| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is dhaK [H]
Identifier: 146341512
GI number: 146341512
Start: 4798612
End: 4799601
Strand: Reverse
Name: dhaK [H]
Synonym: BRADO4609
Alternate gene names: 146341512
Gene position: 4799601-4798612 (Counterclockwise)
Preceding gene: 146341513
Following gene: 146341510
Centisome position: 64.37
GC content: 66.57
Gene sequence:
>990_bases ATGAAGAAGCTGATCAACGCGGTCGACGATGTGCTGACCGAGAGCCTGCAGGGCTTTGCCGCCATTCATGGCGACATCGT CACGCTCGGCGACGAGAGCAAGTTCGTCCGCCGCAAAAGTCTCAAGCCGGGCAAGGTCGCGCTGATCTCCGGCGGTGGAT CCGGCCATGAGCCGCTGCATGCCGGCTTTGTCGGACAAGGCATGCTGGACGCCGCCTGTCCGGGCCAGGTCTTCACCTCG CCGACGCCCGACCAGATGCTCGCCGCAGCGCAGGCCGTCGAGACCGGCGGCGGCTCGCTGTTCATCGTCAAGAACTACGA AGGCGATGTCATGAATTTCGCGATGGCCGCGGAGATGATGGACGCGAAAGTCGCGACTGTCATCACCGATGACGACGTCG CGGTGGAGACGTCGACCTATTCGACCGGCCGCCGCGGCGTCGCCGGCACGCTCGTCGTCGAAAAGATTCTCGGCGCCGCC GCCGAGCAGGGCCGCGATCTCGACGCGCTGAAGGCGCTCGGCGACGACGTGAACAAGCGCACCCGCTCAATGGGCGTCGC GTTGACCTCGTGCACCGTGCCGGCAGCCGGCAAGCCGACCTTCGCTCTGGGTGAGGACGAGATGGAGATGGGAGTCGGCA TCCATGGCGAGCCAGGACGCCGGCGCGTCAAGCTCGCGCCGGCCGATGCGATCGCCGAGGAGATGATGAGCGCGATCCTG GCCGATCTCGCGGCCAAGCCGGGTACGCCATGCCTGCTGCTGGTCAACGGCTTCGGCGGCACGCCGGCGATGGAGCTCTA TCTGATGACCAATTCAGCGCGCCGGATCCTTGAAGGACGAGGGCTCACGATCGCGCGCGGCCTGGTCGGCTCTTATGTCA CCTCGCTCGACATGGCCGGATGCTCGCTCACCGTGACAGCGCTCGACGATGCAACGCTCCCGCTGTGGGATGCGCCGGTG CACACGGCGGCGTTGCGCTGGGGCTGCTGA
Upstream 100 bases:
>100_bases ACGCCCATGCCGACCGCATCATCACGGGTGTCGCGCGCGGCATCACCGCCCTGATCTCAGCCAATGAAAACAATGACGAT GCCGAACCGGGAGGGACGCC
Downstream 100 bases:
>100_bases GCGGACCGCTGCTCAGCGGATCTCGTTCGAATAATAATGATGCGCCGTCGTCGCGCGGTGCTGGCTCAGGATCGCGAGTG CGCCGGACTGGTCGTAGGCC
Product: dihydroxyacetone kinase subunit DhaK
Products: ADP; glycerone phosphate
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKKLINAVDDVLTESLQGFAAIHGDIVTLGDESKFVRRKSLKPGKVALISGGGSGHEPLHAGFVGQGMLDAACPGQVFTS PTPDQMLAAAQAVETGGGSLFIVKNYEGDVMNFAMAAEMMDAKVATVITDDDVAVETSTYSTGRRGVAGTLVVEKILGAA AEQGRDLDALKALGDDVNKRTRSMGVALTSCTVPAAGKPTFALGEDEMEMGVGIHGEPGRRRVKLAPADAIAEEMMSAIL ADLAAKPGTPCLLLVNGFGGTPAMELYLMTNSARRILEGRGLTIARGLVGSYVTSLDMAGCSLTVTALDDATLPLWDAPV HTAALRWGC
Sequences:
>Translated_329_residues MKKLINAVDDVLTESLQGFAAIHGDIVTLGDESKFVRRKSLKPGKVALISGGGSGHEPLHAGFVGQGMLDAACPGQVFTS PTPDQMLAAAQAVETGGGSLFIVKNYEGDVMNFAMAAEMMDAKVATVITDDDVAVETSTYSTGRRGVAGTLVVEKILGAA AEQGRDLDALKALGDDVNKRTRSMGVALTSCTVPAAGKPTFALGEDEMEMGVGIHGEPGRRRVKLAPADAIAEEMMSAIL ADLAAKPGTPCLLLVNGFGGTPAMELYLMTNSARRILEGRGLTIARGLVGSYVTSLDMAGCSLTVTALDDATLPLWDAPV HTAALRWGC >Mature_329_residues MKKLINAVDDVLTESLQGFAAIHGDIVTLGDESKFVRRKSLKPGKVALISGGGSGHEPLHAGFVGQGMLDAACPGQVFTS PTPDQMLAAAQAVETGGGSLFIVKNYEGDVMNFAMAAEMMDAKVATVITDDDVAVETSTYSTGRRGVAGTLVVEKILGAA AEQGRDLDALKALGDDVNKRTRSMGVALTSCTVPAAGKPTFALGEDEMEMGVGIHGEPGRRRVKLAPADAIAEEMMSAIL ADLAAKPGTPCLLLVNGFGGTPAMELYLMTNSARRILEGRGLTIARGLVGSYVTSLDMAGCSLTVTALDDATLPLWDAPV HTAALRWGC
Specific function: Dihydroxyacetone binding subunit of the dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone. Binds covalently dihydroxyacetone in hemiaminal linkage. Acts also as a corepressor of dhaR by binding to its sensor domain, in the
COG id: COG2376
COG function: function code G; Dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaK domain [H]
Homologues:
Organism=Homo sapiens, GI20149621, Length=338, Percent_Identity=42.8994082840237, Blast_Score=238, Evalue=5e-63, Organism=Escherichia coli, GI87081857, Length=355, Percent_Identity=48.4507042253521, Blast_Score=330, Evalue=7e-92, Organism=Caenorhabditis elegans, GI17565018, Length=322, Percent_Identity=35.0931677018634, Blast_Score=200, Evalue=9e-52, Organism=Saccharomyces cerevisiae, GI6321055, Length=303, Percent_Identity=37.953795379538, Blast_Score=177, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6323570, Length=328, Percent_Identity=37.5, Blast_Score=169, Evalue=5e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004006 - InterPro: IPR012736 [H]
Pfam domain/function: PF02733 Dak1 [H]
EC number: 2.7.1.29
Molecular weight: Translated: 34122; Mature: 34122
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLINAVDDVLTESLQGFAAIHGDIVTLGDESKFVRRKSLKPGKVALISGGGSGHEPLH CHHHHHHHHHHHHHHHHHHEEECCCEEEECCCHHHHHHHCCCCCCEEEEECCCCCCCCCC AGFVGQGMLDAACPGQVFTSPTPDQMLAAAQAVETGGGSLFIVKNYEGDVMNFAMAAEMM CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHH DAKVATVITDDDVAVETSTYSTGRRGVAGTLVVEKILGAAAEQGRDLDALKALGDDVNKR CCEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TRSMGVALTSCTVPAAGKPTFALGEDEMEMGVGIHGEPGRRRVKLAPADAIAEEMMSAIL HHHHCEEEEEEECCCCCCCCEEECCCHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHH ADLAAKPGTPCLLLVNGFGGTPAMELYLMTNSARRILEGRGLTIARGLVGSYVTSLDMAG HHHHCCCCCCEEEEEECCCCCCEEEEEEEECCHHHHHHCCCCEEHHHHHHHHHHHHHCCC CSLTVTALDDATLPLWDAPVHTAALRWGC CEEEEEEECCCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure MKKLINAVDDVLTESLQGFAAIHGDIVTLGDESKFVRRKSLKPGKVALISGGGSGHEPLH CHHHHHHHHHHHHHHHHHHEEECCCEEEECCCHHHHHHHCCCCCCEEEEECCCCCCCCCC AGFVGQGMLDAACPGQVFTSPTPDQMLAAAQAVETGGGSLFIVKNYEGDVMNFAMAAEMM CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHH DAKVATVITDDDVAVETSTYSTGRRGVAGTLVVEKILGAAAEQGRDLDALKALGDDVNKR CCEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TRSMGVALTSCTVPAAGKPTFALGEDEMEMGVGIHGEPGRRRVKLAPADAIAEEMMSAIL HHHHCEEEEEEECCCCCCCCEEECCCHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHH ADLAAKPGTPCLLLVNGFGGTPAMELYLMTNSARRILEGRGLTIARGLVGSYVTSLDMAG HHHHCCCCCCEEEEEECCCCCCEEEEEEEECCHHHHHHCCCCEEHHHHHHHHHHHHHCCC CSLTVTALDDATLPLWDAPVHTAALRWGC CEEEEEEECCCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; glycerone
Specific reaction: ATP + glycerone = ADP + glycerone phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]