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The map label for this gene is yddS [C]

Identifier: 146341510

GI number: 146341510

Start: 4797287

End: 4798006

Strand: Reverse

Name: yddS [C]

Synonym: BRADO4606

Alternate gene names: 146341510

Gene position: 4798006-4797287 (Counterclockwise)

Preceding gene: 146341512

Following gene: 146341509

Centisome position: 64.35

GC content: 66.94

Gene sequence:

>720_bases
ATGCTGTCCGTCACCCGTCGTCATATCCTTGCAGGCTCCGCGCTGGCGCTCGGCGCCTTGCCGCAGGTTTCTCTCGCGGC
CGAGGCGCCAAAGCGAGGCGGCATGCTGCGGATCTCTGTCGACCAGGGTGCGGCCGTGATTCACCCGCTGCTCGCGCGCG
TCAATCCGGAAGCCGCCGCTGGACTGACCGAATGGACCTTCAAGCTTCGTCCGAGCCTGACGTTCCACGATGGCACGCCG
CTGACGTCGGAGGATGTCGTCGCAACCTTCAAGGCGATCCTCGATCCGATAACGGCCTCGCCGGCGCGCACCAATGTCGG
CCCGATCAAGGACGTCGCCGCCGTCGATTCGTCGACCGTAAAGTTCGCGCTCTCGGTCGCCTTCGCCGATTTGCCGGTCG
CACTCGCCTACACGAATGCGCGCATCGTTCCGGCTAAGATCATCGCCAGCGATCTCGGCAGCCTCGCCGCTGGCCGCTGG
GGCACTCGTCGTCACGCTGCCCGTCGCCGTTCCGCTCGGCATGTTTGCCGCAGGGCAGCGCGGCTGACACCATCACCAGC
ATCGTCGCCTATCTCGGCGTCTCGCTGCCGGAGTTCGTCACCGCGACGGTGCTGGCGATGCTGCTCACTGACGTCCTGCC
GTGGTTGCCCGCCACCGGTTACGTGTCGCCGCTCGAGGACTCCGGCCTCGCACTGCGCCACCTCGCGCTTCCCGTTCTGA

Upstream 100 bases:

>100_bases
ACATCGTCGCACTGGCGAAATCGGTACTCGCCTATCTATCAAACGAGTTCAGTCCCGAGCTCTGTCCCGAAACCCGCTCG
CTCTCATAGGACGTCACCCG

Downstream 100 bases:

>100_bases
CGGTCTCGGTCATCCTGGTCGCCCATGTCATGCGCATGATGCGCTCGGAGACTCTGGACGTTCTGCAATCGGACTACGTC
CGCGCGGCGCGGCGAAGGGG

Product: putative dipeptide ABC transporter (fragment), periplasmic binding protein

Products: NA

Alternate protein names: Peptide ABC Transporter

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MLSVTRRHILAGSALALGALPQVSLAAEAPKRGGMLRISVDQGAAVIHPLLARVNPEAAAGLTEWTFKLRPSLTFHDGTP
LTSEDVVATFKAILDPITASPARTNVGPIKDVAAVDSSTVKFALSVAFADLPVALAYTNARIVPAKIIASDLGSLAAGRW
GTRRHAARRRSARHVCRRAARLTPSPASSPISASRCRSSSPRRCWRCCSLTSCRGCPPPVTCRRSRTPASHCATSRFPF

Sequences:

>Translated_239_residues
MLSVTRRHILAGSALALGALPQVSLAAEAPKRGGMLRISVDQGAAVIHPLLARVNPEAAAGLTEWTFKLRPSLTFHDGTP
LTSEDVVATFKAILDPITASPARTNVGPIKDVAAVDSSTVKFALSVAFADLPVALAYTNARIVPAKIIASDLGSLAAGRW
GTRRHAARRRSARHVCRRAARLTPSPASSPISASRCRSSSPRRCWRCCSLTSCRGCPPPVTCRRSRTPASHCATSRFPF
>Mature_239_residues
MLSVTRRHILAGSALALGALPQVSLAAEAPKRGGMLRISVDQGAAVIHPLLARVNPEAAAGLTEWTFKLRPSLTFHDGTP
LTSEDVVATFKAILDPITASPARTNVGPIKDVAAVDSSTVKFALSVAFADLPVALAYTNARIVPAKIIASDLGSLAAGRW
GTRRHAARRRSARHVCRRAARLTPSPASSPISASRCRSSSPRRCWRCCSLTSCRGCPPPVTCRRSRTPASHCATSRFPF

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Yddopqrs. [C]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25367; Mature: 25367

Theoretical pI: Translated: 11.89; Mature: 11.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVTRRHILAGSALALGALPQVSLAAEAPKRGGMLRISVDQGAAVIHPLLARVNPEAAA
CCCCHHHHHHHCCHHHHCCCCCHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHC
GLTEWTFKLRPSLTFHDGTPLTSEDVVATFKAILDPITASPARTNVGPIKDVAAVDSSTV
CHHHEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHH
KFALSVAFADLPVALAYTNARIVPAKIIASDLGSLAAGRWGTRRHAARRRSARHVCRRAA
HHHHHHHHHHCCEEEEECCCEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RLTPSPASSPISASRCRSSSPRRCWRCCSLTSCRGCPPPVTCRRSRTPASHCATSRFPF
HCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MLSVTRRHILAGSALALGALPQVSLAAEAPKRGGMLRISVDQGAAVIHPLLARVNPEAAA
CCCCHHHHHHHCCHHHHCCCCCHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHC
GLTEWTFKLRPSLTFHDGTPLTSEDVVATFKAILDPITASPARTNVGPIKDVAAVDSSTV
CHHHEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHH
KFALSVAFADLPVALAYTNARIVPAKIIASDLGSLAAGRWGTRRHAARRRSARHVCRRAA
HHHHHHHHHHCCEEEEECCCEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RLTPSPASSPISASRCRSSSPRRCWRCCSLTSCRGCPPPVTCRRSRTPASHCATSRFPF
HCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA