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The map label for this gene is slyA [C]

Identifier: 146341557

GI number: 146341557

Start: 4844204

End: 4844665

Strand: Reverse

Name: slyA [C]

Synonym: BRADO4655

Alternate gene names: 146341557

Gene position: 4844665-4844204 (Counterclockwise)

Preceding gene: 146341561

Following gene: 146341556

Centisome position: 64.97

GC content: 63.64

Gene sequence:

>462_bases
ATGTCGCTGGACGACAGACGTCAGCTGATCGCGCAGCTTGTCGAAAGCTCGCGCATTCTCCGCAACTATATTGATCAGCG
TGCCAAGCAGCGCGGCACAACCCGCGCACAGTGGGTGGTGTTGTTTCGCCTTCGCGCGCAGGAAGGTTTATCACAGGTCG
ATCTCGCAGAAGTGCTGGAACTGCAGCCGATCTCGCTGGTGCGCCTGCTCGACCGGCTCGTCGAGCAGGGTTTGTTGGAG
CGGCGTCACGATCCCAAGGACCGTCGCGCGAATCGACTCTATCTCACCGCGGCTGGCCGCGAGCTCGCCGACAGTCTCGA
CGAGGTGCGCGACGGGATCGCCGCCGACGTGCTGCAGGACATCCCGGACGCGACCGTGACCAGCAGTCTCGCCACCCTGC
GCGCGCTGAAGGATCGCATCAAAGCGCTGTCCGAGGCTAGAACCGGCATCGCGGCCAAATAG

Upstream 100 bases:

>100_bases
ATGCTCGCAATTAATGTGTAAACACACGACAGCTCGGCCGAACCTAAACAATTGGCAAGCTTCGCGGTGCGATCAAAAGA
CTTCACGGGAGGTCACGGCC

Downstream 100 bases:

>100_bases
CCGGGACGTTGTTCTGATCCTGAGTTGTGTCTTCCGGTGAAACATCCTGAGTGCGAGCTGAAGGATGGCGTCGTCGGGCC
TGGATCGTCAGGCAACCAAC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator Protein; MarR-Family Transcriptional Regulator; Transcriptional Regulator SlyA; Transcription Regulator Protein; MarR Family Regulatory Helix-Turn-Helix Protein

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSLDDRRQLIAQLVESSRILRNYIDQRAKQRGTTRAQWVVLFRLRAQEGLSQVDLAEVLELQPISLVRLLDRLVEQGLLE
RRHDPKDRRANRLYLTAAGRELADSLDEVRDGIAADVLQDIPDATVTSSLATLRALKDRIKALSEARTGIAAK

Sequences:

>Translated_153_residues
MSLDDRRQLIAQLVESSRILRNYIDQRAKQRGTTRAQWVVLFRLRAQEGLSQVDLAEVLELQPISLVRLLDRLVEQGLLE
RRHDPKDRRANRLYLTAAGRELADSLDEVRDGIAADVLQDIPDATVTSSLATLRALKDRIKALSEARTGIAAK
>Mature_152_residues
SLDDRRQLIAQLVESSRILRNYIDQRAKQRGTTRAQWVVLFRLRAQEGLSQVDLAEVLELQPISLVRLLDRLVEQGLLER
RHDPKDRRANRLYLTAAGRELADSLDEVRDGIAADVLQDIPDATVTSSLATLRALKDRIKALSEARTGIAAK

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081950, Length=105, Percent_Identity=36.1904761904762, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17280; Mature: 17149

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDDRRQLIAQLVESSRILRNYIDQRAKQRGTTRAQWVVLFRLRAQEGLSQVDLAEVLE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
LQPISLVRLLDRLVEQGLLERRHDPKDRRANRLYLTAAGRELADSLDEVRDGIAADVLQD
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
IPDATVTSSLATLRALKDRIKALSEARTGIAAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLDDRRQLIAQLVESSRILRNYIDQRAKQRGTTRAQWVVLFRLRAQEGLSQVDLAEVLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
LQPISLVRLLDRLVEQGLLERRHDPKDRRANRLYLTAAGRELADSLDEVRDGIAADVLQD
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
IPDATVTSSLATLRALKDRIKALSEARTGIAAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA