| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146341563
Identifier: 146341563
GI number: 146341563
Start: 4854606
End: 4855088
Strand: Direct
Name: 146341563
Synonym: BRADO4664
Alternate gene names: NA
Gene position: 4854606-4855088 (Clockwise)
Preceding gene: 146341562
Following gene: 146341566
Centisome position: 65.1
GC content: 67.49
Gene sequence:
>483_bases ATGTGGTCGCCCGAATTGGAAAGTCCCCGCCGGATGCGCGCACGTCCCTCTGCCCGTCTGCTGGTCGTCGATCCCGACGA TCGGCTGCTGCTGTTCCAGTTCGTTCACATCGCGGGTGCGCTGAAAGGGCAGCAGTTCTGGGCAACACCCGGCGGCGGGC TCGATCCCGGCGAGAGCTACGAGGCGGCGGCGTGCCGGGAGATGTTCGAGGAGACGGGGATCCGCATTGCTCATCCCGGG CCGCAGATCGCGCGCAGGACCGTGAGCTTCACGATGGTCGACGGCGAGCAGGTCAGCTCCGACGAGCGCTACTTCCTCAT CAGGGTCGGCAGCACCGACCTCTCGTCGATGCATTGGACCGAACTGGAGCGTGCGGCGATCGCCGCGCAGCGCTGGTGGC GGCCCGCGGAGCTCGCGGCCACGACCGATCAGGTGTTCCCCGAGGATATCATCGACATGCTGGCGCGCGCCGGAGTCTGG TGA
Upstream 100 bases:
>100_bases CACTCGGCGATGGCGGCTGGACCTTCGTCACTGCAAGGGCTTACGGTGGAGATCAAACAGGCCTGATGAGGCTTGTCCCG GGCAGGCGAGACCGCAATCG
Downstream 100 bases:
>100_bases GGCCGGAATCCGCTAGAGCCGCCCGCCGGCCAGCGCGGCGGCGCGCGGCCGGCCGATGTCGTCCAGCGCGCTCGGCATCG GCGCCACCGGGAACACCGCG
Product: putative NUDIX hydrolase
Products: NA
Alternate protein names: MutT/Nudix-Family Hydrolase; Mutator MutT Protein; MutT/NUDIX Family Hydrolase; Nudix Hydrolase; MutT Protein; MutT-Like Protein; MutT DNA Repair Protein; Hydrolase NUDIX Family
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MWSPELESPRRMRARPSARLLVVDPDDRLLLFQFVHIAGALKGQQFWATPGGGLDPGESYEAAACREMFEETGIRIAHPG PQIARRTVSFTMVDGEQVSSDERYFLIRVGSTDLSSMHWTELERAAIAAQRWWRPAELAATTDQVFPEDIIDMLARAGVW
Sequences:
>Translated_160_residues MWSPELESPRRMRARPSARLLVVDPDDRLLLFQFVHIAGALKGQQFWATPGGGLDPGESYEAAACREMFEETGIRIAHPG PQIARRTVSFTMVDGEQVSSDERYFLIRVGSTDLSSMHWTELERAAIAAQRWWRPAELAATTDQVFPEDIIDMLARAGVW >Mature_160_residues MWSPELESPRRMRARPSARLLVVDPDDRLLLFQFVHIAGALKGQQFWATPGGGLDPGESYEAAACREMFEETGIRIAHPG PQIARRTVSFTMVDGEQVSSDERYFLIRVGSTDLSSMHWTELERAAIAAQRWWRPAELAATTDQVFPEDIIDMLARAGVW
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18045; Mature: 18045
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWSPELESPRRMRARPSARLLVVDPDDRLLLFQFVHIAGALKGQQFWATPGGGLDPGESY CCCCCCCCCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC EAAACREMFEETGIRIAHPGPQIARRTVSFTMVDGEQVSSDERYFLIRVGSTDLSSMHWT HHHHHHHHHHHCCCEEECCCHHHHHHEEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHH ELERAAIAAQRWWRPAELAATTDQVFPEDIIDMLARAGVW HHHHHHHHHHHCCCCHHHHHCCHHCCHHHHHHHHHHCCCC >Mature Secondary Structure MWSPELESPRRMRARPSARLLVVDPDDRLLLFQFVHIAGALKGQQFWATPGGGLDPGESY CCCCCCCCCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC EAAACREMFEETGIRIAHPGPQIARRTVSFTMVDGEQVSSDERYFLIRVGSTDLSSMHWT HHHHHHHHHHHCCCEEECCCHHHHHHEEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHH ELERAAIAAQRWWRPAELAATTDQVFPEDIIDMLARAGVW HHHHHHHHHHHCCCCHHHHHCCHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA