGVYLGLVTQRPAELDSTIISQCNTLFTMR HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH LANERDQSLLRSAVSDAAANLLSFVPSLGTREVLAFGEGVALPTRLRFKEVPLHQLPRSE HHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHCCCHHHCCCCC ATIATVRSVNAGHDMHFVSAVLERWRGATSSREASNGDGGMNNVGDRSVGLATALDAPML HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC QPSLGLDPDRFSLLKKPLR CCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]