| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146341561
Identifier: 146341561
GI number: 146341561
Start: 4852685
End: 4853893
Strand: Reverse
Name: 146341561
Synonym: BRADO4661
Alternate gene names: NA
Gene position: 4853893-4852685 (Counterclockwise)
Preceding gene: 146341564
Following gene: 146341557
Centisome position: 65.1
GC content: 63.61
Gene sequence:
>1209_bases ATGCTGTCGCTCGACCGTGAATTCTGCGCAAGACGACTGCTGGACGTCGATCAGCTGCTCGACCTCGCTCAGGATCGTCT CGGTCCGGTCTCGTTCGGCCCGGAGAGCACCCTGCTTGTCGAGGGGATCAGGTGCCTCGCAGACTCGATCGCGCGCGACT CCGCTTATGACGATCTCGGAAGGTACATGGCGGCGCACTACATCTATGGCTGGATCGAGCGTTACGTTCAGTTCGCGCGG GACCTCTCCGACCTGCCTGATATTTTGCAGGTGCCCGTCACGAGGCCGCTGTTTCTCATCGGCTTCGGCCGCACCGGCAG CACGTTCCTGCATCATCTGCTGGCGCTCGATCCGCAGGCGCGCGCACCCCGTCTGTGGGAGCTGCAGGAGCCGTCACCGC CGCCGCGGCCGGCGAGCTATCAAACCGACGCGCGTATCGGCCGCATGCGCGCACAGTCCGCGTTCCGCGCGGCCGTCATG CCGGACCTGCACAAGATCCACGAGTTCGACGTCGAGGCTCCGGAGGAGTGCCAGCTGATGATGTGGCACGGCCCGCAGCA CATGATCCTCGGGCTCAGGTCGCCGGAGTATTGGCGATGGTTCCGGTCGCTCGCTTCGGCGCAGCTCGACACGCTCTGGG CAGGCTACAAGCGCCAGGTCCAGCATCTGCAGCTGTTTCATCGTGGCGGCCACTGGCTCAGCAAGTCGCTGGCCCACGCC CATTTCCTTCCGGTGCTGTTCGACAGCTTCCCCGATGCACGAATCGTCCGGCTGCATCGCGACCCCTGCCAGATCATTCC GGCGCTTGCGAGCCTGATCGCGCAGCTGCAGATCTCCTACACGCCACGCATCGATTTCGACGATCTTGGTCGTCGAATGC TGGAGCTGTTCGGGCAGTCCATGGACAGGATGATGCAGGCCGACGACGCGGTGAACCCAATGCGGTTCGTTGACATCATC TTCGACGATCTCGTTCAGGATCCGCTGGCAACCATCCGGCGGATTTATGCGACGTTCGGCGACGACTTCGCACCGGAGTT CGAGAGCCGGCTGCTGCGGCGGCTGGAGGCGGAGAGCTCCAGAAACCGGTTCAAGCACGTCTATACGCTCGAGCAGTTCG GACTGTCGTCCAAGCAGGTCATGGAGCGCTCGGAAGGCTACCTGACGTGGGTCGAACAGCGAACGGGCGTCCAGCTGTGT CGCTGCTGA
Upstream 100 bases:
>100_bases AGGAACCATCGACATGCGTCGCGGGGCCGCCGATCCCGACGAGACCCTCGTCGTCGCTCCGGGTCAGCGCTCGCCGAGGG CTGCGCAACTCCTCACCAGG
Downstream 100 bases:
>100_bases TCAGGCGTCGCTATTGCGAAGCACGTCGTGTCAGCATGTCCTCACGGGAGGCGATCGCGGGCGGCGGTGGCGAGCCGGGT CGCTGAAACGTCATCACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MLSLDREFCARRLLDVDQLLDLAQDRLGPVSFGPESTLLVEGIRCLADSIARDSAYDDLGRYMAAHYIYGWIERYVQFAR DLSDLPDILQVPVTRPLFLIGFGRTGSTFLHHLLALDPQARAPRLWELQEPSPPPRPASYQTDARIGRMRAQSAFRAAVM PDLHKIHEFDVEAPEECQLMMWHGPQHMILGLRSPEYWRWFRSLASAQLDTLWAGYKRQVQHLQLFHRGGHWLSKSLAHA HFLPVLFDSFPDARIVRLHRDPCQIIPALASLIAQLQISYTPRIDFDDLGRRMLELFGQSMDRMMQADDAVNPMRFVDII FDDLVQDPLATIRRIYATFGDDFAPEFESRLLRRLEAESSRNRFKHVYTLEQFGLSSKQVMERSEGYLTWVEQRTGVQLC RC
Sequences:
>Translated_402_residues MLSLDREFCARRLLDVDQLLDLAQDRLGPVSFGPESTLLVEGIRCLADSIARDSAYDDLGRYMAAHYIYGWIERYVQFAR DLSDLPDILQVPVTRPLFLIGFGRTGSTFLHHLLALDPQARAPRLWELQEPSPPPRPASYQTDARIGRMRAQSAFRAAVM PDLHKIHEFDVEAPEECQLMMWHGPQHMILGLRSPEYWRWFRSLASAQLDTLWAGYKRQVQHLQLFHRGGHWLSKSLAHA HFLPVLFDSFPDARIVRLHRDPCQIIPALASLIAQLQISYTPRIDFDDLGRRMLELFGQSMDRMMQADDAVNPMRFVDII FDDLVQDPLATIRRIYATFGDDFAPEFESRLLRRLEAESSRNRFKHVYTLEQFGLSSKQVMERSEGYLTWVEQRTGVQLC RC >Mature_402_residues MLSLDREFCARRLLDVDQLLDLAQDRLGPVSFGPESTLLVEGIRCLADSIARDSAYDDLGRYMAAHYIYGWIERYVQFAR DLSDLPDILQVPVTRPLFLIGFGRTGSTFLHHLLALDPQARAPRLWELQEPSPPPRPASYQTDARIGRMRAQSAFRAAVM PDLHKIHEFDVEAPEECQLMMWHGPQHMILGLRSPEYWRWFRSLASAQLDTLWAGYKRQVQHLQLFHRGGHWLSKSLAHA HFLPVLFDSFPDARIVRLHRDPCQIIPALASLIAQLQISYTPRIDFDDLGRRMLELFGQSMDRMMQADDAVNPMRFVDII FDDLVQDPLATIRRIYATFGDDFAPEFESRLLRRLEAESSRNRFKHVYTLEQFGLSSKQVMERSEGYLTWVEQRTGVQLC RC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46588; Mature: 46588
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLDREFCARRLLDVDQLLDLAQDRLGPVSFGPESTLLVEGIRCLADSIARDSAYDDLG CCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH RYMAAHYIYGWIERYVQFARDLSDLPDILQVPVTRPLFLIGFGRTGSTFLHHLLALDPQA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCC RAPRLWELQEPSPPPRPASYQTDARIGRMRAQSAFRAAVMPDLHKIHEFDVEAPEECQLM CCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE MWHGPQHMILGLRSPEYWRWFRSLASAQLDTLWAGYKRQVQHLQLFHRGGHWLSKSLAHA EEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH HFLPVLFDSFPDARIVRLHRDPCQIIPALASLIAQLQISYTPRIDFDDLGRRMLELFGQS HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH MDRMMQADDAVNPMRFVDIIFDDLVQDPLATIRRIYATFGDDFAPEFESRLLRRLEAESS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RNRFKHVYTLEQFGLSSKQVMERSEGYLTWVEQRTGVQLCRC HHHHHHHHHHHHHCCCHHHHHHHCCCCEEEHHHHCCCHHHCC >Mature Secondary Structure MLSLDREFCARRLLDVDQLLDLAQDRLGPVSFGPESTLLVEGIRCLADSIARDSAYDDLG CCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH RYMAAHYIYGWIERYVQFARDLSDLPDILQVPVTRPLFLIGFGRTGSTFLHHLLALDPQA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCC RAPRLWELQEPSPPPRPASYQTDARIGRMRAQSAFRAAVMPDLHKIHEFDVEAPEECQLM CCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE MWHGPQHMILGLRSPEYWRWFRSLASAQLDTLWAGYKRQVQHLQLFHRGGHWLSKSLAHA EEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH HFLPVLFDSFPDARIVRLHRDPCQIIPALASLIAQLQISYTPRIDFDDLGRRMLELFGQS HHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH MDRMMQADDAVNPMRFVDIIFDDLVQDPLATIRRIYATFGDDFAPEFESRLLRRLEAESS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RNRFKHVYTLEQFGLSSKQVMERSEGYLTWVEQRTGVQLCRC HHHHHHHHHHHHHCCCHHHHHHHCCCCEEEHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA